Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_019934.1 Length=39012 Score E Sequences producing significant alignments: (Bits) Value seq10737 365 1e-96 >seq10737 Length=14001 Score = 365 bits (404), Expect = 1e-96 Identities = 1231/1896 (65%), Gaps = 52/1896 (3%) Strand=Plus/Minus Query 3261 ACCGCCTGAAGGGTACGGGCCTGTGATTTGCCGGACGGCAGGTTGACGATAAGCCTGTCG 3320 |||||||||| || || ||| | |||||| ||||||||||| | ||| | || ||| Sbjct 9477 ACCGCCTGAATAGTGCGCCCCTCGGCTTTGCCCGACGGCAGGTTCAGGATTAACCGCTCG 9418 Query 3321 CCCGCTTTTGCATCCGGCGCCCGGTCGAGCGTCAGCGCGCGACCGTTCACCTGACTGATA 3380 ||| ||| ||| | | | | ||| ||||| | || || | || |||||| Sbjct 9417 CCCACTTGTGCCGAAGACACTCTGTCCAGCGTGATATTACGTCCATCAGCCGCGCTGATA 9358 Query 3381 CGCCCGCCCATCACCCGCCCCGACAGATACTGATCCGCCACGCCGATGATATGGCCCGGC 3440 ||||| |||| || || || || | | ||||||||| ||||| |||| || ||| Sbjct 9357 CGCCCACCCAGTACGCGACCGGAGAAGGCTTCATCCGCCACCCCGATAATATAACCGGGC 9298 Query 3441 AGCGGGATCATGCCTTCCAGCCCAGTGGTGAAACTCACCATCCGGTCTTTAGCATTTGTC 3500 | ||| || ||| |||||||| ||| || | ||||||||||| | || || Sbjct 9297 AACGGAATTCGGCCCTCCAGCCCCACGGTAAAGGTGACCATCCGGTCATACTGGTTGGTA 9238 Query 3501 AGCAGCGCCCAGCGGCCGCGGCGGTTGGCCTCGGTACGCCGCGTGCAGCCGATGGCGGAT 3560 ||| |||| |||||| || | |||||| | |||| |||||||| || |||| Sbjct 9237 TACAGTACCCACTTGCCGCGCCGCTGGGCCTCACTCTGCCGGGTGCAGCCAATTGCGGTG 9178 Query 3561 ATCTGCGTCTGGCGCACGCCGTAGCGCCGCACCAGATCAGGCTCCATCACCGCTTCCACT 3620 || | || ||| ||| || || |||| | | ||| || | ||||||||||| Sbjct 9177 ATGTCCGCCTGTTTCACCTGATACCGGCGCATTAACTGAGGGTCGAAGACCGCTTCCACC 9118 Query 3621 TCATCGGTGTAATGGTTCTCCGGGTTTGACCAGCTCACCATCGCCGTTGAATAACGGTTC 3680 |||| ||| ||||| ||| | ||||||||||||||||||||| || ||| || | Sbjct 9117 GCATCCTGATAACCGTTCTGCGGATCTGACCAGCTCACCATCGCCGTGGAGTAATGGGTT 9058 Query 3681 TTCTCGCTGCCGCTGGCGTAGGAGAATTTGCCGTCAATAACGTTGGCGCGGGTGTAG--- 3737 ||||||||| | |||| |||| ||||| ||||| ||||||||||||||| || Sbjct 9057 TTCTCGCTGGCACTGGAATAGGTAAATTTACCGTCCCGCACGTTGGCGCGGGTGAAGTTT 8998 Query 3738 ACATACGTCATATCGCGCGGCATATCCGCCAGCGCGGCCAGCTGATTACCGGCCCAGTAT 3797 | || | | | ||| ||||||||||||||| | || | ||| |||||| | Sbjct 8997 AAATCCACCGT---GCGGGGCATATCCGCCAGCACATTCATGTTATTGTTCGCCCAGAAG 8941 Query 3798 GTCATGCCGCGGAAGATGCTCGCCAGGTCGCGCAGCACCGTAAACGCCTCGTTCTGGCTC 3857 ||||||||| |||||| | | | || ||||| || || | || || | || | Sbjct 8940 GTCATGCCGTTGAAGATACCGACAATATCCCGCAGGACAGTCCAGGCGTCCTCTTGCGAC 8881 Query 3858 TGGATATACACGTCGCAGAGAAAACGTGGCTCAGTACCGCTGCCGCCGGTACCGTCCGGC 3917 || ||||| || | |||| ||| ||| | || | || || | || |||||| Sbjct 8880 TGAATATAGACATTGCAG-----GTGTGTCTCGGCTCC-ATCCCCCCTTTGCCATCCGGC 8827 Query 3918 ACGGGCTGATCGCAGTGCTGCGCGATGCGGTAGAGTTCCCACTTGTCCA---CCTGCGTC 3974 || ||||| || |||||| | || |||||||| || ||||| || ||| || | || Sbjct 8826 ACCGGCTGGTCACAGTGCCGGGCAATGCGGTACAGGTCCCATTTTGCCAGCGCCAGATTC 8767 Query 3975 ---GCATCCAGCCGGTCTCCGATCCCGAAACGGTCACTTAGCACCAGGTCGTAAAACACC 4031 || | || |||| || || | ||| |||||| | | || |||||| || | | | Sbjct 8766 TCAGCTTTCACCCGGGTACCAATGCTGAACCGGTCATTGATCATCAGGTCATACAGTATC 8707 Query 4032 CATGCGGGATTATTGCTCCAGGCCCATTTAAACGAGCCGTCCCAGGTGCCGGAATAGGTG 4091 || || ||||| | |||| ||||||||||| | || |||| || ||||||||| Sbjct 8706 CACGCCGGATTGTCTGTCCACGCCCATTTAAAGGCCCCTGCCCACACCCCCGAATAGGTG 8647 Query 4092 CGCGCCACCGGATCGTATGTCGTGGGCACGCGGAT-TTGCCGCCCGCGGGCGCGTACGCT 4150 || ||||||| || | ||||| ||||| ||| ||| | | | Sbjct 8646 CGACGGTCCGGATCATAATTATCCGGCACCCGGATAATGCGCATTTTGGGTTCACA-GGA 8588 Query 4151 GATTTGCGGAATATTGCTGAACTGCTTCGCGTTGAACGACACAAAGAGCAGCGCGGTGTT 4210 || ||||| ||||||| |||||| || || | ||| || || | | ||||| | Sbjct 8587 GACCTGCGGGATATTGCGGAACTGTTTGGCATCAAACTGAACGAACAATAAGGCGGTTTC 8528 Query 4211 CGGGTAGCGCAGCTTTGCATCGATGATTTCGGAATACGCTTCGATGTTCGTCGTATCCAC 4270 ||||| | ||| || || || || | |||| | ||||| | | | ||| ||| | Sbjct 8527 GGGGTAACTCAGTTTAGCGTCAATCACCTCGGTAATGGCTTCAACGACCATCGCATCGGC 8468 Query 4271 GATGCGGCTGGAGGTGCTG-TCCGCCGTCGTCCGGCTCACACGAAGCTGCCAGCCGGTCC 4329 || ||| | ||| ||| | | ||| |||| || || | ||||||||| | Sbjct 8467 AATCCGGTTACTGGT-CTGTTTGGGGGTCAGGCGGCGAACCCGCACCTGCCAGCCAGAAT 8409 Query 4330 GGGCAGGCGGAAGGTCAATGCGATGGCTGCGCTCATAGAGGGAGGTGGTTTTACCGTCGA 4389 |||| || | || | ||| || || ||||| || ||| || || || || | Sbjct 8408 GGGCTTTGGGTAAATCGACGCGGTGTGACCGTTCATATTTGGTGGTAGTCTTGCCATCCA 8349 Query 4390 ACGC--GCTGTTCAGCACTGCGACATACCCGCCGCCGTCTGTGGACAGTTCAATTTTGTA 4447 || || || ||| | |||| | || || || |||| || |||||| || Sbjct 8348 CAGCCAGC-GTGGGTAACT-CCTGATACGCCCCCCCATCCGTGGCCACTTCAATCAGATA 8291 Query 4448 TTCAACGCGGTAGCCCACCACATCCCCGTTGTCCTTCATGCGCTGCAGTGAAGGCACACC 4507 |||| ||| ||||| ||| ||||||| || ||| ||||| | ||| || Sbjct 8290 ATCAATGCGATAGCCGACCGTGTCCCCGTCTTCTTTCTGTTTCTGCAATTGCGGC-CA-G 8233 Query 4508 GAGA--CGCACCCGGACCGCAGAGAGCTGCGTATTGCTGATGGCACGCGTCCACGGCTGT 4565 || | || | || ||||| || || || |||||| ||| | | ||| | || Sbjct 8232 GATAACCGAAGGCGCACCGCCGACAGTTGGGTATTGGTGACCGATCTGACCCATGACT-- 8175 Query 4566 GTGGCTTTAAGCTGAGTGTTAACGGTGATTTCATTTTCCACCGACGGTATGCCGGGAATG 4625 | || | | ||| ||||| | |||||||||||| | || ||||||||||| Sbjct 8174 ----CATTTAATTCAGTCCCGACGGTCAGTTCATTTTCCACGGCGGGCATGCCGGGAATA 8119 Query 4626 TAATCCTGCGTCTGGGTACCCGGACGAAATTCCCATTTCACATCGGGAAAATTAAGCGTG 4685 || || || | ||||| || || |||||||| ||||| | ||| || || || Sbjct 8118 TAGTCTTGATGGGGCGTACCGGGGCGGAATTCCCACTTCACCCCCTCAAAGTT-TGCCTG 8060 Query 4686 -CCGTCGGCGCTGCGGATCGGGGTACCGTCGAGGAAAATATCTTTATCCGTCAGGCCGCC 4744 || |||| | | |||||| || || || |||| | | |||| ||||| Sbjct 8059 ACCCTCGGGACCAATCAGCGGGGTGTTATCCAGAAAGATATTAGTGCCGTTCAGCCCGCC 8000 Query 4745 GGCGAACTCCCCCTCGCCCAGCGCCAGCAGTATTTTGGCCGTCGCGATCGACTGTAATGA 4804 || ||||| || || |||||||||| | |||||||| || | |||| || | || Sbjct 7999 CGCAAACTCACCTTCCCCCAGCGCCAATACGATTTTGGCATACGAGGTCGATTGCAGGGA 7940 Query 4805 ATCAGGAGACTCCCGCGGCGTGCGTGAATTACCACCGCCACCCTTTTTACC--GGTTA-- 4860 ||| || || || ||||||||||| | | || ||| ||||| | || | || Sbjct 7939 ATCCGGCGATTCGACCGGCGTGCGTGGACTTTCATTGCCGCCCTTGCTGCCCTGAATAAG 7880 Query 4861 --TTTTTTCCATACTGCGCCCATaaaaaaaGCGCCCGCAGGCGCC------ATTATCA-- 4910 | | ||||| | | |||||||||||||| || || || | | || Sbjct 7879 ATGCTGTCCCATAGTTCACCCATAAAAAAAGCCGCCTGAGCGACCTGACTGAAAAACAAT 7820 Query 4911 GACCGGTTCTCACTGGTCGTTGGTGTAGATGCCGGCAGAGACAATCGCACCGCCGATTTC 4970 || ||| | |||||| | || ||| ||||| || || | || ||||| ||||| Sbjct 7819 GATGCGTTATTGCTGGTCTTCGGCGTAAATGCCCGCCGAAATGATGGCACCCCCGATGCG 7760 Query 4971 GCGCTCGCCATACAGGAGCCCGACGGGGTTACCCATTGCCGTGGTATTCACGGGCCCACC 5030 ||||| ||| ||| | | |||||||| ||| ||| ||| || || || ||||| Sbjct 7759 GCGCTGGCCGTACCCCAACGGAACGGGGTTTCCCTGTGCAATGGAGTTAACCGGGCCACC 7700 Query 5031 GAACGCATAGCTCGGCGCGTTATCGGGGTCCTGACGCGATGCCAGCCCGCCGGGCTGCGG 5090 || ||||| || || ||||| || | || ||||| ||||| ||| ||| Sbjct 7699 AAAGGCATATGAGGGTTTATTGTCGGGATCTTCCCGTCGCGCCAGTCCGCCCGGCATCGG 7640 Query 5091 TGACAGCATCTGCACCACGCCGCCAATCATCATCGA 5126 || ||||||||||| ||||| || | |||||| || Sbjct 7639 GGATAGCATCTGCACGACGCCCCCCAGCATCATGGA 7604 Score = 80.6 bits (88), Expect = 7e-11 Identities = 97/132 (73%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 2987 GTAACTGCTGAGGGTCACGGAGGCTGGCGGTGCCTGCACGCCCGGTGGAATGGCTGATAC 3046 |||| ||||||| || ||| || || | |||||| ||||| || || | || | Sbjct 9936 GTAATTGCTGAGTGTGACGTTCTTCGGTGGCGGCTGCACACCCGGCGGGATCACGGAAAT 9877 Query 3047 CGGACGCTCATCGAGCCGCGCGCCGGAATCGATGGCGGCATATTTATCCGGGTTGTGCTG 3106 || |||||||| || |||| ||||| || ||| || ||||||||||||||||||| Sbjct 9876 GGGCCGCTCATCAAGGCGCGTGCCGGTGTCAATGTGGGTGTATTTATCCGGGTTGTGCTC 9817 Query 3107 CACGGCGCTGAT 3118 |||||| |||| Sbjct 9816 AACGGCGGTGAT 9805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124695692616976