Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2468 129 1e-24 >seq2468 Length=4028 Score = 129 bits (142), Expect = 1e-24 Identities = 254/371 (68%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || || | ||| ||||| || || || || || ||||| ||| Sbjct 3169 CCAGGCATGAGTCCACGCTTCTTCAACCAAAAAATGGCAGCAAACGATCCGGAGAAAAAG 3228 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || || ||||| || || || ||| | | | ||| || ||||| ||||| ||| Sbjct 3229 ATTCCTTCCACGGCAGCAAAAGCGATCACGCGAATTCCAAACGAAGCATTCTTATCTCCA 3288 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || |||||||| || |||||||| ||||| || | | | || || Sbjct 3289 ATCCATCGGAGAGCCCAGTCGGCTTTCTTCTTAATGCAGGGAAACTCTTGAATAGCATTA 3348 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 |||||| | || | |||| | || | ||| || | || || ||||| |||||| Sbjct 3349 AAGAGCGTGTTCCTCTCAGTTAGATCGGTAACGTATGCTTCGATCATCTTTGAATACATC 3408 Query 48431 TCAGAGTGCACATTC--TCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 || || || | ||| || | || |||||||| | |||||| | || ||| || Sbjct 3409 TCGGAATGAA--TTCCTTCGACGGCAATCTGGAAACTGTAGAACGAGAGCGCTTCAGGCA 3466 Query 48489 CCTGCACTTC-TGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 || |||||| |||| | |||| ||| | ||||| || || || || |||||||||||| Sbjct 3467 TCTTCACTTCCTGTGTA-AATCGCTCAACGAGATTTTCGTTTACGATTCCATCTGAAGCA 3525 Query 48548 GCAAAGAAGGC 48558 ||||| || || Sbjct 3526 GCAAAAAACGC 3536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931366847431680