Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq10737 215 1e-51 >seq10737 Length=14001 Score = 215 bits (238), Expect = 1e-51 Identities = 1148/1801 (64%), Gaps = 77/1801 (4%) Strand=Plus/Plus Query 14042 TATGGCCGTCGGCGGATAGGCGGAGCGATTATTTCTGCCGGAATTTATGTCGAAGATCAG 14101 || |||| || || || || || || || ||||| || || ||||| | |||||| ||| Sbjct 7748 TACGGCCAGCGCCGCATCGGGGGTGCCATCATTTCGGCGGGCATTTACGCCGAAGACCAG 7807 Query 14102 CAGTAGATAAATAACCTTTTTTCTGGCCA--CCTTCGGGTGGCtttttttATGGGCGCAA 14159 || || | || | |||||| | | | || || ||||||||||||||| | | Sbjct 7808 CAATA-ACGCATCATTGTTTTTCAGTCAGGTCGCTCAGGCGGCTTTTTTTATGGGTGAAC 7866 Query 14160 TATGGCTACAGATAAAGTGTTAAAGGGCCGCAAGGGCGGCAGCTCAAGTTCCCGAACCCC 14219 ||||| |||| | | | ||||| |||||||||||| |||| | || || || Sbjct 7867 TATGGG-ACAGC--ATCTTATTCAGGGCAGCAAGGGCGGCAATGAAAGTCCACGCACGCC 7923 Query 14220 TACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAAATCCTCGTTGCGCTTGG 14279 |||| ||| ||| |||||||| || | || |||||| | | ||||| || Sbjct 7924 GGTCGAATCGCCGGATTCCCTGCAATCGACCTCGTATGCCAAAATCGTATTGGCGCTGGG 7983 Query 14280 GGAAGGGGAGTTTGCAGGGCAGCTAACCGGCAAAGATATCTACCTGGACGGAACGGCGCT 14339 |||||| |||||||| || ||| | ||||| |||||| ||||| || |||| Sbjct 7984 GGAAGGTGAGTTTGCGGGCGGGCTGAACGGCACTAATATCTTTCTGGATAACACCCCGCT 8043 Query 14340 GGAGAATGCCGACGGTTCCCAAAACTTTAGCGGCGTGACGTGGGAGTTTCGCGCGGGAAC 14399 | | |||| ||| ||||||| || |||| |||||| || ||| | || || Sbjct 8044 GATTGGTCCCGAGGGTCAGGCAAACTTTGAGGGGGTGAAGTGGGAATTCCGCCCCGGTAC 8103 Query 14400 GCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAAATCAGCGTAGGAAC 14459 || ||| | ||||||| || || |||| ||||| ||| | | ||| || || Sbjct 8104 GCCCCATCAAGACTATATTCCCGGCATGCCCGCCGTGGAAAATGAACTGACCGTCGGGAC 8163 Query 14460 TGAGGTATCAAGCGCTACAG-CATGGACGCGCACCTTTACCAATACGCAGCTTTCAGCAG 14518 ||| || || | || ||||| | | | |||||||| || || || || | Sbjct 8164 TGA---ATTAAATG----AGTCATGGGTCAGATCGGTCACCAATACCCAACTGTCGGCGG 8216 Query 14519 TTCGCCTGCGTCTGAAATGGCCTTCGCTTTTC---AAACAGGAGGACGACGGCGATCTGG 14575 | ||||| || | ||||| || || |||||| | || ||||| || || Sbjct 8217 TGCGCCTTCGGTTATCCTGGCC---GCAATTGCAGAAACAGAAAGAAGACGGGGACACGG 8273 Query 14576 TGGGTTACTCGG-TCAATTATGCGATTGACCTGCAGACGGACGGCGGCACATGGCAGACG 14634 | || || ||| | ||||| |||||| || ||||| || || | | ||| | Sbjct 8274 TCGGCTA-TCGCATTGATTATCTGATTGAAGTGGCCACGGATGGGGGGGCGTATCAGGAG 8332 Query 14635 GTACTTAATACCAGC-GTGACCGGCAAAACGACGTCTGGTTATGAGCGCAGCCACCGTAT 14693 ||| | | || ||| ||||| || || | ||||| || ||||| | Sbjct 8333 TTACCCACG-CTGGCTGTGGATGGCAAGACTACCACCAAATATGAACGGTCACACCGCGT 8391 Query 14694 CGATTTACCGCA----------GGCTGGCAGCACCTGGACAATACGTCTGCGTAAGATTA 14743 ||||||||| | ||||||||| | || | || | || | || Sbjct 8392 CGATTTACCCAAAGCCCATTCTGGCTGGCAGGTGCGGG----TTCGCC-GCCT--GACCC 8444 Query 14744 CCTCTGATGCCAACAGCGCGAAGATCGGTGACACGATGA-CGCTGCAGAGCTTCACCGAG 14802 || | ||| | | || ||| | || ||||| || || || || |||||| Sbjct 8445 CCAAACAGACCAGTAAC-CG--GATTGCCGATGCGATGGTCGTTGAAGCCATT-ACCGAG 8500 Query 14803 GTGATTGACGCCAAACTACGTTACCCCAACACCGCGCTGCTCTACATCGAATTCGACTCA 14862 ||||||||||| ||||| |||||||| | ||||| | | | | | | || || | Sbjct 8501 GTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTTGATGCC 8560 Query 14863 AGCCAGTTCAACGGCTCTATTCCCCAAATTTCATGCGAACCGCGCGGCCGCGTTATCCGC 14922 | |||||| || ||| || || | || || ||||| ||| ||||||| Sbjct 8561 AAACAGTTCC---GCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATTATCCGG 8617 Query 14923 GTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTGCGTTT 14982 || || |||| || || || || ||||| ||| || ||| | || || ||| Sbjct 8618 GTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGGGCCTTT 8677 Query 14983 AAGTGGGCATGGACGGATAATCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTGACCGG 15042 || ||||| ||||| || ||||| |||||||| | || |||||| | | ||||||| Sbjct 8678 AAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAATGACCGG 8737 Query 15043 TTCGGCCTCGGTCACCGTTTGACTGCTGCGAATAT--CGAT----AAATGGACGCTTTAT 15096 ||| || | ||| ||| ||| |||| |||| | || | |||||| || || Sbjct 8738 TTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGACCTGTAC 8797 Query 15097 CAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAA 15156 | |||| | | | ||||| ||| ||| || || ||||||||||| | || |||| Sbjct 8798 CGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGAGCCGAG 8856 Query 15157 CCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGT 15216 ||| |||||||| || || |||||| | | ||||||| || |||||||| Sbjct 8857 ACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTCCTGCGG 8911 Query 15217 GATTTTGCCGCTATCTTCCGAGGCATGACCTACTGGGGCGGGGATCA---GATTGTGGCC 15273 ||| ||| || ||||||| |||||||||| ||||| || | || |||| Sbjct 8912 GATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAATGTG--- 8968 Query 15274 CTGGCTGACATGCCGCGCGATGTTGATTACAGCTACACGCGCGCTAACGTTGTTGGCGGT 15333 ||||| || ||||| ||| || |||| | || ||| ||||| ||||| | |||| Sbjct 8969 CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGGGACGGT 9028 Query 15334 CGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTTTCATGG 15393 || |||||||| || || | ||||| || ||| |||| ||| |||| ||| Sbjct 9029 AAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTGAGCTGG 9088 Query 15394 TCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTTTTTGAGCAGGCGCTGGTG 15453 ||||| ||| |||| |||| || ||| |||| |||| || || | | | || Sbjct 9089 TCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAGTTAATG 9148 Query 15454 GCGCGATACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGTCAGAA 15513 || || | || ||| ||| || || || || ||||||||| ||||| || Sbjct 9149 CGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAGAGTGAG 9208 Query 15514 GCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAACAACAAGGATCGCGTTGTTTCGTT 15572 || | || | ||| ||||| | | |||||| | | || || | || | || Sbjct 9209 GCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATGGTCACCTT 9267 Query 15573 TGATGTCGGGCTGGACGGCAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCAGACGA 15632 | || |||||||| ||| |||||| ||| || || || |||| ||||| || || Sbjct 9268 TACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGCGGATGA 9327 Query 15633 GCTGCTATCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCGTTATCAA 15692 | ||||| || |||| || || |||||||| | | | || || ||||| Sbjct 9328 AGCCTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGTAATATCAC 9387 Query 15693 ACTTGACCGCGTGGCAGATGCAGCAGCGGGTGATCGCCTTATTCTCAACTTACCATCCGG 15752 || ||| | ||| | ||| || ||| || || | || || ||| | || || || Sbjct 9388 GCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTGCCGTCGGG 9447 Query 15753 -AGTGTCGCAGAGCAGGACCATTCAGGCCGTAAACGGGGAA---TCAGTCACGGTCACCA 15808 | | || || | | || |||||||| || || ||||| | | |||||||||||| Sbjct 9448 CAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TCACGGTCACCA 9503 Query 15809 C 15809 | Sbjct 9504 C 9504 Score = 91.5 bits (100), Expect = 4e-14 Identities = 242/367 (66%), Gaps = 11/367 (3%) Strand=Plus/Plus Query 12270 TTTGGTGGGTTCCCTGGCACGTCTTTGATCAGGAGCTGATATG------CGGCAGAAAAC 12323 |||||||| ||||| ||| | | ||| | ||| | ||| ||| | || ||| | Sbjct 6453 TTTGGTGGCTTCCCCGGCTCTGCATTGTTAAGGCGGTGAGATGGATATACTGCGAAAATC 6512 Query 12324 CATTG---ATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCGGCGT 12380 || | |||| || ||| | ||||| | | | ||||| || || ||||| || | Sbjct 6513 GATGGTGAATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTT 6572 Query 12381 GGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTGCCACGGAACC 12440 |||| || || || || | ||| ||| ||||||||| ||| | ||| Sbjct 6573 GGTGATTCAAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACC 6632 Query 12441 GGAGGA-CAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGCACGG 12499 || |||||||| |||| || ||||||||||| || || || ||| || Sbjct 6633 CACCGAGCAATTTTG-CCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTA 6691 Query 12500 TGATCGCCATCGCTCACAGTCACCCTGATGCCACGACACAGCCGAGCGAACTGGATAAAG 12559 | | ||||||| ||||||||||| || |||||||||||||| ||| ||||||||| | Sbjct 6692 TTGTTGCCATCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCG 6751 Query 12560 CGCAATGCGATGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGTGATTTAC 12619 | ||||| || | | | || ||| |||| ||||||||||||||| | | Sbjct 6752 CACAATGTGACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTC 6811 Query 12620 GCACCAT 12626 | ||||| Sbjct 6812 GAACCAT 6818 Score = 89.7 bits (98), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 16297 CTGACGGGTAAAGTGGGCAATCCACCGAAGCCGGTTGGCTTCATCGCTTCTGAAAACGTG 16356 |||| ||| |||| |||||| || ||| ||| | ||||||| || | | | Sbjct 10299 CTGAAGGGAAAAGAGGGCAACCCTCCGGCACCGTTGGGCTTCAAGGCCACGCCGA---TT 10355 Query 16357 GTTTTCGGTATCGAGCTGAATTGGGGATTCTCGGCGAATACCGACGACACGCTGAAGACG 16416 | ||||||||| |||| | ||||| || | | | ||||| ||||||||||| || Sbjct 10356 ATCTTCGGTATCCAGCTTGACTGGGGTTTTGCACCTCAGACCGATGACACGCTGAAAACT 10415 Query 16417 GAGATTCAGTACAGCCTGAC-CGGGACAGGGGACGATGCGATGCTGCTGGCCGATGTGCC 16475 |||||||||||||||| ||| ||| ||||| | |||| || |||||||| | || Sbjct 10416 GAGATTCAGTACAGCCCGACGAATGAC-GGGGAAGGGCTGATGTTGTTGGCCGATATTCC 10474 Query 16476 ATATCCACAACGAA 16489 ||||| ||||||| Sbjct 10475 CTATCCCCAACGAA 10488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127949541834184