Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq12388 150 1e-31 seq7750 134 9e-27 seq13049 132 3e-26 seq10049 127 1e-24 seq8226 114 8e-21 >seq12388 Length=21549 Score = 150 bits (166), Expect = 1e-31 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || ||||| |||||| |||| |||| || || ||||| |||||||| Sbjct 15472 CTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAA 15413 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||||||| | || | || |||||||| | ||||| |||||| Sbjct 15412 GATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTT 15353 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || ||| ||| ||||| || | ||| || || || || |||||||||||||| Sbjct 15352 TTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTACCAGTGAGGGTCTTTAC 15293 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 15292 AAAGATCTGCATG 15280 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || ||||||||||| || || || || ||| |||| |||| Sbjct 16001 AGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCT 15942 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||| || || || || || | || | ||||||||||| Sbjct 15941 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCC 15882 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || || ||| ||||| || | ||| || || Sbjct 15881 TGGATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGTT 15822 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || | ||||| ||||| || |||||| Sbjct 15821 TTACCAGTCAACGTCTTGACAAAAATTTGCATG 15789 >seq7750 Length=8304 Score = 134 bits (148), Expect = 9e-27 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | || || || || || |||| ||| ||||||||| ||||| ||||| | Sbjct 993 TTCCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 1052 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || ||||| |||| || || ||||||||||||||||||| |||||||| ||| | | Sbjct 1053 AAAGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAG 1112 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || || ||||| | | || | || || |||| Sbjct 1113 GAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGA 1172 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||| || ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 1173 CCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 1221 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || || |||| ||| ||||||||||||||| ||||| || || | || | || Sbjct 782 AGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCGTCT 841 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| |||||||| ||| | || | || || ||||| Sbjct 842 TCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGAATTCCTTCTTTGTCC 901 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | | || | || || ||||| |||| || ||||| Sbjct 902 TGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGTT 961 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| || ||||||||||| Sbjct 962 TTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 993 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | | | ||| |||| || | |||| ||||||||||||||| || || | Sbjct 1495 TTCCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGG 1554 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || | || || |||||||||||||||||||||| || ||||| ||| ||| Sbjct 1555 AGAGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCG 1614 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || ||||| || | || || |||||| | || | || || || | Sbjct 1615 GAATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGATGCTTCAA 1674 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || |||||||| ||||||||||| || ||||||||||| Sbjct 1675 CTTCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 1723 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || |||||||| ||||| || || | || | || || || |||||||||||||| Sbjct 2745 CTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAA 2804 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || |||||| | || | || |||||||| | || || || ||| Sbjct 2805 GATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTT 2864 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| ||| || || || | ||| ||||||||||| || || ||||| || Sbjct 2865 CTCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCAC 2924 Query 34966 AAAGATCTGCAT 34977 |||||| ||||| Sbjct 2925 AAAGATTTGCAT 2936 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 34824 CGTCCAG-TTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 ||||||| || ||| ||||||||||||| || || |||||| | || | || |||||| Sbjct 1341 CGTCCAGATTACTTACCGGCGAAGATCAAGCGCTGTTGGTCTGGGGGAATTCCTTCCTTG 1400 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | ||||| ||||| | | || | ||| || ||||| |||| ||| ||| Sbjct 1401 TCCTGGATTTTGGCCTTGACATTTTCGATTGTGTCAGACGCTTCGACCTCAAGGGTAATG 1460 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || | || ||||| ||||||||||| Sbjct 1461 GTCTTTCCGGTCAAAGTTTTTACGAAGATCTGCAT 1495 >seq13049 Length=11502 Score = 132 bits (146), Expect = 3e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || || ||| |||| |||| || || |||||||| || || Sbjct 10273 CTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAA 10214 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||||||| | || | || |||||||| | ||||| ||||||| Sbjct 10213 GATAAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATTTTGGCTTTGACGTT 10154 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || ||| ||| ||||| || | ||| || ||||| || || |||||||| || Sbjct 10153 CTCAATACTATCAGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGAC 10094 Query 34966 AAAGATCTGCATG 34978 ||||||||||||| Sbjct 10093 AAAGATCTGCATG 10081 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || || || ||| |||| |||| || ||||| || || || || Sbjct 7385 CTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAA 7326 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || |||||||||||| | || | ||||| ||||| | ||||| |||||| Sbjct 7325 GATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTT 7266 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || || ||| ||||| || | || || || || || ||||||||||| || Sbjct 7265 TTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCAC 7206 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 7205 GAAGATCTGCATG 7193 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | || ||||| || ||||| ||||| || ||| |||| |||| Sbjct 10521 AGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCC 10462 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| |||||||||||||||| ||| || || || | || | ||||| ||||| Sbjct 10461 TCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTCC 10402 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||||| | || || ||| ||||| || | || || || Sbjct 10401 TGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTT 10342 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 10341 TTACCAGTGAGGGTCTTCACGAAGATCTGCATG 10309 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || || || || ||||| ||||| || | | |||| | || Sbjct 10065 AGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCT 10006 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || |||||||||||| | || || || ||||| Sbjct 10005 TCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCC 9946 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| ||||||| | || || ||| ||||| || | || || || Sbjct 9945 TGGATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTT 9886 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 9885 TTACCAGTGAGGGTCTTCACGAAGATCTGCATG 9853 >seq10049 Length=10599 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| |||||||||||| || ||||| || || | || | || Sbjct 9187 AGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCT 9246 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| ||| ||||||||| |||| | || |||||||| Sbjct 9247 TCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCC 9306 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || ||| ||| ||||| || | || ||||| Sbjct 9307 TGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATGGTT 9366 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || ||||||||||| || |||||||||||| Sbjct 9367 TTACCAGTGAGGGTCTTCACGAAGATCTGCATG 9399 >seq8226 Length=1064 Score = 114 bits (126), Expect = 8e-21 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || || || || ||| |||| |||| |||| || ||||||||||| Sbjct 821 CTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCTTCCAACTGTTTTCCGGCGAA 880 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 881 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 940 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || ||| ||| ||||| || | || || || || || || | ||||| || Sbjct 941 TTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATTGTTTTACCAGTCAACGTCTTGAC 1000 Query 34966 AAAGATCTGCATG 34978 |||||| |||||| Sbjct 1001 AAAGATTTGCATG 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325636228381988