Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_023555.1 Length=43017 Score E Sequences producing significant alignments: (Bits) Value seq10737 136 1e-27 >seq10737 Length=14001 Score = 136 bits (150), Expect = 1e-27 Identities = 333/498 (67%), Gaps = 14/498 (3%) Strand=Plus/Plus Query 6033 GCCATCACGGAGGTTATCGACGCACGTTTTCGATACCCGCATACCGCCTTGTTGTTTATC 6092 ||||| || ||||| || ||||| | | ||||| | |||||||| ||||| | Sbjct 8489 GCCATTACCGAGGTGATTGACGCTAAACTGAGTTACCCCGAAACCGCCTTATTGTTCGTT 8548 Query 6093 GAGTTCAACGCAAAATCATTCCAGAATATCCCGAAAATATCGTGCCTGGCCAAAGGGCGT 6152 |||| | || ||| |||| ||||||||| | | || || ||||| ||| Sbjct 8549 CAGTTTGATGCCAAACAGTTCCGCAATATCCCGCAGGTCTCCTGTGAACCCAAAATGCGC 8608 Query 6153 ATTATCCGAGTACCAAGTAACTATGACCCAGACACCCGCACCTATTCCGGCAATTGGGAT 6212 |||||||| || || ||| ||||| || ||| ||||||||||| || |||| Sbjct 8609 ATTATCCGGGTGCCGGATAATTATGATCCGGACCGTCGCACCTATTCGGGGGTGTGGGCA 8668 Query 6213 GGGTCGTTTAAATGGGCCTACACCAACAATCCGGCGTGGGTATGGTACGACGTATTGACT 6272 ||| | ||||||||||| | || |||||||||||||| || ||| ||| | ||| | Sbjct 8669 GGGGCCTTTAAATGGGCGTGGACAGACAATCCGGCGTGGATACTGTATGACCTGATGA-T 8727 Query 6273 CAA-CCGCGGTTCGGGCTTGGTAAGCGCGTTACGGCGGCCA------TGCTAGATAAATG 6325 ||| |||||| | |||||| || || | || | | ||| | ||||| Sbjct 8728 CAATGACCGGTTCAGCATTGGTACCCGGGTGAAAGCTGAGAATCTGGCGCTGGCAAAATG 8787 Query 6326 GGAGTTGTACCGCATCGCACAGCGCTGCGATCAGATGGTGCCGGATGGTGCCGGTGGTGT 6385 ||| |||||||||| || | || ||| || ||| |||||||||||| || || | Sbjct 8788 GGACCTGTACCGCATTGCCCGGCACTGTGACCAGCCGGTGCCGGATGGCAAAGGGGGGAT 8847 Query 6386 TGAGCCGCGTTTCGAGTTCAACTGT-TATTTGCAGGCGCAGGCCGATGCCTGGACGGTGA 6444 |||||| | | | ||| ||| ||| | ||| |||| | || |||||||| || Sbjct 8848 GGAGCCGAGACACACCTGCAA-TGTCTATATTCAGTCGCAAGAGGACGCCTGGACTGTCC 8906 Query 6445 TCCGTGATATCGCGGCGGGA--TTTAACGGGCTGACGTATTGGGGAAACAACATGTTCAA 6502 | || ||||| | ||| | || ||||| |||| | |||| ||||| | | || Sbjct 8907 TGCGGGATAT--TGTCGGTATCTTCAACGGCATGACCTTCTGGGCGAACAATAACATGAA 8964 Query 6503 TGTGGTTTCCGATATGCC 6520 |||| | | |||||||| Sbjct 8965 TGTGCTGGCGGATATGCC 8982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137509523605096