Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq10737 188 2e-43 seq2795 120 8e-23 >seq10737 Length=14001 Score = 188 bits (208), Expect = 2e-43 Identities = 668/1029 (65%), Gaps = 35/1029 (3%) Strand=Plus/Plus Query 15132 ACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTC 15191 ||||||||||||||||| |||||| | ||||| | ||||| | | | ||| | || Sbjct 8495 ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTT 8554 Query 15192 GACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTT 15251 || | | ||||| | || ||| || || | || || ||||| ||| || Sbjct 8555 GATGCCAAACAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATT 8611 Query 15252 ATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGT 15311 ||||| || || |||| || || || || ||||| ||| || ||| | || Sbjct 8612 ATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGG 8671 Query 15312 GCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCT 15371 || ||||| ||||| ||||| || || || |||||||| | || |||||| | | | Sbjct 8672 GCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAAT 8731 Query 15372 GACCGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGAAT------ATTGATAAATGGACG 15425 ||||||||| || |||| ||| ||| |||| |||| | | |||||| Sbjct 8732 GACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGAC 8791 Query 15426 CTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTGCCAGACGGCAAAGGGGGCAACGGT 15485 || || | |||| | | | ||||| ||| |||||| || ||||||||||| | || Sbjct 8792 CTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGA 8850 Query 15486 ACAGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTC 15545 | || ||| |||||||| || || |||||| | | ||||||| || ||| Sbjct 8851 GCCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTC 8905 Query 15546 CTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCA---GATT 15602 ||||| ||| ||| || ||||||| |||||||||| ||||| || | || | Sbjct 8906 CTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAAT 8965 Query 15603 GTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTGTT 15662 ||| ||||| || ||||| ||| || |||| | || || ||||| ||||| Sbjct 8966 GTG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGG 9022 Query 15663 GGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTT 15722 | |||| || |||||||| || || | ||||| || ||| |||| ||| |||| Sbjct 9023 GACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTG 9082 Query 15723 TCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTATTTGAGCAGGCG 15782 |||||||| ||| |||| |||| || ||| |||| |||| || || | | Sbjct 9083 AGCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAG 9142 Query 15783 CTGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAG 15842 | || ||||| | || ||| ||| || || || || ||||||||| ||||| Sbjct 9143 TTAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAG 9202 Query 15843 TCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAATAACAAGGATCGCGTTGT 15901 ||||| | || | ||| ||||| | | ||||| | | || || | || Sbjct 9203 AGTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATGGT 9261 Query 15902 TTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTGGC 15961 | ||| || |||||||| || |||||| ||| || || || |||| ||||| Sbjct 9262 CACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGC 9321 Query 15962 AGACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGC 16019 || | ||| ||| ||||| || |||| || || |||||||| | | | || || Sbjct 9322 GGATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGT 9379 Query 16020 GTTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACCTT 16079 ||||| || ||| | || || ||| | || || || | || || ||||| Sbjct 9380 AATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTG 9439 Query 16080 CCCTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTCAC 16135 || || || | | || || | | || |||||||| ||||| ||||| | | |||| Sbjct 9440 CCGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TCAC 9495 Query 16136 AGTCACCAC 16144 |||||||| Sbjct 9496 GGTCACCAC 9504 Score = 93.3 bits (102), Expect = 1e-14 Identities = 229/345 (66%), Gaps = 3/345 (1%) Strand=Plus/Plus Query 12821 ATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGTGGCGTGGTGGCGC 12880 ||||||| ||| | ||||| | | | ||||| || ||| || ||||| ||||| | Sbjct 6521 ATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTTGGTGATTC 6580 Query 12881 AAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAGAAC 12940 |||| || || | || ||||| | | || | || ||| || || || || | Sbjct 6581 AAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACCCACCGAGC 6640 Query 12941 ATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCA 13000 | ||| ||| ||| ||||| || || || || || ||| || | | |||| Sbjct 6641 AATTTTGCCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTATTGTTGCCA 6700 Query 13001 TCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAACTGGATAAAGCGCAATGCG 13060 |||| ||||||||||| |||||||| || ||||| ||| ||||||||| || ||||| | Sbjct 6701 TCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCGCACAATGTG 6760 Query 13061 ACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCC 13120 || | | | || ||| |||| ||||||||||| ||| | || ||||| Sbjct 6761 ACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTCGAACCATTA 6820 Query 13121 AGCCG--CG-CGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGC 13162 |||| || |||| |||||| ||| || ||||| |||| Sbjct 6821 TGCCGACCGAGGGAGTTAAACCACTGTTGGGCCGCCCGTTCGTGC 6865 >seq2795 Length=11366 Score = 120 bits (132), Expect = 8e-23 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 35406 AATGGCTAACCTACGCAAAGAAGCACGCGGCAGAGAATGTCAGGTACGTATTTACGGCGT 35465 |||||| || |||||||||||||| || || ||||||||||||| | || ||| | Sbjct 3919 AATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCAT 3860 Query 35466 ATGCAATGGCAATCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGG 35525 || || || || ||||| ||||||||| ||||||||||||||||| ||||| || Sbjct 3859 CTGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGG 3800 Query 35526 AACGGGAATGAAACCTGACGACCTGATCGGCGCATGGGCTTG-TAGTGACTGCCACGCGG 35584 | ||| |||||||| | || ||| | || |||||||| || | ||| || |||| | Sbjct 3799 CATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTTCGTG-TTGTCACGATG 3741 Query 35585 AGATCGACCG 35594 | || ||||| Sbjct 3740 AAATAGACCG 3731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132745530011760