Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7750 105 4e-18 seq13049 102 5e-17 >seq7750 Length=8304 Score = 105 bits (116), Expect = 4e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| | ||| ||| || || |||||||||||||||||||| || |||| || Sbjct 1515 ACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGGAGAGTGTACGACCGTCCTCG 1574 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||| |||||||| || ||||| |||||||||||| |||| | ||||| || || Sbjct 1575 AGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGG 1634 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | | || | || | |||||| || ||| || || | ||||| || || Sbjct 1635 ATCTT-GGCCTTGACGTTCTCGATAGTGTCGGATGCTTCAACTTCCAGAGTGATTGTCTT 1693 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||||||||| Sbjct 1694 TCCGGTGAGGGTCTTAACGAAGATCTGCAT 1723 Score = 95.1 bits (104), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||| | || | ||| ||||| ||||||||| ||| Sbjct 2698 AAAATCTGCATTCCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATG 2757 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 ||||| |||||||| || || |||| || | || |||||||| || ||||||||||| Sbjct 2758 TTGTAGTCGGAGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGT 2817 Query 33631 TGATCTTGCGGCACACCTTCTTTGTC 33656 || ||| | || | ||||| ||||| Sbjct 2818 TGGTCTGGGGGAATTCCTTCCTTGTC 2843 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| |||||||| || || |||| || | || |||||||| || Sbjct 802 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAA 861 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| || ||||||||| | || | ||||||||||| || || | | |||| Sbjct 862 GATCAAGCGTTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTT-GGCCTTGACAT 920 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | |||||| | ||| || |||| ||||| ||||| || || | || || | Sbjct 921 TTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGA 980 Query 33737 CAAAGATCTGCAT 33749 | ||||||||||| Sbjct 981 CGAAGATCTGCAT 993 >seq13049 Length=11502 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || ||||| || |||||||||||||| || || Sbjct 10536 CCACCACGGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGAC 10477 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | |||||||||||| || ||||| ||||| ||||| | || Sbjct 10476 AGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGG 10417 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||| || | || || | || | | |||| | ||| || Sbjct 10416 ATTCCCTCTTTGTCCTGAATCTT-GGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGAC 10358 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||||||||||| || | || || || ||||||||||| Sbjct 10357 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 10310 Score = 98.7 bits (108), Expect = 7e-16 Identities = 164/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || ||||| |||||||| |||||||| ||||| Sbjct 10080 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGAC 10021 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| || | |||||| || ||||| || | ||| ||||| ||| | || Sbjct 10020 AAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGG 9961 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 ||||||||||| ||||| | || || | || | | |||| | ||| || Sbjct 9960 GTTCCTTCTTTGTCCTGGATTTT-AGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGAC 9902 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 || | |||||||||||||| || | || || || ||||||||||| |||| Sbjct 9901 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT-GTTG 9850 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || || ||| || || ||||||||||| || Sbjct 7421 ACCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGA 7362 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | |||||| || ||||| || | ||| ||||| ||| | || Sbjct 7361 GAGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGG 7302 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || |||||||| ||||| | | || | || | | |||| | ||| | Sbjct 7301 AATGCCCTCTTTGTCCTGGATTTT-GGCCTTGACGTTTTCAATGCTGTCTGAGGCTTCGA 7243 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754 | || | |||||||||||||| || | || || || ||||||||||| |||| Sbjct 7242 CTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT-GTTG 7190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328646905347840