Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq10737 183 8e-42 seq2795 150 4e-32 >seq10737 Length=14001 Score = 183 bits (202), Expect = 8e-42 Identities = 667/1029 (65%), Gaps = 35/1029 (3%) Strand=Plus/Plus Query 14635 ACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCGAATTC 14694 ||||||||||||||||| |||||| | ||||| | ||||| | | | ||| | || Sbjct 8495 ACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTTCAGTTT 8554 Query 14695 GACTCAAGCCAGTTCAACGGCTCTATTCCTCAAATTTCATGCGAACCGCGCGGCCGCGTT 14754 || | | ||||| | || ||| || || | || || ||||| ||| || Sbjct 8555 GATGCCAAACAGTT---CCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGCATT 8611 Query 14755 ATCCGCGTTCCAGATACCTACGACCCTGAAACCCGCACTTATAGCGGTACATGGACCGGT 14814 ||||| || || |||| || || || || ||||| ||| || ||| | || Sbjct 8612 ATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCAGGG 8671 Query 14815 GCGTTTAAGTGGGCATGGACGGATAACCCTGCGTGGATTTTTTACGACCTGGTTGTTTCT 14874 || ||||| ||||| ||||| || || || |||||||| | || |||||| | | | Sbjct 8672 GCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGATCAAT 8731 Query 14875 GACCGGTTCGGCCTTGGGCACCGTTTGACCGCTGCGAAT------ATTGATAAATGGACG 14928 ||||||||| || |||| ||| ||| |||| |||| | | |||||| Sbjct 8732 GACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATGGGAC 8791 Query 14929 CTTTATCAGGTTGCTCAGTATTGTGATCAGATGGTACCAGACGGCAAAGGGGGCAACGGT 14988 || || | |||| | | | ||||| ||| ||| || || ||||||||||| | || Sbjct 8792 CTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGG-GATGGA 8850 Query 14989 ACAGAACCACGCTATACCTGCAACGTGTACATTCAGGACCGGAACGACGCCTACACAGTC 15048 | || ||| |||||||| || || |||||| | | ||||||| || ||| Sbjct 8851 GCCGAGACAC-----ACCTGCAATGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTC 8905 Query 15049 CTGCGTGATTTTGCCGCTATCTTCCGTGGCATGACCTACTGGGGCGGGGATCA---GATT 15105 ||||| ||| ||| || ||||||| |||||||||| ||||| || | || | Sbjct 8906 CTGCGGGATATTGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAAT 8965 Query 15106 GTGGCCCTGGCTGACATGCCGCGCGATGTTGATTACAGCTATACGCGCGCTAACGTTGTT 15165 ||| ||||| || ||||| ||| || |||| | || || ||||| ||||| Sbjct 8966 GTG---CTGGCGGATATGCCCCGCACGGTGGATTTAAACTTCACCCGCGCCAACGTGCGG 9022 Query 15166 GGCGGTCGCTTCACCTATTCGAGCAGCACCACGAAAAGCCGCTACACCACAGCGCTGGTT 15225 | |||| || |||||||| || || | ||||| || ||| |||| ||| |||| Sbjct 9023 GACGGTAAATTTACCTATTCCAGTGCCAGCGAGAAAACCCATTACTCCACGGCGATGGTG 9082 Query 15226 TCATGGTCAGACCCGGGTAACGCTTATGCCGACGCGATGGAGCCGGTATTTGAGCAGGCG 15285 |||||||| ||| |||| |||| || ||| |||| |||| || || | | Sbjct 9083 AGCTGGTCAGATCCGCAGAACGGTTATCAGGATGCGGTGGAAGCGGTCTTCGACCCTCAG 9142 Query 15286 CTGGTGGCGCGGTACGGCTTCAATCAGCTGGAAATGACAGCCATCGGCTGCACCAGGCAG 15345 | || ||||| | || ||| ||| || || || || ||||||||| ||||| Sbjct 9143 TTAATGCGCCGGTATCAGGTGAAACAGGCGGACATCACCGCAATTGGCTGCACCCGGCAG 9202 Query 15346 TCAGAGGCGAACCGAAAGGGGCGCTGGGGTATTCT-CACCAATAACAAGGATCGCGTTGT 15404 ||||| | || | ||| ||||| | | ||||| | | || || | || Sbjct 9203 AGTGAGGCCCAGCG-GCGCGGCAAGTGGGTACTGTATACCAACCAGTATGACCGGATGGT 9261 Query 15405 TTCGTTTGATGTCGGGCTGGACGGAAACATTCCGCAGCCTGGCTACATCATCGCCGTGGC 15464 | ||| || |||||||| || |||||| ||| || || || |||| ||||| Sbjct 9262 CACCTTTACCGTGGGGCTGGAGGGCCGAATTCCGTTGCCCGGTTATATTATCGGGGTGGC 9321 Query 15465 AGACG-AGCTGCTT-TCCGGAAAGGTTATGGGCGGCCGCATCAGCGCCGTTAACGGTCGC 15522 || | ||| ||| ||||| || |||| || || |||||||| | | | || || Sbjct 9322 GGATGAAGC--CTTCTCCGGTCGCGTACTGGGTGGGCGTATCAGCGCGGCTGATGGACGT 9379 Query 15523 GTTATCAAACTTGACCGCGTAGCTGATGCAGCACCAGGTGATCGCCTTATTCTCAACCTT 15582 ||||| || ||| | || || ||| | || || || | || || ||||| Sbjct 9380 AATATCACGCTGGACAGAGTGTCTTCGGCACAAGTGGGCGAGCGGTTAATCCTGAACCTG 9439 Query 15583 CCCTCCGG-AGCGTCGCAGAGCAGGACCATTCAGGCCGTGAACGGGGAA---TCAGTCAC 15638 || || || | | || || | | || |||||||| ||||| ||||| | | |||| Sbjct 9440 CCGTCGGGCAAAGCCG-AGGGGCGCACTATTCAGGCGGTGAA--GGGAACGGTGA-TCAC 9495 Query 15639 AGTCACCAC 15647 |||||||| Sbjct 9496 GGTCACCAC 9504 Score = 96.9 bits (106), Expect = 9e-16 Identities = 274/414 (66%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 12265 TTTGGTGGCTTCCCGGGCACGTCTTTGATCAGGAGTTGATATGCGTCA-----GAAAACC 12319 |||||||||||||| ||| | | ||| | ||| | ||| ||| | ||||| | Sbjct 6453 TTTGGTGGCTTCCCCGGCTCTGCATTGTTAAGGCGGTGAGATGGATATACTGCGAAAATC 6512 Query 12320 -ATCG---ATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCATGAGTGTTGCGGCGT 12375 || | ||||||| ||| | ||||| | | | ||||| || |||| || || || | Sbjct 6513 GATGGTGAATGCGATCATGACTCATGCCGAAACCGAATACCCCAATGAATGCTGTGGTTT 6572 Query 12376 GGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGCGCC 12435 |||| || || || ||| | ||| ||| ||||| ||| ||| | | || Sbjct 6573 GGTGATTCAAAACAGTCGCAGACAGGAATATATCCGCTGCCGCAATGCCGCCCCCTCACC 6632 Query 12436 GGAGGA-CAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAACGG 12494 || |||||||| ||| |||||||| ||||| || || || ||| || Sbjct 6633 CACCGAGCAATTTTG-CCTCCATCCCGAAGATTACGCTAAAGCCGAAGATGCGGGGACTA 6691 Query 12495 TGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAACTGGATAAAG 12554 | | |||||||| ||||||||||| |||||||| || ||||| ||| ||||||||| | Sbjct 6692 TTGTTGCCATCGTCCACAGTCACCCGGACGCCACGACACAGCCCAGCCAACTGGATATCG 6751 Query 12555 CGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTAC 12614 | ||||| ||| | | | || ||| |||| ||||||||||| ||| | | Sbjct 6752 CACAATGTGACCTGTCACAAATCCCGTGGGTCATTGCTTCATGGCCGGAGGGTGATATTC 6811 Query 12615 GCACCATCCAGCCG--CG-CGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGC 12665 | ||||| |||| || |||| |||||| ||| || ||||| |||| Sbjct 6812 GAACCATTATGCCGACCGAGGGAGTTAAACCACTGTTGGGCCGCCCGTTCGTGC 6865 >seq2795 Length=11366 Score = 150 bits (166), Expect = 4e-32 Identities = 149/190 (78%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 32661 AATGGCTAACCTACGCAAAGAAGCGCGCGGCAGAGAATGCCAGGTACGTATTTACGGCAT 32720 |||||| || ||||||||||||||||| || ||||||| ||||| | || ||||| Sbjct 3919 AATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCAT 3860 Query 32721 ATGCAATGGCAACCCTGAAACTACAGTTCTGGCACATTACCGGATGGCTGGAATTTGCGG 32780 || || || ||| ||||| ||||||||| ||||||||||||||||| ||||| || Sbjct 3859 CTGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGG 3800 Query 32781 AACGGGAATGAAACCTGACGACCTGATTGGCGCATGGGCTTGTAGCGCGT-GTCACGATG 32839 | ||| |||||||| | || ||| |||| |||||||| ||| || || ||||||||| Sbjct 3799 CATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTT-CGTGTTGTCACGATG 3741 Query 32840 AAATCGACCG 32849 |||| ||||| Sbjct 3740 AAATAGACCG 3731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124542118612624