Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq10737 176 1e-39 >seq10737 Length=14001 Score = 176 bits (194), Expect = 1e-39 Identities = 1185/1871 (63%), Gaps = 98/1871 (5%) Strand=Plus/Plus Query 14264 TCGTATGCGTTTGGCGG---GGTAACCAACACTGCAGCGCAAGGCTACCCGGTGCCTCTG 14320 || ||||| ||||| || ||| | | || |||| || || |||| || || || Sbjct 7688 TCATATGCCTTTGGTGGCCCGGTTAACTCCATTGCA---CAGGGAAACCCCGTTCCGTTG 7744 Query 14321 CTTTATGGTAAGCGTCGAATCGGCGGAGCGATTATTTCTGCCGGAATTTATGTCGAAGAT 14380 || || |||| || ||||| || || || ||||| || || ||||| | |||||| Sbjct 7745 GGGTACGGCCAGCGCCGCATCGGGGGTGCCATCATTTCGGCGGGCATTTACGCCGAAGAC 7804 Query 14381 CAGCAGTAGATAACTAACC----TTTTT---TCTGGCCACCTTCGGGTGGCTTTTTT-AT 14432 ||||| ||||| | | ||||| || || | | || || ||||||||| || Sbjct 7805 CAGCA----ATAACGCATCATTGTTTTTCAGTCAGGTCGC--TCAGGCGGCTTTTTTTAT 7858 Query 14433 GGGCGCAATATGGCTACAGATAAAGTGTTAAAAGGCCGCAAGGGCGGCAGCTCAAGTTCC 14492 ||| | | ||||| |||| | | | | ||| |||||||||||| |||| | Sbjct 7859 GGGTGAACTATGGG-ACAGC--ATCTTATTCAGGGCAGCAAGGGCGGCAATGAAAGTCCA 7915 Query 14493 CGAACCCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAGATCCTCGTT 14552 || || || |||| ||| ||| |||||||| || | || || ||| | | Sbjct 7916 CGCACGCCGGTCGAATCGCCGGATTCCCTGCAATCGACCTCGTATGCCAAAATCGTATTG 7975 Query 14553 GCGCTTGGGGAAGGGGAGTTTGCTGGACAGCTCACCGGGAAGGATATCTACCTGGACGGA 14612 ||||| |||||||| |||||||| || ||| | ||| | |||||| ||||| Sbjct 7976 GCGCTGGGGGAAGGTGAGTTTGCGGGCGGGCTGAACGGCACTAATATCTTTCTGGATAAC 8035 Query 14613 ACAGCGCTGGAGAATGCTGACGG-CTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCG 14671 || ||||| | | || || | |||| || || ||||| | |||||| || || Sbjct 8036 ACCCCGCTGATTGGTCCCGAGGGTCAGGCAAACTTTGAG-GGGGTGAAGTGGGAATTCCG 8094 Query 14672 CGCGGGAACGCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAG 14731 | | || |||| ||| | ||||||| || || |||| ||||| || | | Sbjct 8095 CCCCGGTACGCCCCATCAAGACTATATTCCCGGCATGCCCGCCGTGGAAAATGAACTGAC 8154 Query 14732 CGTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCT 14791 ||| || ||||| || || || || ||| | || | |||||||| || || Sbjct 8155 CGTCGGGACTGA---ATTAAATGAGTCA---TGGGTCAGATCGGTCACCAATACCCAACT 8208 Query 14792 TTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTTC---AAACAGGAAGACGACGG 14848 || || || ||||| || | ||||| || || |||||| |||| ||||| Sbjct 8209 GTCGGCGGTGCGCCTTCGGTTATCCTGGCC---GCAATTGCAGAAACAGAAAGAAGACGG 8265 Query 14849 CGATCTGGTGGGTTACTCGG-TCAATTATGCGATTGACCTGCAGACGGACGGCGGCACAT 14907 || ||| || || ||| | ||||| |||||| || ||||| || || | | Sbjct 8266 GGACACGGTCGGCTA-TCGCATTGATTATCTGATTGAAGTGGCCACGGATGGGGGGGCGT 8324 Query 14908 GGCAGACGGTACTCAATACCAGC-GTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGC 14966 ||| | ||| || | || ||| ||||| || || | ||||| || Sbjct 8325 ATCAGGAGTTACCCACG-CTGGCTGTGGATGGCAAGACTACCACCAAATATGAACGGTCA 8383 Query 14967 CACCGTATCGATTTACCGCAGGCTGGCAGCACAT---GGACAATACGTCTGCGTAAGATT 15023 ||||| |||||||||| | ||| ||| || | || | || | Sbjct 8384 CACCGCGTCGATTTACCCAA-------AGCCCATTCTGGCTGGCAGGTGCGGGTTCGC-- 8434 Query 15024 ACCTCTGACGCC--AACAGCGCG--AA---GATCGGCGACACGATGAT-GCTGCAGAGCT 15075 | ||||| || ||||| | || ||| | ||| ||||| | | || || | Sbjct 8435 -CGCCTGACCCCCAAACAGACCAGTAACCGGATTGCCGATGCGATGGTCGTTGAAGCCAT 8493 Query 15076 TCACCGAGGTGATTGATGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAAT 15135 | |||||||||||||| || |||||| | ||||| | ||||| | | | ||| | | Sbjct 8494 T-ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGT 8552 Query 15136 TCGACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCG 15195 | || | | |||||| || ||| || || | || || ||||| ||| Sbjct 8553 TTGATGCCAAACAGTTCC---GCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCA 8609 Query 15196 TTATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCG 15255 ||||||| || || |||| || || || || ||||| ||| || ||| | | Sbjct 8610 TTATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAG 8669 Query 15256 GTGCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTT 15315 | || ||||| ||||| ||||| || || || |||||||| | || |||||| | | Sbjct 8670 GGGCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCA 8729 Query 15316 CTGACCGGTTTGGCCTCGGGCACCGTTTGACCGCTGCGAATATTGAT------AAATGGA 15369 ||||||||| || | || ||| ||| |||| |||| | | |||||| Sbjct 8730 ATGACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGG 8789 Query 15370 CTCTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACG 15429 || || | |||| | | | ||||| ||| ||| || || ||||||||||| | | Sbjct 8790 ACCTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGGGAT-G 8848 Query 15430 GTACAGAACCACGCTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAG 15489 | | || ||| |||||||| || || |||||| | | ||||||| || | Sbjct 8849 GAGCCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTG 8903 Query 15490 TCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCAGAT-- 15547 ||||||| ||| ||| || ||||||| |||||||||| ||||| || | || Sbjct 8904 TCCTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGA 8963 Query 15548 -TGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTG 15606 |||| ||||| || ||||| ||| || |||| | || || ||||| ||||| Sbjct 8964 ATGTG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGC 9020 Query 15607 TTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGG 15666 | |||| || |||||||| || || | ||||| || ||| |||| ||| ||| Sbjct 9021 GGGACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGG 9080 Query 15667 TTTCATGGTCAGATCCGGGTAACGCTTATGCCGACGCAATGGAGCCGGTATTTGAGCAGG 15726 | |||||||||||| |||| |||| || || |||| |||| || || | Sbjct 9081 TGAGCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTC 9140 Query 15727 CGCTGGTGGCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGC 15786 | | || || || | || ||| ||| || || || || ||||||||| ||| Sbjct 9141 AGTTAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGC 9200 Query 15787 AGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAACAACAAGGATCGCGTT 15845 || ||||| | || | ||| ||||| | | |||||| | | || || | Sbjct 9201 AGAGTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATG 9259 Query 15846 GTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTG 15905 || | ||| || |||||||| || |||||| ||| || || || |||| ||| Sbjct 9260 GTCACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTG 9319 Query 15906 GCAGACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTC 15963 || || | ||| ||| ||||| || |||| || || |||||||| | | | || | Sbjct 9320 GCGGATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGAC 9377 Query 15964 GCGTTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACC 16023 | ||||| || ||| | || || ||| | || || || | || || |||| Sbjct 9378 GTAATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACC 9437 Query 16024 TGCCTTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTC 16079 |||| || || | | || || | | || |||||||| ||||| ||||| | | || Sbjct 9438 TGCCGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TC 9493 Query 16080 ACAGTCACCAC 16090 || |||||||| Sbjct 9494 ACGGTCACCAC 9504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126506586084960