Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq4423 104 5e-18 >seq4423 Length=667 Score = 104 bits (114), Expect = 5e-18 Identities = 192/277 (69%), Gaps = 16/277 (6%) Strand=Plus/Minus Query 13252 GGCGGTGCCATAACCACGCAGCCTGCGCTGTCACCGTTCTGCGTACCTTTTGCCGGGTCA 13311 || || || || ||||| ||| |||||||| ||||| | || |||||||| Sbjct 658 GGGGGAGCGATTACCACCATGCCCGCGCTGTCGCCGTTTTCCG---------CCGGGTCA 608 Query 13312 TAACCGATCCACACTTCGCGCCAGCCAAACGGGCGCAGCGCC--AGCGCCTGAAAA--TC 13367 || || | ||| || | ||| || ||||| || ||| | || | || | || Sbjct 607 TAGCCCACCCAGACCTGGCGATCACCGAACGGCCGT-GCGGCGAAGGGTTTGTAGTCCTC 549 Query 13368 GGTCCAGACTTCCCAGCTGTCCACCATGCACGCCTGCAGC-TCGCTGAGCGGGAACACGG 13426 | ||||| ||||| |||||||||||||| | ||||| | |||| || ||||| | | Sbjct 548 TGCCCAGAGGTCCCAACTGTCCACCATGCAGGGCTGCAACATCGCC-AGGGGGAAGATGC 490 Query 13427 ACGCGAGATCGTCCACGAACTCACACATCAGCAGGTTCTGGTATTCGTCCGGGCTGTACT 13486 ||| ||||| | ||||| |||||||||||||||||| | | || | | ||||| Sbjct 489 TCGCCCCGTCGTCGATGAACTGGCACATCAGCAGGTTCTGGAAGGCCTCGGCGTCGTACT 430 Query 13487 CCATGCGCAGCTGGTCGAGGTCGAACAGGTTACAGCC 13523 | | | ||||| ||| ||||||||||| | |||||| Sbjct 429 CAAGCCTCAGCTCGTCCAGGTCGAACAGATCACAGCC 393 Score = 80.6 bits (88), Expect = 6e-11 Identities = 142/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 13641 GCCCCGGTTAAACAGCGCACCGGACCAGAACGGATAAGCACTGTGGGTCAGGCTGGAGGG 13700 |||| ||| || || | |||| |||||| | || || ||| | || ||| || || Sbjct 209 GCCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCGTGTGCCATGCTCGATGG 150 Query 13701 CGTGGAAAAATAGGTTTGTCGCCATTTTTTGTGAATGGCCATACCGGAAGCCACTTTGCG 13760 ||| || || ||||| | || | | || || || ||||| ||| || || ||| Sbjct 149 CGTCGAGAAGTAGGTCCGGCGGTACTGCTTCTGCATCGCCATGCCGCTGGCGACCTTGTT 90 Query 13761 CAGTTCCTGGAATTTTGGTATCCAGAAATATTCATCCAGGTACAGATTACCGTGATAGCT 13820 ||||||| ||| || ||||||| |||| || | ||| | || |||||||||| Sbjct 89 GAGTTCCTTGAACTTGAAGGTCCAGAAGAATTCGTCGAAGTAGAAGTTGCCGTGATAGCC 30 Query 13821 CTGCGCCGTGCGGGCGTTGGTGCCGAG 13847 ||| || || ||||||||||| || || Sbjct 29 CTGGGCGGTCCGGGCGTTGGTCCCCAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109034343631496