Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_021301.1 Length=56279 Score E Sequences producing significant alignments: (Bits) Value seq10339 298 2e-76 >seq10339 Length=11660 Score = 298 bits (330), Expect = 2e-76 Identities = 1554/2435 (64%), Gaps = 165/2435 (7%) Strand=Plus/Plus Query 41885 ACCCGATGCTGTTGCCGCACCAGCGTGATTTGGTGCGTTGGGCGGTC-GCCGGGGGGCGG 41943 ||||| ||||| |||||||||| | | |||| ||||| || ||| ||| | | Sbjct 5074 ACCCGCTGCTGAAGCCGCACCAGATCGCTGCGGTGATCTGGGCCATCCGCCTGGG--CTG 5131 Query 41944 CG-GGCGATCTTCGCGGCGTTTGGTCTGGGAAAGACGGTGATGCAGTTGGAGATCGTGCG 42002 || |||| | ||| ||| || || ||||| ||||| | ||||||||||||||||||| Sbjct 5132 CGCGGCGCTGTTCATGGCCTTCGGCCTGGGCAAGACCTTCGTGCAGTTGGAGATCGTGCG 5191 Query 42003 CCT-GTCCCTGGCGAAGCACGGCGGCGGTAAAGGTCTGATCGTGATGCCGCTGGGTGTGC 42061 | | || | || | ||| |||||| | || |||||||| || |||||||| |||| Sbjct 5192 CATCGTGCGTGCCC--GCAT--CGGCGGCATGGGCCTGATCGTCATCCCGCTGGGCGTGC 5247 Query 42062 GGATCGAGTTCGCCCACGACGCCGACATGC-TGGGCATTGAAACCCGGTTCGTTCGCCGC 42120 | |||||| || |||||| | || || | ||||| | |||| | |||||| Sbjct 5248 GTCAGGAGTTCATCCGCGACGCGG-CACGCCTTGGCATCACGGTCAAGTTCATCCGCCGC 5306 Query 42121 ACAGAAGAAGTCGGCGGCG---ATGGAATCTATCTCACCAACTATGAGAGTGTCCGCGAC 42177 | || |||| || || | | || ||||| ||||||||||| || | |||||||| Sbjct 5307 ATCGAGGAAGCCGACGACCCGAACGGCATCTACCTCACCAACTACGAAACGATCCGCGAC 5366 Query 42178 GGCAAGCTGGACCCGACACTGTTCACGGCCGTCTCACTCGATGAGGCATCCGTGCTGCGC 42237 |||||||||||||| ||||||| | | | || || ||||| | |||||| Sbjct 5367 CGCAAGCTGGACCCGCTGCTGTTCAGCGTGGCCAGCCTGGACGAGGCGGCATGCCTGCGC 5426 Query 42238 TCGTTCGG--GTCG-AAGACCTACCAGTCGTTCCTGGAGCTGTTCGACGGCG-------- 42286 ||||| | | ||||||| || |||| ||| |||||||| ||||| Sbjct 5427 GGCTTCGGCGGCAGCAAGACCTTCCGCGAGTTCATGGCGCTGTTCGCCGGCGACGACCGG 5486 Query 42287 ----------------------------------TGCCCTATCGGTTTGTCGCCACCGCG 42312 |||| ||||| || || ||||| || Sbjct 5487 CGCGACATGGCCAACCGCGTGAAGAGCGCTGGCGTGCCGTATCGCTTCGTGGCCACGGCC 5546 Query 42313 ACGCCGTCTCCGAATCGCTTCAAGGAGCTGATCCACTACGCGGGCTATCTCGGTGTGATG 42372 ||||| ||| || || |||||| | |||| | || || || |||||| Sbjct 5547 ACGCCCAGTCCAAACGAGTTTGTCGAGCTGCTGGCCTACAGCGCCTTCCTGGGCGTGATG 5606 Query 42373 GACACCGGCGCAGCGTTGACGCGTTGGTTCCAGCGGGACTCCACGAAGGCGAACAACCTC 42432 ||| ||| || |||||||| ||| |||| || | |||||| ||||||| Sbjct 5607 GACGTTGGCCAGGCCAAGACGCGTTTCTTCAAGCGCAACAGCGAGAAGGCCGACAACCTG 5666 Query 42433 ACCCTCTATCCCCACAAG-GAGCGTGAGTTCTTTCTGTGGCTCAACACCTGGGCCGCGTT 42491 || || | ||| | | ||||| || |||| |||||| | | ||||||| ||| Sbjct 5667 ACGCTG-AGCCCAGCGCGCGAGCGCGACTTCTGGCTGTGGGTGGCAAGCTGGGCCCTGTT 5725 Query 42492 CGTGCAATCGCCGGCAGACCTCGGTCACGACGCCACCGGATACGACCTGCCGCCCCTGGA 42551 |||||| ||| | |||||||| || || | ||| ||||| ||||||||| | || Sbjct 5726 CGTGCAGAAGCCCTCGGACCTCGGCTACAGCGACGACGGCTACGAGCTGCCGCCCATCGA 5785 Query 42552 GGTGGTCTGGCATGAGGTTGACCCGCCGGCCGACGAGTTCGATTT---CGAGCGCGACGG 42608 | |||||| ||| | |||| ||| | ||| || | | | ||||| Sbjct 5786 CATCCGCTGGCACGAGAT---CCCGGCGGACCACGCCGACGCTGGTACCAATATGGACGG 5842 Query 42609 GCAGGGCCAGTTGGT---GCGCGGAGTGAACCTCGGGCTACCGCAGGCCGCGGCCGAGAA 42665 |||| ||| || | |||| | | | || | | | | || ||| |||||| Sbjct 5843 CCAGGCGCAGATGTTCAAGCGCCAGGCCATCGGCGTGGT---GGACGCGGCGCGCGAGAA 5899 Query 42666 ACGCCGGTCCCTGGATGCTCGTTTGGCGAAGCTGACCGAGATCGTCACCGATCAC---GC 42722 ||| ||||||||| || |||| ||| ||| ||| | | |||| || || Sbjct 5900 GCGCGACAGCCTGGATGCGCGCGTGGCCAAGATGATGGAGCTGCGCGCCGAGGACCCGGC 5959 Query 42723 CGCACACGGCGAGGGGCAGATCGTCATCTGGTGCGACCTCAACGACGAGCAGCGCGCCAT 42782 ||| ||| | | | |||||| |||||| | || |||| |||||||| Sbjct 5960 CGCCCACCGTGTG------------ATCTGGCACGACCTGGAGGATGAGCGCCGCGCCAT 6007 Query 42783 CGAGAAGGCCCTCGAGGACGCTGGGCTGAGTTTCTCGTCGGTGTACGGGTCGCTCGACCC 42842 |||| ||| || | ||| | | | |||| ||||| | | ||||| Sbjct 6008 CGAGCGCGCCATCCCG-ACGGCCGCCAG-------CGTC----TACGGCACCCAGGACCC 6055 Query 42843 GGA---CGAGGTGGAGCGCCGCTTGGCCGACTGGAAGAACCGCGACACCTACGCGCTGAT 42899 ||| |||| |||| || ||| | || | | || | | | | ||||| Sbjct 6056 GGAGACCGAGCGCGAGCCCCTGGTGGTGGCCTTCAGCGATGGCCTGATCCAGGAGCTGAG 6115 Query 42900 CGGCAAGCCGGTGATGCTCGGACAAGGCATGAACCTTCAGCAGGCACA-CACCTGCG--- 42955 | ||||||| ||| |||| || ||| ||||| |||| ||||| | |||| | Sbjct 6116 CAGCAAGCCCGTGCTGCTGGGCAGCGGCTGCAACCTGCAGC-GGCACTGCGCCTGGGCGA 6174 Query 42956 TCTACATCGGCATTACCCACAAGTTCAACGACCTCATCCAGAGCGTGCACCGGATTCAAC 43015 ||||| | ||||| | ||||||| |||| |||||||| |||||||| | || | Sbjct 6175 TCTACCTGGGCATCGGCTTCAAGTTCGCCGACTTCATCCAGTCGGTGCACCGCCTCCAGC 6234 Query 43016 GGTTCGGCCAAACCCACCCT-TGCACCGCCCATCTCATCCACTCCGAAACCGAACGGGAA 43074 | ||| || || | || ||| | | | || ||| || |||| |||| || || Sbjct 6235 GCTTCCTGCAGACGCGCCAGGTGCGCATCG-ACCTGATCTACACCGAGGCCGAGCGCGAG 6293 Query 43075 GTGGTGCGGGTCATC---CGCGAGAAATGGGCACAACACCGAGAGT---TGACATCAACG 43128 ||| ||| | | ||| |||||||| || ||| ||| || || || Sbjct 6294 GTGCGCCGGACCCTGGAACGC---AAATGGGCCCAGCACAAGGAGCAAGTGGCA----CG 6346 Query 43129 -ATGACCGACATCATTCACGAGTACGGGCTTGACCC-CGAGGCAAT--TTCGGAAGCGCT 43184 ||||| || ||||| | || | |||| ||| | | || ||| || | | || |||| Sbjct 6347 CATGACGGAAATCATCAAGGAATTCGGG-TTGTCGCACGCGGCCATGATCCAGA--CGCT 6403 Query 43185 GCAACGCTCCATCGG-GTGCGAACGCATCGAAGCCTCTGGTGAGGGCTG---GT---TGT 43237 | ||| |||| || ||| || ||| |||| | | |||| | || || Sbjct 6404 GAGCCGCGCCATGGGCGTG-GAGCGCGTCGAGGTGCGCGCGCCGGGCGGCGAGTACGTGC 6462 Query 43238 TCGCCAACAACGACTGCGTGCCCGAAACCGAGTC-CATGG---GCGACAGCTCGGTGGAC 43293 | | |||||||||||||||| ||| || | | | ||||| |||||||| |||| | Sbjct 6463 TGGTCAACAACGACTGCGTGAACGAGAC-GCGCCGCATGGCCAGCGACAGC---GTGGGC 6518 Query 43294 CTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGAC 43353 ||| | | |||||||| || ||| || || ||||||||| |||| | || | |||| Sbjct 6519 CTGGTGCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCCAACTTCGCCGAC 6578 Query 43354 TTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAG 43413 ||||||||||||||| ||||||||| |||| ||||||||||| ||| ||| || Sbjct 6579 TTCGGCCACACCGACAGCAACGCGCACTTCTTCCAGCAGATGGACTTCCTGGTGCCGGAG 6638 Query 43414 CTGCTGCGCATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTG 43473 ||||||||| | || ||||||| | | |||| |||||||||| |||||||| || Sbjct 6639 CTGCTGCGCGTGCTGATGCCGGGCAGGGTGGCCGCCATCCACGTCAAGAACCGCATCGTG 6698 Query 43474 ---TTCGGAAACGTCACCGGCGCCGGCGTGCCCACAGTGTCCCCGTTCCACGCCGAGGCG 43530 ||| | || |||| |||| | | || | || ||| ||| ||| || | Sbjct 6699 CCCAGCGGCATGGTGGAGGGCGTCGGCTTCCAGACCGAGTACCCCTTCGACGTGGACACC 6758 Query 43531 ATCTTCCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGAT 43590 ||| | | |||| ||||||| ||| | | ||| | ||| | |||||||| Sbjct 6759 ATCGCCTGCTTCCGCCGGGCCGGCTTCCACTTCGTGGGCCGCAAGACCATCGTCACCGAC 6818 Query 43591 GTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGCC 43650 |||||||| || ||||||||||| ||||| ||||||| ||||| ||||| || | | Sbjct 6819 GTGGTGCGCGAGAACAACCAGACCTACCGCCTGGGCTACAGCGAGCAATGCAAGGATGGC 6878 Query 43651 ACCAAGATGGGTGTCGGCTCCCCGGAATACGTTCTGCTGTTCCACAAACCGCAAACAGAC 43710 | ||||| ||||| || ||| | ||| | |||| ||| | | || ||| Sbjct 6879 TCGCGCATGGGCTTCGGCATGTGCGAGTACCTGCTGATCTTCCGCAAGGCACCGACCGAC 6938 Query 43711 AGGTCGAAG-GGATACGCCGACACACCCGTCACCAAATCCAAGGACGAATACACCCGTGC 43769 | | | || || |||||| ||||| || ||| ||| ||| | || | Sbjct 6939 -GCCAGCCGCGGCTATGCCGACGTGCCCGTGGTGAAGGACAAAACCGAGTACTCGCGGCC 6997 Query 43770 CCGTTGGCAGGTGGACGCGCACGCGTTCTGGCG-ATCGAGCGGAAACAGGACACTGACAG 43828 || |||||| | ||||| |||| | | ||| | | || || || || ||||| Sbjct 6998 GCGCTGGCAGTTCGACGCCCACGGCTACGCGCGCAGCAAG-GGCGACCGGCTGCTGACGC 7056 Query 43829 CCGACGAGCTCGCCGCGCTGCCACCAGACCAGTTGGCCTCA--CTGTTCACCAAGCACAG 43886 | || ||||| | | || |||| | | | ||| |||||| ||||||| Sbjct 7057 CAGAGGAGCTGGAAGGCCT--CACCCATGCCGACATCTTCAAGCTGTTCCGCAAGCACTC 7114 Query 43887 CCTGAAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAGCAACTCGAAGGTC 43945 ||| || ||||||||||| | || ||| |||| |||||||| ||| || | | | Sbjct 7115 GCTGGAGCGCGTCTACGACTTCGAG-CACGACGTGCGCATCGGCGAGGCGCTGGCCGAGC 7173 Query 43946 GCGGTGCCCTGCCTGCCACGTTCATG--GCCATCGCCCCGGGATCGTGGTCACCTCACGT 44003 |||| ||||| |||| |||||| || ||| | || | ||| || |||| Sbjct 7174 GCGGCATGCTGCCCACCACCTTCATGCTGCTGCAGCCGC-AGAGC-TGGCATCCGGACGT 7231 Query 44004 GTGGCACGACGTGAACCGGATGATCACCTTGAACGGGGAGCAGAAACGCCGCAACG-TCC 44062 ||| |||||||| || ||| ||| | ||| | | |||| || || | | Sbjct 7232 CTGGACCGACGTGACGCGCATGCGCACGCTCAACAGCGCGCAG-TCGGCAGCCGGGCGCG 7290 Query 44063 AAATGCACGTGTGCCCCCTGCAGTTCGACATCGTTGACCGGCTGATCACTCGCTTCTCGA 44122 | |||||| ||||||| ||||||||||||| | |||||| |||||| | | ||| | Sbjct 7291 AGATGCACCTGTGCCCGATGCAGTTCGACATTGCGGACCGGGCGATCACCCAGTACTCCA 7350 Query 44123 ATCCTGGCGAGTTGGTGTTCGACCCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTC 44182 |||||| ||| | |||||| |||||||| ||| || ||||| | |||||| Sbjct 7351 TGAAGGGCGAGGAGGTCTACGACCCCTTCGGCGGCCTGATGACGGTGCCCTACCGGGCTG 7410 Query 44183 TGAAACTTGGTCGCCGCGGCCGTGGTGTCGAGCTG 44217 || || || || |||||||| || ||||||| Sbjct 7411 TGCTGCTGGGCCGGCGCGGCCGCGGCTGCGAGCTG 7445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179940741224184