Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq10737 188 2e-43 >seq10737 Length=14001 Score = 188 bits (208), Expect = 2e-43 Identities = 1187/1868 (64%), Gaps = 92/1868 (5%) Strand=Plus/Plus Query 14264 TCGTATGCGTTTGGCGG---GGTAACCAACACTGCAGCGCAAGGCTACCCGGTGCCTCTG 14320 || ||||| ||||| || ||| | | || |||| || || |||| || || || Sbjct 7688 TCATATGCCTTTGGTGGCCCGGTTAACTCCATTGCA---CAGGGAAACCCCGTTCCGTTG 7744 Query 14321 CTTTATGGTAAGCGTCGAATCGGCGGAGCGATTATTTCTGCCGGAATTTATGTCGAAGAT 14380 || || |||| || ||||| || || || ||||| || || ||||| | |||||| Sbjct 7745 GGGTACGGCCAGCGCCGCATCGGGGGTGCCATCATTTCGGCGGGCATTTACGCCGAAGAC 7804 Query 14381 CAGCAGTAGATAACTAACC----TTTTT---TCTGGCCACCTTCGGGTGGCTTTTTT-AT 14432 ||||| ||||| | | ||||| || || | | || || ||||||||| || Sbjct 7805 CAGCA----ATAACGCATCATTGTTTTTCAGTCAGGTCGC--TCAGGCGGCTTTTTTTAT 7858 Query 14433 GGGCGCAATATGGCTACAGATAAAGTGTTAAAAGGCCGCAAGGGCGGCAGCTCAAGTTCC 14492 ||| | | ||||| |||| | | | | ||| |||||||||||| |||| | Sbjct 7859 GGGTGAACTATGGG-ACAGC--ATCTTATTCAGGGCAGCAAGGGCGGCAATGAAAGTCCA 7915 Query 14493 CGAACTCCTACCGAACAGCCTGATGATCTGCAATCTGTAGCGAAGGCAAAAATCCTCGTT 14552 || || || |||| ||| ||| |||||||| || | || |||||| | | Sbjct 7916 CGCACGCCGGTCGAATCGCCGGATTCCCTGCAATCGACCTCGTATGCCAAAATCGTATTG 7975 Query 14553 GCGCTTGGGGAAGGTGAGTTTGCAGGGCAGCTCACCGGCAAAGATATCTACCTGGACGGA 14612 ||||| ||||||||||||||||| || ||| | ||||| |||||| ||||| Sbjct 7976 GCGCTGGGGGAAGGTGAGTTTGCGGGCGGGCTGAACGGCACTAATATCTTTCTGGATAAC 8035 Query 14613 ACAGCGCTGGAGAATGCTGACGG-CTCCCAAAACTTCAGCGGGGTAACGTGGGAGTTTCG 14671 || ||||| | | || || | |||| || || ||||| | |||||| || || Sbjct 8036 ACCCCGCTGATTGGTCCCGAGGGTCAGGCAAACTTTGAG-GGGGTGAAGTGGGAATTCCG 8094 Query 14672 CGCGGGAACTCAGGCGCAAAAATATATTCAGGGTATTCCCGGTACCGAAAACGAGATCAG 14731 | | || || | ||| | ||||||| || || |||| ||||| || | | Sbjct 8095 CCCCGGTACGCCCCATCAAGACTATATTCCCGGCATGCCCGCCGTGGAAAATGAACTGAC 8154 Query 14732 CGTAGGAACTGAGGTATCAAGTGCCACAGCCTGGACGCGCACGTTTACCAATACGCAGCT 14791 ||| || ||||| || || || || ||| | || | |||||||| || || Sbjct 8155 CGTCGGGACTGA---ATTAAATGAGTCA---TGGGTCAGATCGGTCACCAATACCCAACT 8208 Query 14792 TTCAGCAGTTCGCCTGCGTCTTAAATGGCCCTCGCTTTTC---AAACAGGAGGACGACGG 14848 || || || ||||| || | ||||| || || |||||| | || ||||| Sbjct 8209 GTCGGCGGTGCGCCTTCGGTTATCCTGGCC---GCAATTGCAGAAACAGAAAGAAGACGG 8265 Query 14849 CGATCTGGTGGGTTACTCGG-TCAATTATGCAATTGACCTGCAGACGGACGGCGGCGCAT 14907 || ||| || || ||| | ||||| ||||| || ||||| || || || | Sbjct 8266 GGACACGGTCGGCTA-TCGCATTGATTATCTGATTGAAGTGGCCACGGATGGGGGGGCGT 8324 Query 14908 GGCAGACGGTACTCAATACCAGC-GTGACCGGAAAAACGACGTCTGGTTATGAGCGCAGC 14966 ||| | ||| || | || ||| || || || || | ||||| || Sbjct 8325 ATCAGGAGTTACCCACG-CTGGCTGTGGATGGCAAGACTACCACCAAATATGAACGGTCA 8383 Query 14967 CACCGTATCGATTTACCGCAGGCTGGCAGCACCTGGACAATACGTCTGCGTAAGATTACC 15026 ||||| |||||||||| | || || |||| | || | || | | Sbjct 8384 CACCGCGTCGATTTACCCAAAGCC--CATT--CTGGCTGGCAGGTGCGGGTTCGC---CG 8436 Query 15027 TCTGACGCC--AACAGCGCG--AA---GATCGGCGACACGATGAT-GCTGCAGAGCTTCA 15078 ||||| || ||||| | || ||| | ||| ||||| | | || || || | Sbjct 8437 CCTGACCCCCAAACAGACCAGTAACCGGATTGCCGATGCGATGGTCGTTGAAGCCATT-A 8495 Query 15079 CCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTCG 15138 |||||||||||||||| |||||| | ||||| | ||||| | | | ||| | || | Sbjct 8496 CCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTTG 8555 Query 15139 ACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTTA 15198 | | | ||||| | || ||| || || | || || ||||| ||| ||| Sbjct 8556 ATGCCAAACAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATTA 8612 Query 15199 TCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGTG 15258 |||| || || |||| || || || || ||||| ||| || ||| | || | Sbjct 8613 TCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGGG 8672 Query 15259 CGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCTG 15318 | ||||| ||||| ||||| || || || |||||||| | || |||||| | | || Sbjct 8673 CCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAATG 8732 Query 15319 ACCGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGAAT------ATTGATAAATGGACGC 15372 |||||||| || |||| ||| ||| |||| |||| | | |||||| | Sbjct 8733 ACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGACC 8792 Query 15373 TTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGTA 15432 | || | |||| | | | ||||| ||| ||| || || ||||||||||| | || Sbjct 8793 TGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGAG 8851 Query 15433 CAGAACCACGTTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTCC 15492 | || ||| |||||||| || || |||||| | | ||||||| || |||| Sbjct 8852 CCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTCC 8906 Query 15493 TGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCA---GATTG 15549 |||| ||| ||| || ||||||| |||||||||| ||||| || | || || Sbjct 8907 TGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAATG 8966 Query 15550 TGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTGTTG 15609 || ||||| || ||||| ||| || |||| | || || ||||| ||||| | Sbjct 8967 TG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGGG 9023 Query 15610 GCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTTT 15669 |||| || |||||||| || || | ||||| || ||| |||| ||| |||| Sbjct 9024 ACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTGA 9083 Query 15670 CATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTATTTGAGCAGGCGC 15729 |||||||| ||| |||| |||| || ||| |||| |||| || || | | Sbjct 9084 GCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAGT 9143 Query 15730 TGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAGT 15789 | || ||||| | || ||| ||| || || || || ||||||||| ||||| Sbjct 9144 TAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAGA 9203 Query 15790 CAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAATAACAAGGATCGCGTTGTT 15848 ||||| | || | ||| ||||| | | ||||| | | || || | || Sbjct 9204 GTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATGGTC 9262 Query 15849 TCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCGGGCTACATCATCGCCGTGGCA 15908 | ||| || |||||||| || |||||| ||| || || || |||| ||||| Sbjct 9263 ACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGCG 9322 Query 15909 GACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGCG 15966 || | ||| ||| ||||| || |||| || || |||||||| | | | || || Sbjct 9323 GATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGTA 9380 Query 15967 TTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACCTAC 16026 ||||| || ||| | || || ||| | || || || | || || ||||| | Sbjct 9381 ATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTGC 9440 Query 16027 CTTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTCACA 16082 | || || | | || || | | || |||||||| ||||| ||||| | | |||| Sbjct 9441 CGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TCACG 9496 Query 16083 GTCACCAC 16090 |||||||| Sbjct 9497 GTCACCAC 9504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132553562506320