Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq10737 176 1e-39 >seq10737 Length=14001 Score = 176 bits (194), Expect = 1e-39 Identities = 1185/1871 (63%), Gaps = 98/1871 (5%) Strand=Plus/Plus Query 14312 TCGTATGCGTTTGGCGG---GGTAACCAACACTGCAGCGCAAGGCTACCCGGTGCCTCTG 14368 || ||||| ||||| || ||| | | || |||| || || |||| || || || Sbjct 7688 TCATATGCCTTTGGTGGCCCGGTTAACTCCATTGCA---CAGGGAAACCCCGTTCCGTTG 7744 Query 14369 CTTTATGGTAAGCGTCGAATCGGCGGAGCGATTATTTCTGCCGGAATTTATGTCGAAGAT 14428 || || |||| || ||||| || || || ||||| || || ||||| | |||||| Sbjct 7745 GGGTACGGCCAGCGCCGCATCGGGGGTGCCATCATTTCGGCGGGCATTTACGCCGAAGAC 7804 Query 14429 CAGCAGTAGATAACTAACC----TTTTT---TCTGGCCACCTTCGGGTGGCTTTTTT-AT 14480 ||||| ||||| | | ||||| || || | | || || ||||||||| || Sbjct 7805 CAGCA----ATAACGCATCATTGTTTTTCAGTCAGGTCGC--TCAGGCGGCTTTTTTTAT 7858 Query 14481 GGGCGCAATATGGCTACAGATAAAGTGTTAAAAGGCCGCAAGGGCGGCAGCTCAAGTTCC 14540 ||| | | ||||| |||| | | | | ||| |||||||||||| |||| | Sbjct 7859 GGGTGAACTATGGG-ACAGC--ATCTTATTCAGGGCAGCAAGGGCGGCAATGAAAGTCCA 7915 Query 14541 CGAACCCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAGATCCTCGTT 14600 || || || |||| ||| ||| |||||||| || | || || ||| | | Sbjct 7916 CGCACGCCGGTCGAATCGCCGGATTCCCTGCAATCGACCTCGTATGCCAAAATCGTATTG 7975 Query 14601 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14660 ||||| |||||||| |||||||| || ||| | ||| | |||||| ||||| Sbjct 7976 GCGCTGGGGGAAGGTGAGTTTGCGGGCGGGCTGAACGGCACTAATATCTTTCTGGATAAC 8035 Query 14661 ACAGCGCTGGAGAATGCTGACGG-CTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCG 14719 || ||||| | | || || | |||| || || ||||| | |||||| || || Sbjct 8036 ACCCCGCTGATTGGTCCCGAGGGTCAGGCAAACTTTGAG-GGGGTGAAGTGGGAATTCCG 8094 Query 14720 CGCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAG 14779 | | || |||| ||| | ||||||| || || |||| ||||| || | | Sbjct 8095 CCCCGGTACGCCCCATCAAGACTATATTCCCGGCATGCCCGCCGTGGAAAATGAACTGAC 8154 Query 14780 CGTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCT 14839 ||| || ||||| || || || || ||| | || | |||||||| || || Sbjct 8155 CGTCGGGACTGA---ATTAAATGAGTCA---TGGGTCAGATCGGTCACCAATACCCAACT 8208 Query 14840 TTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTTC---AAACAGGAAGACGACGG 14896 || || || ||||| || | ||||| || || |||||| |||| ||||| Sbjct 8209 GTCGGCGGTGCGCCTTCGGTTATCCTGGCC---GCAATTGCAGAAACAGAAAGAAGACGG 8265 Query 14897 CGATCTGGTGGGTTACTCGG-TCAATTATGCGATTGACCTGCAGACGGACGGCGGCACAT 14955 || ||| || || ||| | ||||| |||||| || ||||| || || | | Sbjct 8266 GGACACGGTCGGCTA-TCGCATTGATTATCTGATTGAAGTGGCCACGGATGGGGGGGCGT 8324 Query 14956 GGCAGACGGTACTCAATACCAGC-GTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGC 15014 ||| | ||| || | || ||| ||||| || || | ||||| || Sbjct 8325 ATCAGGAGTTACCCACG-CTGGCTGTGGATGGCAAGACTACCACCAAATATGAACGGTCA 8383 Query 15015 CACCGTATCGATTTACCGCAGGCTGGCAGCACAT---GGACAATACGTCTGCGTAAGATT 15071 ||||| |||||||||| | ||| ||| || | || | || | Sbjct 8384 CACCGCGTCGATTTACCCAA-------AGCCCATTCTGGCTGGCAGGTGCGGGTTCGC-- 8434 Query 15072 ACCTCTGACGCC--AACAGCGCG--AA---GATCGGCGACACGATGAT-GCTGCAGAGCT 15123 | ||||| || ||||| | || ||| | ||| ||||| | | || || | Sbjct 8435 -CGCCTGACCCCCAAACAGACCAGTAACCGGATTGCCGATGCGATGGTCGTTGAAGCCAT 8493 Query 15124 TCACCGAGGTGATTGATGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAAT 15183 | |||||||||||||| || |||||| | ||||| | ||||| | | | ||| | | Sbjct 8494 T-ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGT 8552 Query 15184 TCGACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCG 15243 | || | | |||||| || ||| || || | || || ||||| ||| Sbjct 8553 TTGATGCCAAACAGTTCC---GCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCA 8609 Query 15244 TTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCG 15303 ||||||| || || |||| || || || || ||||| ||| || ||| | | Sbjct 8610 TTATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAG 8669 Query 15304 GTGCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTT 15363 | || ||||| ||||| ||||| || || || |||||||| | || |||||| | | Sbjct 8670 GGGCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCA 8729 Query 15364 CTGACCGGTTTGGCCTCGGGCACCGTTTGACCGCTGCGAATATTGAT------AAATGGA 15417 ||||||||| || | || ||| ||| |||| |||| | | |||||| Sbjct 8730 ATGACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGG 8789 Query 15418 CTCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACG 15477 || || | |||| | | | ||||| ||| ||| || || ||||||||||| | | Sbjct 8790 ACCTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGGGAT-G 8848 Query 15478 GTACAGAACCACGCTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAG 15537 | | || ||| |||||||| || || |||||| | | ||||||| || | Sbjct 8849 GAGCCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTG 8903 Query 15538 TCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCAGAT-- 15595 ||||||| ||| ||| || ||||||| |||||||||| ||||| || | || Sbjct 8904 TCCTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGA 8963 Query 15596 -TGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTG 15654 |||| ||||| || ||||| ||| || |||| | || || ||||| ||||| Sbjct 8964 ATGTG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGC 9020 Query 15655 TTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGG 15714 | |||| || |||||||| || || | ||||| || ||| |||| ||| ||| Sbjct 9021 GGGACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGG 9080 Query 15715 TTTCATGGTCAGATCCGGGTAACGCTTATGCCGACGCAATGGAGCCGGTATTTGAGCAGG 15774 | |||||||||||| |||| |||| || || |||| |||| || || | Sbjct 9081 TGAGCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTC 9140 Query 15775 CGCTGGTGGCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGC 15834 | | || || || | || ||| ||| || || || || ||||||||| ||| Sbjct 9141 AGTTAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGC 9200 Query 15835 AGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAACAACAAGGATCGCGTT 15893 || ||||| | || | ||| ||||| | | |||||| | | || || | Sbjct 9201 AGAGTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATG 9259 Query 15894 GTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTG 15953 || | ||| || |||||||| || |||||| ||| || || || |||| ||| Sbjct 9260 GTCACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTG 9319 Query 15954 GCAGACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTC 16011 || || | ||| ||| ||||| || |||| || || |||||||| | | | || | Sbjct 9320 GCGGATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGAC 9377 Query 16012 GCGTTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACC 16071 | ||||| || ||| | || || ||| | || || || | || || |||| Sbjct 9378 GTAATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACC 9437 Query 16072 TGCCTTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTC 16127 |||| || || | | || || | | || |||||||| ||||| ||||| | | || Sbjct 9438 TGCCGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TC 9493 Query 16128 ACAGTCACCAC 16138 || |||||||| Sbjct 9494 ACGGTCACCAC 9504 Score = 102 bits (112), Expect = 2e-17 Identities = 274/414 (66%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 12757 TTTGGTGGCTTCCCGGGCACGTCTTTGATCAGGAG------TTGATATGCGTCAGAAAAC 12810 |||||||||||||| ||| | | ||| | ||| | | ||||| | | ||| | Sbjct 6453 TTTGGTGGCTTCCCCGGCTCTGCATTGTTAAGGCGGTGAGATGGATATACTGCGAAAATC 6512 Query 12811 CATCG---ATGCGATTATGGCGCATGCCGCCGCTGAATATCCTCGTGAGTGCTGCGGTGT 12867 || | ||||||| ||| | ||||||| | ||||| || ||| ||||| ||| | Sbjct 6513 GATGGTGAATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTT 6572 Query 12868 GGTGGCGCAAAAAAGCCGTGTTGAACGTTATTTTCCTTGCCGGAATCTTGCCGCTGCGCC 12927 |||| ||||| || || | ||| | | ||||| ||| ||| | | || Sbjct 6573 GGTGATTCAAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACC 6632 Query 12928 GAAGGA-AAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGTACGG 12986 | || ||||||| |||| || ||||||||||| || || || ||| || Sbjct 6633 CACCGAGCAATTTTG-CCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTA 6691 Query 12987 TGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCCGAGCGAACTGGATAAAG 13046 | | |||||||| ||||||||||| |||||||| || ||||| ||| ||||||||| | Sbjct 6692 TTGTTGCCATCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCG 6751 Query 13047 CGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTAC 13106 | ||||| ||| | | | || ||| |||| ||||||||||| ||| | | Sbjct 6752 CACAATGTGACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTC 6811 Query 13107 GCACCATCCAGCCG--CG-CGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGC 13157 | ||||| |||| || |||| |||||| ||| || ||||| |||| Sbjct 6812 GAACCATTATGCCGACCGAGGGAGTTAAACCACTGTTGGGCCGCCCGTTCGTGC 6865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124740485034912