Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq10737 187 6e-43 >seq10737 Length=14001 Score = 187 bits (206), Expect = 6e-43 Identities = 670/1031 (65%), Gaps = 39/1031 (4%) Strand=Plus/Plus Query 15069 ACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTC 15128 ||||||||||||||||| |||||| | ||||| | ||||| | | | ||| | || Sbjct 8495 ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTT 8554 Query 15129 GACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTT 15188 || | | ||||| | || ||| || || | || || ||||| ||| || Sbjct 8555 GATGCCAAACAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATT 8611 Query 15189 ATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGT 15248 ||||| || || |||| || || || || ||||| ||| || ||| | || Sbjct 8612 ATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGG 8671 Query 15249 GCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCT 15308 || ||||| ||||| ||||| || || || |||||||| | || |||||| | | | Sbjct 8672 GCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAAT 8731 Query 15309 GACCGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGAAT------ATTGATAAATGGACG 15362 ||||||||| || |||| ||| ||| |||| |||| | | |||||| Sbjct 8732 GACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGAC 8791 Query 15363 CTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTGCCAGACGGCAAAGGGGGCAACGGT 15422 || || | |||| | | | ||||| ||| |||||| || ||||||||||| | || Sbjct 8792 CTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGA 8850 Query 15423 ACAGAACCACGTTATACCTGCAACGTGTACATCCAGGATCGGA--ACGACGCCTACACAG 15480 | || ||| |||||||| || || || ||| ||| | | ||||||| || | Sbjct 8851 GCCGAGACAC-----ACCTGCAATGTCTATATTCAG--TCGCAAGAGGACGCCTGGACTG 8903 Query 15481 TCCTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCA---GA 15537 ||||||| ||| ||| || ||||||| |||||||||| ||||| || | || Sbjct 8904 TCCTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGA 8963 Query 15538 TTGTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTG 15597 |||| ||||| || ||||| ||| || |||| | || || ||||| ||||| Sbjct 8964 ATGTG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGC 9020 Query 15598 TTGGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGG 15657 | |||| || |||||||| || || | ||||| || ||| |||| ||| ||| Sbjct 9021 GGGACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGG 9080 Query 15658 TTTCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTATTTGAGCAGG 15717 | |||||||| ||| |||| |||| || ||| |||| |||| || || | Sbjct 9081 TGAGCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTC 9140 Query 15718 CGCTGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGC 15777 | | || ||||| | || ||| ||| || || || || ||||||||| ||| Sbjct 9141 AGTTAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGC 9200 Query 15778 AGTCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAATAACAAGGATCGCGTT 15836 || ||||| | || | ||| ||||| | | ||||| | | || || | Sbjct 9201 AGAGTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATG 9259 Query 15837 GTTTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTG 15896 || | ||| || |||||||| || |||||| ||| || || || |||| ||| Sbjct 9260 GTCACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTG 9319 Query 15897 GCAGACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTC 15954 || || | ||| ||| ||||| || |||| || || |||||||| | | | || | Sbjct 9320 GCGGATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGAC 9377 Query 15955 GCGTTATCAAACTTGACCGCGTAGCTGATGCAACACCAGGTGATCGCCTTATTCTCAACC 16014 | ||||| || ||| | || || ||| | || || || | || || |||| Sbjct 9378 GTAATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACC 9437 Query 16015 TTCCCTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTC 16070 | || || || | | || || | | || |||||||| ||||| ||||| | | || Sbjct 9438 TGCCGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TC 9493 Query 16071 ACAGTCACCAC 16081 || |||||||| Sbjct 9494 ACGGTCACCAC 9504 Score = 93.3 bits (102), Expect = 1e-14 Identities = 273/414 (66%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 12700 TTTGGTGGCTTCCCGGGCACGTCTTTGATCAGGAGTTGATATGCGTCA-----GAAAACC 12754 |||||||||||||| ||| | | ||| | ||| | ||| ||| | ||||| | Sbjct 6453 TTTGGTGGCTTCCCCGGCTCTGCATTGTTAAGGCGGTGAGATGGATATACTGCGAAAATC 6512 Query 12755 -ATAG---ATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGGCGT 12810 || | ||||||| ||| | ||||| | | | ||||| || ||| || || || | Sbjct 6513 GATGGTGAATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTT 6572 Query 12811 GGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCC 12870 |||| || || || ||| | ||| ||| ||||| ||| ||| | | || Sbjct 6573 GGTGATTCAAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACC 6632 Query 12871 GGAGGA-CAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAACGG 12929 || |||||||| ||| |||||||| ||||| || || || ||| || Sbjct 6633 CACCGAGCAATTTTG-CCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTA 6691 Query 12930 TGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAACTGGATAAAG 12989 | | |||||||| ||||||||||| |||||||| || ||||| ||| ||||||||| | Sbjct 6692 TTGTTGCCATCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCG 6751 Query 12990 CGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTAC 13049 | ||||| ||| | | | || ||| |||| ||||||||||| ||| | | Sbjct 6752 CACAATGTGACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTC 6811 Query 13050 GCACCATCCAGCCG--CG-CGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGC 13100 | ||||| |||| || |||| |||||| ||| || ||||| |||| Sbjct 6812 GAACCATTATGCCGACCGAGGGAGTTAAACCACTGTTGGGCCGCCCGTTCGTGC 6865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128352673595608