Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq8273 190 2e-43 >seq8273 Length=3386 Score = 190 bits (210), Expect = 2e-43 Identities = 440/659 (67%), Gaps = 12/659 (2%) Strand=Plus/Plus Query 138174 TGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAAT 138233 ||||| || ||||| || || || | || ||||| ||||| ||||||||||||||||| Sbjct 973 TGTTTAGCAACACCGATCGGCCCCATACCTGGACCACCACCACCATGTGGAATACAGAAC 1032 Query 138234 GTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCT 138293 || ||||| || |||| || || || || |||||| | | || | | | |||| Sbjct 1033 GTTTTATGCAAGTTTAAGTGGCAAACGTCAGCACCAATATGGCCCGGACTAGTCAAACCT 1092 Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | ||||| ||||| | ||||||||||||||||||| | |||| ||| Sbjct 1093 ACCTGTGCATTCATGTTTGCTCCATCCATATATACCTGACCACCATTGGCGTGAATGATT 1152 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATA 138413 | ||| | | |||| | |||||||||||||| || ||||| || || | ||| Sbjct 1153 TCACAAACTTCAATGATAGATTCCTCAAATACACCATGTGTAGATGGGTAAGTTACCATT 1212 Query 138414 ATACATGAGAGTTCAAATG-TATTCATGAT----TGCTTTCTTCTCTAGATCTTTGATGT 138468 | |||||||| || |||| | |||||| | || |||| ||| | Sbjct 1213 A-----AAGAGTTCAGGTGAGCAGCATGCTCTTCTGCTTTTGACCTTAAATCTGGGATAT 1267 Query 138469 CTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCAC 138528 | || || ||| |||||||| || || | || ||||||| || ||||| || Sbjct 1268 CAATATTTCCAAGTTCATCACATTTCACTACCACCACTTTCAGACCAGCCATTGAAGCTG 1327 Query 138529 TAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTC 138588 ||||| || || || ||||| || |||| |||| ||| | || | || ||| | Sbjct 1328 ATGCAGGGTTTGTACCGTGTGCAGAAGCTGGAATCAAACAGATGTTACGGCCATGATCGC 1387 Query 138589 CTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTG 138648 | | | |||||| || |||| | | || |||||||| ||||| || | ||||| Sbjct 1388 CGCGGCTCTCATGATAAGCACGGATAACCATTAGACCTGCATATTCACCTTGCGCTCCTG 1447 Query 138649 CGTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGT 138708 || || || || || | ||||||||||||| || ||||||| | | | | Sbjct 1448 AATTTGGCTGGAAGCTCATTTTAGCAAAACCTGTGATCTCTGATAACCAATCGTTCAGCT 1507 Query 138709 CATCTATTATCTTTTGATAACCCATGGTCTGTATC-ATAGGTGTATGTGGATGCACGTTG 138767 || | || |||| |||||| || || ||| | |||| | |||||| | Sbjct 1508 CACCGATCATCTGCATGTAACCCGAAGTTTG-ATCTGTTGGTGCAAATGGATGTAATCCA 1566 Query 138768 GCAAATTCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCA 138826 ||||| |||| | || || ||| ||| |||| ||||| || |||||||| || Sbjct 1567 CCAAATCTCGCCCAGGTAACTGGAGTCATTTCAGCTGTCGCATTCAGCTTCATTGTACA 1625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578895251435040