Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq10737 179 9e-41 seq2795 132 1e-26 seq6751 87.8 4e-13 >seq10737 Length=14001 Score = 179 bits (198), Expect = 9e-41 Identities = 1185/1868 (63%), Gaps = 92/1868 (5%) Strand=Plus/Plus Query 13986 TCGTATGCGTTTGGCGG---GGTAACCAACACTGCAGCGCAAGGCTACCCGGTGCCTCTG 14042 || ||||| ||||| || ||| | | || |||| || || |||| || || || Sbjct 7688 TCATATGCCTTTGGTGGCCCGGTTAACTCCATTGCA---CAGGGAAACCCCGTTCCGTTG 7744 Query 14043 CTTTATGGTAAGCGTCGAATCGGCGGAGCGATTATTTCTGCCGGAATTTATGTCGAAGAT 14102 || || |||| || ||||| || || || ||||| || || ||||| | |||||| Sbjct 7745 GGGTACGGCCAGCGCCGCATCGGGGGTGCCATCATTTCGGCGGGCATTTACGCCGAAGAC 7804 Query 14103 CAGCAGTAGATAACTAACC----TTTTT---TCTGGCCACCTTCGGGTGGCTTTTTT-AT 14154 ||||| ||||| | | ||||| || || | | || || ||||||||| || Sbjct 7805 CAGCA----ATAACGCATCATTGTTTTTCAGTCAGGTCGC--TCAGGCGGCTTTTTTTAT 7858 Query 14155 GGGCGCAATATGGCTACAGATAAAGTGTTAAAAGGCCGCAAGGGCGGCAGCTCAAGTTCC 14214 ||| | | ||||| |||| | | | | ||| |||||||||||| |||| | Sbjct 7859 GGGTGAACTATGGG-ACAGC--ATCTTATTCAGGGCAGCAAGGGCGGCAATGAAAGTCCA 7915 Query 14215 CGAACTCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAAATCCTCGTT 14274 || || || |||| ||| ||| |||||||| || | || |||||| | | Sbjct 7916 CGCACGCCGGTCGAATCGCCGGATTCCCTGCAATCGACCTCGTATGCCAAAATCGTATTG 7975 Query 14275 GCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTCACCGGCAAAGATATCTACCTGGACGGA 14334 ||||| ||||||||||||||||| || ||| | ||||| |||||| ||||| Sbjct 7976 GCGCTGGGGGAAGGTGAGTTTGCGGGCGGGCTGAACGGCACTAATATCTTTCTGGATAAC 8035 Query 14335 ACAGCGCTGGAGAATGCTGACGG-CTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCG 14393 || ||||| | | || || | |||| || || ||||| | |||||| || || Sbjct 8036 ACCCCGCTGATTGGTCCCGAGGGTCAGGCAAACTTTGAG-GGGGTGAAGTGGGAATTCCG 8094 Query 14394 CGCGGGAACTCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAG 14453 | | || || | ||| | ||||||| || || |||| ||||| || | | Sbjct 8095 CCCCGGTACGCCCCATCAAGACTATATTCCCGGCATGCCCGCCGTGGAAAATGAACTGAC 8154 Query 14454 CGTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCT 14513 ||| || ||||| || || || || ||| | || | |||||||| || || Sbjct 8155 CGTCGGGACTGA---ATTAAATGAGTCA---TGGGTCAGATCGGTCACCAATACCCAACT 8208 Query 14514 TTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTTC---AAACAGGAAGACGACGG 14570 || || || ||||| || | ||||| || || |||||| |||| ||||| Sbjct 8209 GTCGGCGGTGCGCCTTCGGTTATCCTGGCC---GCAATTGCAGAAACAGAAAGAAGACGG 8265 Query 14571 CGATCTGGTGGGTTACTCGG-TCAATTATGCGATTGACCTACAGACGGACGGCGGCACAT 14629 || ||| || || ||| | ||||| |||||| | ||||| || || | | Sbjct 8266 GGACACGGTCGGCTA-TCGCATTGATTATCTGATTGAAGTGGCCACGGATGGGGGGGCGT 8324 Query 14630 GGCAGACGGTACTCAATACCAGC-GTGACCGGAAAAACGACGTCTGGTTATGAGCGCAGC 14688 ||| | ||| || | || ||| || || || || | ||||| || Sbjct 8325 ATCAGGAGTTACCCACG-CTGGCTGTGGATGGCAAGACTACCACCAAATATGAACGGTCA 8383 Query 14689 CACCGTATCGATTTACCGCAGGCTGGCAGCACCTGGACAATACGTCTGCGTAAGATTACC 14748 ||||| |||||||||| | || || |||| | || | || | | Sbjct 8384 CACCGCGTCGATTTACCCAAAGCC--CATT--CTGGCTGGCAGGTGCGGGTTCGC---CG 8436 Query 14749 TCTGACGCC--AACAGCGCG--AA---GATCGGCGACACGATGAT-GCTGCAGAGCTTCA 14800 ||||| || ||||| | || ||| | ||| ||||| | | || || || | Sbjct 8437 CCTGACCCCCAAACAGACCAGTAACCGGATTGCCGATGCGATGGTCGTTGAAGCCATT-A 8495 Query 14801 CCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTCG 14860 |||||||||||||||| |||||| | ||||| | ||||| | | | ||| | || | Sbjct 8496 CCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTTG 8555 Query 14861 ACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTTA 14920 | | | |||||| || ||| || || | || || ||||| ||| ||| Sbjct 8556 ATGCCAAACAGTTCC---GCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATTA 8612 Query 14921 TCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTG 14980 |||| || || |||| || || || || ||||| ||| || ||| | || | Sbjct 8613 TCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGGG 8672 Query 14981 CGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTG 15040 | ||||| ||||| ||||| || || || |||||||| | || |||||| | | || Sbjct 8673 CCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAATG 8732 Query 15041 ACCGGTTTGGCCTCGGGCACCGTTTGACCGCTGCGAATATTGAT------AAATGGACTC 15094 ||||||| || | || ||| ||| |||| |||| | | |||||| | Sbjct 8733 ACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGACC 8792 Query 15095 TTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTA 15154 | || | |||| | | | ||||| ||| ||| || || ||||||||||| | || Sbjct 8793 TGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGGGAT-GGAG 8851 Query 15155 CAGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCC 15214 | || ||| |||||||| || || |||||| | | ||||||| || |||| Sbjct 8852 CCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTCC 8906 Query 15215 TGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCAGAT---TG 15271 |||| ||| ||| || ||||||| |||||||||| ||||| || | || || Sbjct 8907 TGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAATG 8966 Query 15272 TGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTGTTG 15331 || ||||| || ||||| ||| || |||| | || || ||||| ||||| | Sbjct 8967 TG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGGG 9023 Query 15332 GCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTTT 15391 |||| || |||||||| || || | ||||| || ||| |||| ||| |||| Sbjct 9024 ACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTGA 9083 Query 15392 CATGGTCAGATCCGGGTAACGCTTATGCCGACGCAATGGAGCCGGTATTTGAGCAGGCGC 15451 |||||||||||| |||| |||| || || |||| |||| || || | | Sbjct 9084 GCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAGT 9143 Query 15452 TGGTGGCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGT 15511 | || || || | || ||| ||| || || || || ||||||||| ||||| Sbjct 9144 TAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAGA 9203 Query 15512 CAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAACAACAAGGATCGCGTTGTT 15570 ||||| | || | ||| ||||| | | |||||| | | || || | || Sbjct 9204 GTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATGGTC 9262 Query 15571 TCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCA 15630 | ||| || |||||||| || |||||| ||| || || || |||| ||||| Sbjct 9263 ACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGCG 9322 Query 15631 GACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCG 15688 || | ||| ||| ||||| || |||| || || |||||||| | | | || || Sbjct 9323 GATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGTA 9380 Query 15689 TTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACATGC 15748 ||||| || ||| | || || ||| | || || || | || || ||| ||| Sbjct 9381 ATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTGC 9440 Query 15749 CTTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTCACA 15804 | || || | | || || | | || |||||||| ||||| ||||| | | |||| Sbjct 9441 CGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TCACG 9496 Query 15805 GTCACCAC 15812 |||||||| Sbjct 9497 GTCACCAC 9504 Score = 84.2 bits (92), Expect = 5e-12 Identities = 227/345 (66%), Gaps = 3/345 (1%) Strand=Plus/Plus Query 12490 ATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGGCGTGGTGGCGC 12549 ||||||| ||| | ||||| | | | ||||| || ||| || || || ||||| | Sbjct 6521 ATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTTGGTGATTC 6580 Query 12550 AAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAGAAC 12609 |||| || || | || ||||| | | || | || ||| || || || || | Sbjct 6581 AAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACCCACCGAGC 6640 Query 12610 ATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCA 12669 | ||| ||| || ||||| || || || || || ||| || | | |||| Sbjct 6641 AATTTTGCCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTATTGTTGCCA 6700 Query 12670 TCGTTCACAGTCACCCTGACGCCACTACGCAGCCGAGCGAACTGGATAAAGCGCAATGCG 12729 |||| ||||||||||| |||||||| || ||||| ||| ||||||||| || ||||| | Sbjct 6701 TCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCGCACAATGTG 6760 Query 12730 ACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCC 12789 || | | | || ||| |||| ||||||||||| ||| | || ||||| Sbjct 6761 ACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTCGAACCATTA 6820 Query 12790 AGCCG--CG-CGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGC 12831 |||| || |||| |||||| ||| || ||||| |||| Sbjct 6821 TGCCGACCGAGGGAGTTAAACCACTGTTGGGCCGCCCGTTCGTGC 6865 >seq2795 Length=11366 Score = 132 bits (146), Expect = 1e-26 Identities = 145/190 (76%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 32399 AATGGCTAACCTACGCAAAGAAGCACGCGGCAGAGAATGCCAGGTACGTATTTACGGCGT 32458 |||||| || |||||||||||||| || || ||||||| ||||| | || ||| | Sbjct 3919 AATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCAT 3860 Query 32459 ATGCAATGGCAACCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGG 32518 || || || ||| ||||| ||||||||| ||||||||||||||||| ||||| || Sbjct 3859 CTGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGG 3800 Query 32519 AACGGGAATGAAGCCTGACGACCTGATCGGCGCATGGGCTTGTAGCGCGT-GTCACGATG 32577 | ||| ||||| || | || ||| | || |||||||| ||| || || ||||||||| Sbjct 3799 CATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTT-CGTGTTGTCACGATG 3741 Query 32578 AAATCGACCG 32587 |||| ||||| Sbjct 3740 AAATAGACCG 3731 >seq6751 Length=980 Score = 87.8 bits (96), Expect = 4e-13 Identities = 202/299 (68%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 1104 GATGGTCTGAACATCCACTGCGCTATCGTAGACGAGCTGCATGCTCACAAAACCCGTGAC 1163 || || |||||| | ||| |||| ||| || ||| |||| || ||||| | || ||| Sbjct 297 GACGGCCTGAACGTGCACGGCGCGGCCGTGGATGAGGTGCACGCGCACAAGAAGCGCGAC 356 Query 1164 GTCTGGGACGTTCTGGAGACGGCAACCGGTGCGCGTCTGCAATCGCTGCTTTTCGGT-AT 1222 | ||||| || | ||| |||| |||||| || || |||| | | |||| || Sbjct 357 CTGTGGGATGTGATCGAGTCGGCTGACGGTGCCCGCAGTCAGCCGCT-CATCTCGGCCAT 415 Query 1223 CACCACCGCCGGTTTCAACAAAGAAGGCATCTGCTACGAATTGCGTGATTACGCCATCAA 1282 |||||| ||||| ||| | ||||| |||| ||| |||| ||| ||||||| Sbjct 416 CACCACGGCCGGCAAGGACACGGGCGGCATTTGCTTCGAGCTGCGCAGCTACACCATCAA 475 Query 1283 GGTGCTGCGTGGGCTGGTA-AAAGACGATACGTTTTTTGCCATTATCTACACCTTAGATG 1341 ||||||| | ||| | | || || |||| || | | ||||||||| | || | Sbjct 476 GGTGCTG-GAGGGAACGCACGTCGATGAGACGTGGTTCGGGGTGATCTACACCATCGACG 534 Query 1342 AAGGTGACGATCCCTTTGATGAAAAAGTCTGGCAGAAGGCGAATCCGGGGCTGGGTATC 1400 | || |||||| ||| ||| ||||||| |||||||||||| ||||| ||| Sbjct 535 AGGGCGACGATTGGAAAGATCCAAAGGTCTGGCGCAAGGCGAATCCGAACCTGGGCATC 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120162060030168