Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3577 176 7e-38 seq7778 161 2e-33 seq2569 149 1e-29 seq676 145 1e-28 seq10993 138 2e-26 seq5854 114 2e-19 seq2007 109 9e-18 seq2883 107 3e-17 seq13096 96.9 5e-14 seq2970 96.9 5e-14 seq6354 95.1 2e-13 >seq3577 Length=21504 Score = 176 bits (194), Expect = 7e-38 Identities = 180/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||| ||||| ||| | | Sbjct 13198 TGTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGTTCTCCGGGGA 13139 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || ||||| | ||||| || || || | | || || ||||||||| | Sbjct 13138 GGATGAGACGCACAGAAGTCTGAATTTCCCGAGAGGAAATGGTCGAGCGCTTGTTGTAGT 13079 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || || || ||| | ||||||| |||| | ||||||||| |||||||||| Sbjct 13078 GCGCAAGACGCGAAGCTTCGCCGGCGATGCGCTCGAAGACGTCGTTGACGAACGAGTTCA 13019 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | || |||||||| |||||||||||||||||||||||| Sbjct 13018 TGATGGACATGGCCTTCGACGAGATGCCGGTGTCGGGGTGCACCTGCTTGAGCAC 12964 >seq7778 Length=8617 Score = 161 bits (178), Expect = 2e-33 Identities = 179/237 (76%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||||| |||| ||||| ||| | | Sbjct 1031 TGTACTTGGTGACTGCCTTGGTGCCTTCGGAGACGGCGTGCTTGGCGAGTTCACCGGGGA 1090 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || || |||| || || || ||||||| ||| || || |||| |||| Sbjct 1091 GAATAAGACGGACGGAAGTTTGAATTTCGCGGGACGAGATAGTTGAACGTTTGTTGTAGT 1150 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || ||| |||||| |||| || |||| | |||||||||||| ||||| Sbjct 1151 GGGCG--AGTCGGGAGGCCTCCTGAGCGATACGCTCGAAGACGTCGTTGACAAAGGAGTT 1208 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||||| ||||| | |||| ||| ||||| ||||||||||||||||||||| || Sbjct 1209 CATGATGGACATGGCTTTGGAGGATATGCCGGTGTCGGGGTGCACCTGCTTGAGGAC 1265 >seq2569 Length=10691 Score = 149 bits (164), Expect = 1e-29 Identities = 181/245 (74%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || |||||||||||||| ||||| || ||||||||| | | || || ||| | | Sbjct 3431 TGTATTTTGTGACGGCCTTGGTTCCCTCAGAAACGGCGTGCTTCGACAACTCTCCGGGAA 3372 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587 ||| || || |||| | ||||| ||||||| ||||||| |||||||| | | Sbjct 3371 GGATGAGACGGACGGAAGATTGGATTTCGCGGGACGAGATCGTGGATCGCTTGTTGTAAT 3312 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | ||| || || |||||||| ||||||| |||| | ||| |||||||| ||||| Sbjct 3311 GAGCG--AGACGAGAAGCCTCGGTAGCGATGCGTTCGAAGACGTCATTGACAAAGGAGTT 3254 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | || ||||| || ||||||||| |||||||||||||| Sbjct 3253 CATGATGGACATGGCCTTCGATGAGATTCCGGTGTCGGGGTGGACCTGCTTGAGCACACG 3194 Query 1485708 GTAAA 1485712 ||||| Sbjct 3193 GTAAA 3189 >seq676 Length=604 Score = 145 bits (160), Expect = 1e-28 Identities = 185/253 (73%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1485478 GTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGG 1485537 || ||||||||||| || || || ||||||||| |||||| |||||| | | || ||| Sbjct 1 GTAACGGCCTTGGTTCCTTCGGATACGGCGTGCTTGGCCAACTCGCCGGGGAGAATAAGG 60 Query 1485538 CGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGTGCGCGCCA 1485595 || || | |||||||| ||||||| ||| || |||||||| ||||| ||| | Sbjct 61 CGTACAGATGTCTGGATTTCGCGGGACGAGATGGTCGAGCGCTTGTTGTAGTGTGCG--A 118 Query 1485596 GGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCG 1485655 | || | ||| ||| || | ||||| || | | ||| ||||| || ||||||||||||| Sbjct 119 GACGACTGGCTTCGTTGGCTATGCGCTCAAAGACGTCATTGACGAATGAGTTCATGATCG 178 Query 1485656 ACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACAA 1485715 |||| | || ||||| || ||| |||||||| ||||||||||| ||| || Sbjct 179 ACATGGCCTTCGACGAGATTCCGGTGTCAGGGTGCACTTGCTTGAGCACACGGTAGACGT 238 Query 1485716 AGGACGAGTACGA 1485728 || |||||||| Sbjct 239 AGACGGAGTACGA 251 >seq10993 Length=14660 Score = 138 bits (152), Expect = 2e-26 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| |||||||||||| |||||| || || ||| Sbjct 10477 TGTACTTGGTGACGGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCCAACTCTCCAGGCA 10536 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| || |||| ||| ||||| ||||| | | |||||| |||||||| || | Sbjct 10537 GAATCAGCCGGACGGAGGTTTGGATTTCGCGCGAGGAGATCGTCGAACGCTTGTT-GTAC 10595 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | || || ||| || | ||||||| || | | ||||||||| || || ||| Sbjct 10596 TGTGCGAGCTTCGAGGCTTCACCGGCGATGCGTTCAAAGACGTCGTTGACGAAGGAATTC 10655 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCA 1485691 ||||| ||||||| ||| |||||| || ||| ||||||| Sbjct 10656 ATGATTGACATCGCCTTGGAGGAGATACCGGTGTCAGGGTGCA 10698 >seq5854 Length=26239 Score = 114 bits (126), Expect = 2e-19 Identities = 145/197 (74%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGA-CAAGGCCTTTTGCGAGGTCGACCAACC 2035624 || |||||||||||||||||| | | |||||| ||| | || |||||||||| Sbjct 17604 GAAAAGCGCACCGACGACATTCCCCAGTGGGATCAACAATTCATGA-AGGTCGACCAGGG 17546 Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 || ||||| || | ||||| ||||| |||||| | || ||| |||||| || | Sbjct 17545 AACGCTCTTCGAACTCATCCTGGCCGCTAACTACATGGAGATCCGAGGCCTCCTGGACAT 17486 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 || |||||||| ||||| || | |||||||| ||||||||||| || || ||| || Sbjct 17485 CGGTTGCAAGACTGTGGCTAATATGATCAAGGGAAAGTCGCCCGAAGAGATTCGCCGCAC 17426 Query 2035745 CTTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 17425 TTTCAACATCAAGAACG 17409 >seq2007 Length=27052 Score = 109 bits (120), Expect = 9e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 118709 GGCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGAT 118768 ||||||||| ||||| |||||||||||| | || | || ||| || |||| Sbjct 25191 GGCGATCTGTTTTGTGAGACGCTCCTGCACCTGAAGACGACGGGCGAACATCTCAACGAC 25250 Query 118769 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTT 118828 ||| | || |||||| || || | ||| | ||||||||| || | |||| | || Sbjct 25251 GCGAGCGAGCTTGCTGAGCCCCAGAATCTTCTTGTTGGGCAGGTATCCGATGTGCACTTT 25310 Query 118829 GCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGT 118888 ||||| ||||||| || ||||||||||| | ||||| || || |||||||||||| Sbjct 25311 TCCGATGAAGGGCACAAGGTGGTGCTCGCAGAGCGAGAAGAACTCGATGTCGCGCACGAG 25370 Query 118889 CACCATCTCG 118898 |||||||||| Sbjct 25371 CACCATCTCG 25380 >seq2883 Length=17051 Score = 107 bits (118), Expect = 3e-17 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||| ||| | ||| ||||| || |||||||||||| ||| || ||| || | | Sbjct 1840 GTACTTGGCGACAGACTTCGTACCTTCGGAGACGGCGTGCTTGGACAATTCTCCAGGAAG 1781 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG--CTTGTTAGTG 1485588 ||| || || || || |||||||| ||||||| ||| | || || |||| | || Sbjct 1780 GATGAGACGAACTGCAGTCTGGATTTCGCGGGA--CGACAGCGTGGCCTTCTTGGTGATG 1723 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | || ||| || || | |||| || || | ||||||| || | |||||| Sbjct 1722 TTGGTGAGACGGGAAGCTTCTTGGGCGATACGCTCAAACATGTCGATGCACATGGAGTTC 1663 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 ||||||||||| | |||| |||||||||| ||| || || || ||||| Sbjct 1662 ATGATCGACATGGCTTTGCCGGAGATGCCCTTGTCCGGATGGACTTGCTT 1613 >seq13096 Length=950 Score = 96.9 bits (106), Expect = 5e-14 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 118801 CCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCAGATGGTGCTCGCACA 118860 ||| ||| | |||| | ||||||||||||||||| || |||||||| ||||||||||||| Sbjct 484 CCGTGGGGATGTAGGCAACGTGCGCCTTGCCGATGAACGGCAGCAGGTGGTGCTCGCACA 425 Query 118861 TGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCG 118898 || | | || |||||||| ||| ||||||||||| Sbjct 424 ACGAATACAGCTCGATGTCGCGTACGATCACCATCTCG 387 >seq2970 Length=5607 Score = 96.9 bits (106), Expect = 5e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||| ||| | ||| ||||| || |||||||||||| | | |||||| || | | Sbjct 4168 TACTTGGCGACAGACTTCGTACCTTCGGAGACGGCGTGCTTCGACAGTTCCCCAGGAAGA 4109 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG--CTTGTTAGTGC 1485589 || || || || || ||||||| ||||| | |||| | || || ||| || || Sbjct 4108 ATGAGACGAACAGCAGTCTGGACTTCGCGAGA--CGATAGCGTGGCCTTCTTCGTAATGT 4051 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || || | |||| || || | ||||||| || | ||||||| Sbjct 4050 TGGTGAGGCGAGAAGCTTCCTGGGCGATACGCTCAAACATGTCGATGCACATGGAGTTCA 3991 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 |||||||||| | |||| |||||||||| ||| || || || ||||| Sbjct 3990 TGATCGACATGGCTTTGCCGGAGATGCCCTTGTCCGGATGGACTTGCTT 3942 >seq6354 Length=9978 Score = 95.1 bits (104), Expect = 2e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||| | ||| | ||| || || || |||||||||||| ||| || ||| || | | Sbjct 8262 GTACTTCGCGACAGACTTCGTGCCTTCGGAGACGGCGTGCTTGGACAATTCTCCAGGAAG 8203 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCG--CTTGTTAGTG 1485588 ||| || || || || ||||| || ||||||| ||| | || || |||| | || Sbjct 8202 GATAAGACGAACAGCAGTCTGAATTTCGCGGGA--CGACAGCGTGGCCTTCTTGGTGATG 8145 Query 1485589 CGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | || ||| || || | |||| || || | ||||||| || | |||||| Sbjct 8144 TTGGTGAGACGGGAAGCTTCTTGGGCGATACGCTCAAACATGTCGATGCACATGGAGTTC 8085 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTT 1485698 ||||||||||| | |||| |||||||||| ||| || || || ||||| Sbjct 8084 ATGATCGACATGGCTTTGCCGGAGATGCCCTTGTCCGGATGGACTTGCTT 8035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914730349756628