Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq2795 120 9e-23 >seq2795 Length=11366 Score = 120 bits (132), Expect = 9e-23 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 34798 ATCAACAGCTACAGTTGCACCATCAGGAATGACTGGCTCCATACTGTCTCCTGATGCAGG 34857 || || ||| || || || |||| ||| || | ||| ||||| || || ||| || || Sbjct 11240 ATTAATAGCAACGGTGGCTCCATTAGGTATCAGTGGTTCCATGCTATCCCCTCTCGCCGG 11181 Query 34858 AAAACACAGGACACCAGAACCATCACTATTGGCTCCAACTCGACGGAGCGTTGCTTTTGA 34917 ||||||||| || || | |||||| | |||||||| |||| | | || ||||| || Sbjct 11180 AAAACACAGCACTCCGGTGCCATCAGTGTTGGCTCCTACTCTCCTAAAAGTGGCTTTGGA 11121 Query 34918 AAAGCGCAATTTAAAACCGTTGTGATCCTCATC-GTGTACTCGTCCATCACCACACGCAA 34976 ||| | ||| ||||| ||||||| ||| | || || ||| ||| |||||| |||| Sbjct 11120 AAATCTCAACTTAAAGCCGTTGTAGTCCACGTCAATGCACT-TACCACTACCACAAGCAA 11062 Query 34977 ACTCGATATCCTTCAGAAACGGTACTTCCACCTCATCGTC 35016 |||| ||||| |||| ||| || || || || ||||| || Sbjct 11061 ACTCTATATCTTTCAAAAATGGAACCTCTACTTCATCATC 11022 Score = 86.0 bits (94), Expect = 2e-12 Identities = 187/280 (67%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 39560 TATTTTCGTCGTCGGCGATCTGCATGGGTGCTACACGCTGCTGATGAATGAACTCGAAAA 39619 |||||| || || ||||| ||||| || ||||| ||| ||||| || ||| || | Sbjct 5077 TATTTTTGTGGTTGGCGACCTGCACGGATGCTATCAGCTATTGATGGATAGACTACAACA 5018 Query 39620 GGTTTCGTTCGACCCTGCGTGTGATTTGCTGATTTCGGTTGGAGACCTTGTTGACCGCGG 39679 || || | | |||||| ||||| || || || ||||| ||||| | || Sbjct 5017 TATTGATTTTAATTATAAAAATGATTTACTGATATCAGTAGGCGACCTGATTGACAGGGG 4958 Query 39680 CGCGGAAAACGTCGAGTGCCTGGAGCTGATTACTATGCCTTGGTTCCGGGCTGTGCGAGG 39739 | ||| ||||| || || || ||||| || || |||||| |||| || || || Sbjct 4957 GGATCGAAATGTCGAATGTCTCGACCTGATAACGCAACCGTGGTTCAGGGCGGTTCGGGG 4898 Query 39740 TAACCATGAGCAGATGATGATTGATGGGCTATCGGAGTATGGAAACGTTAACCACTGGCT 39799 || |||||||||||| ||| |||| ||||| | | ||| || ||||| ||| | Sbjct 4897 CAATCATGAGCAGATGGCGATAGATGCGCTATTTCACAACGGAGACAGTAACCTGTGGTT 4838 Query 39800 GGAAAACGGCGGCGTGTGGTTCTTCAGTCTTGATTATGAA 39839 | || ||||| ||||||| | ||| ||| |||| Sbjct 4837 TTACAATGGCGGTCAGTGGTTCCTGCATCTGGATGCTGAA 4798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147533426847488