Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13049 96.9 6e-15 seq10049 87.8 3e-12 seq10950 84.2 4e-11 >seq13049 Length=11502 Score = 96.9 bits (106), Expect = 6e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | || || | || || || | ||| | ||||| || || || || Sbjct 10083 ATGCCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCG 10024 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || |||| || | |||||| |||||||| || | | || ||||| || Sbjct 10023 GACAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGA 9964 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||| || || |||||| ||| || || || | ||||| | ||| Sbjct 9963 GGGGTTCCTTCTTTGTCCTGGATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCG 9904 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| || ||||||||||| | || || | ||| |||||||| || Sbjct 9903 ACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9851 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || || || || |||| |||||| || || || ||||| ||||| Sbjct 10464 TCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTG 10405 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || ||| || || || | ||||| | ||| ||||| ||||| || Sbjct 10404 TCCTGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATC 10345 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||||||| | || || | ||| |||||||| Sbjct 10344 GTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 10310 >seq10049 Length=10599 Score = 87.8 bits (96), Expect = 3e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || || || | || || |||| || | || || || || || || |||| Sbjct 9216 AATATTGTAGTCGGAAAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCG 9275 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || |||||||| || || || || || || || || || | Sbjct 9276 CTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCT 9335 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | ||| ||||| ||||| |||||||||||||| | || || | ||| ||||| Sbjct 9336 ATCAGAGGCTTCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTG 9395 Query 172067 CATTTT 172072 ||| || Sbjct 9396 CATGTT 9401 >seq10950 Length=25243 Score = 84.2 bits (92), Expect = 4e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 171922 ATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTA 171981 ||||| |||| || ||||| | | |||||||| || || |||||||||||||| || | Sbjct 24609 ATTGTATACCGGCGAAAATAAGGCGTTGTTGGTCTGGAGGGATTCCTTCTTTATCCTGGA 24668 Query 171982 TTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTAC 172041 |||| || || || || || |||||| ||| ||||| || || |||||||| | Sbjct 24669 TTTTGGCCTTGACGTTCTCAATGGTGTCTGACCCTTCGACTTCGAGGGTGATGGTTTTTC 24728 Query 172042 CAGTTAATGTTTTAATGAATATCTGCATT 172070 | || || || || | || || |||||| Sbjct 24729 CGGTCAAAGTCTTGACAAAGATTTGCATT 24757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904974750021600