Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq257 197 1e-45 >seq257 Length=4770 Score = 197 bits (218), Expect = 1e-45 Identities = 231/312 (74%), Gaps = 0/312 (0%) Strand=Plus/Plus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 |||||| || |||||||| | | || | ||||||||||||||||| || ||||| | Sbjct 3727 AGTCTCAGGATTGTCACAAGCGGTGCATAGAACAAACTTGCGGATGAAGCCGTCAAGAAT 3786 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 ||||| | ||| | | ||||| |||||||| ||| |||| ||||| |||| || Sbjct 3787 ATCCTGGAGCTTCGCAGCATCGTGCTCACCGTTGACAATGTATCGCTCGTTCTTGTTGTC 3846 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACG 34499 || | ||| || || || || ||||| ||||| ||||| || |||||| | | ||| || Sbjct 3847 GATGTTCGTCTGAGCTCCAAGTTCGCATCCGAAATACTTCGTAGGGTAAGTAGGCGGTCG 3906 Query 34500 TCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTT 34559 | || | ||| || | |||| ||| ||| |||| ||||||||||| ||||| || || Sbjct 3907 CTCGAGAGACTTCGCAACTTCGACCATATTGGCGATCACAGTCTTGATTCCGTTTCCTTT 3966 Query 34560 TCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATT 34619 ||| || ||||| || |||| || ||||| |||||||||||||| | ||| || || Sbjct 3967 TCCCTCTACCTTAGCCAAGATCCGAGGCATCTTGTAGCGGTAGAAGGGGTCGAGGACGTT 4026 Query 34620 GCGGTTAACGTT 34631 ||| || ||||| Sbjct 4027 GCGATTTACGTT 4038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412769890962236