Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_022330.1 Length=76586 Score E Sequences producing significant alignments: (Bits) Value seq1506 233 9e-57 >seq1506 Length=1124 Score = 233 bits (258), Expect = 9e-57 Identities = 329/461 (71%), Gaps = 16/461 (3%) Strand=Plus/Minus Query 66161 GCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCT 66220 |||||||||||||| || || | |||||| | || ||||||||||| || || || Sbjct 462 GCTCTGGGCATCGGCGGCCTGCCAAAGGGCCGTATCGTCGAAATCTACGGTCCTGAGTCG 403 Query 66221 TCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAAC 66280 || || ||| | || ||| || | | | ||| | || || || ||||| | || | Sbjct 402 TCGGGTAAGACCACGCTGACCCTGTCGGTGATCGCCCAGGCACAAAAAGCCGGCGCCACC 343 Query 66281 GCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGC--GCTCGGTG 66338 ||| | | ||||||| |||||| |||| ||||||||||||||| ||| ||| || | Sbjct 342 TGCGCATTCGTCGACGCCGAGCACGCCCTCGACCCCGAGTACGCC--GGCAAGCTGGGCG 285 Query 66339 TGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCG 66398 | | ||||| |||| |||| ||||||||||| || |||||||||||||| ||| Sbjct 284 TCAATGTCGACGACCTGCTGGTCTCGCAGCCGGACACCGGTGAGCAGGCCCTGGAAATCA 225 Query 66399 TTGACCTCCTCGT------CAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGG 66452 ||| | || || ||| | | ||| || |||||||| |||| |||| Sbjct 224 CCGACATGCTGGTGCGCTCCAACGCCGTCGACGTGATCATCGTCG------ACTCCGTGG 171 Query 66453 CGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGC 66512 |||||||||| || |||||| |||||||||| || || |||| ||||| ||||||| Sbjct 170 CGGCCCTGGTACCCAAGGCCGAGATCGAAGGCGAAATGGGCGACATGCACGTGGGCCTGC 111 Query 66513 ACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACA 66572 | || ||||| ||||| ||||| |||||||| |||| |||| |||| | | ||||| Sbjct 110 AGGCTCGCCTGATGTCCCAGGCACTGCGCAAGATCACCGGCAACATCAAGAACGCCAACT 51 Query 66573 CGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 66613 ||| | ||| |||||||| | ||| |||||||||| Sbjct 50 GCCTGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGC 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244907853034084