Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq2795 87.8 5e-13 >seq2795 Length=11366 Score = 87.8 bits (96), Expect = 5e-13 Identities = 191/283 (67%), Gaps = 5/283 (2%) Strand=Plus/Minus Query 23327 TGCCCTGGCCGCCGTCAGTAAACAAGTACTGGCGACACTCAAGAGGCATCCACTACAT-- 23384 |||| ||||| ||| |||| || | || ||| |||||||||| | | ||||||| Sbjct 3610 TGCCGTGGCCTCCGACAGTTAATCACTATTGGAAACACTCAAGATGGGGC-ACTACATAT 3552 Query 23385 CAGCGATTGGGGTAAGCGATACCGACGAGAAGTAATCGAAATCATTCAGCAGCACAAGTT 23444 ||| || || | | | ||||||| || | | | | |||||||||||||| || | Sbjct 3551 CAGAGAAAGGCATTAAC--TACCGACAGCAAATCAGCAACATCATTCAGCAGCAAAACCT 3494 Query 23445 AGACATAAAAATCCAACCCCGCATCAGAATCATCATCCACGCAGCACCCCCCGATAACCG 23504 || || | |||| ||||||||| ||||| || || ||||| || | || Sbjct 3493 CAGTATCAATACCCAATCCCGCATCAAAATCAAAATAGTTGCCAATCCCCCAGACAGACG 3434 Query 23505 CAAACGCGATTTGGACAATCTACCCAAAGCCGTTTTTGACGCACTCACCAGTGCGGGCTT 23564 | | || | || || || || ||||| ||||| ||| | || || ||| || || Sbjct 3433 ACAGAGAGACCTCGATAACCTGCCTAAAGCGGTTTTCGACTCGCTGACTCATGCTGGATT 3374 Query 23565 CTGGCTGGATGACGGTCAGGTAGACGATATGCGCATCAAGCGC 23607 |||| |||||| |||||| || ||||| ||||||| ||| Sbjct 3373 CTGGGCTGATGACAATCAGGTTGATTATATGAGCATCAAACGC 3331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152207835604952