Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7750 123 6e-23 seq12388 98.7 2e-15 seq10049 96.9 8e-15 seq8226 96.9 8e-15 seq13049 93.3 1e-13 >seq7750 Length=8304 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| |||||||| |||||| | || || ||| || ||| Sbjct 990 CAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTCCGAC 931 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| ||||| || ||| ||||| || || |||||||||||| || || ||| Sbjct 930 ACAATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAGCAA 871 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||||||||||||| | ||||| || | ||| | |||| |||||| | Sbjct 870 CGCTTGATCTTCGCCGGAAAGCAGCTTGAAGACGGTCGTACTCTCTCCGACTACAACATT 811 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || ||||| || ||| | | ||||| Sbjct 810 CAGAAGGAGTCGACCCTTCATCTCGTTCTTCGTCTTCG 773 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| |||||||| |||||| | || || ||| || ||| Sbjct 1218 CAGATCTTCGTCAAGACACTCACCGGAAAAACCATCACTCTTGAGGTCGAAGCGTCCGAC 1159 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| ||||| || ||| ||||| || || || ||||||||| || || ||| Sbjct 1158 ACAATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCAGATCAGCAA 1099 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||||||||||||| | |||||||| | ||| | | || |||||| || Sbjct 1098 CGGTTGATCTTCGCCGGAAAGCAGCTCGAAGATGGGCGCACTCTTTCTGACTACAACATC 1039 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || ||||| || ||| Sbjct 1038 CAGAAGGAGTCGACCCTTCATCTCGTT 1012 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || || || | || || ||| ||||||||| |||| Sbjct 2921 AAGACTCTTACTGGAAAGACCATTACCCTCGAGGTAGAAGCCTCTGACACAATCGAGAAC 2862 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||||||| || ||| || | | |||||| Sbjct 2861 GTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAACAGCGTTTGATCTTC 2802 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | ||||| || | ||| | |||| |||||| | || |||||||| Sbjct 2801 GCCGGAAAGCAGCTTGAAGACGGCCGTACTCTCTCCGACTACAACATTCAAAAAGAGTCA 2742 Query 206365 ACTCTTCACCTTGTT 206379 |||||||| |||||| Sbjct 2741 ACTCTTCATCTTGTT 2727 Score = 89.7 bits (98), Expect = 1e-12 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| || ||||| || ||||| ||||||| || ||||||| | ||| | |||||||| Sbjct 1012 AACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATCTTC 1071 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||||||||||| | |||||| ||| Sbjct 1072 GAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGA 1105 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| ||||| || |||||| ||||||| ||| || ||||| |||| Sbjct 1708 AAGACCCTCACCGGAAAGACAATCACTCTGGAAGTTGAAGCATCCGACACTATCGAGAAC 1649 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||||||| ||| || || | | |||||| Sbjct 1648 GTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCGCCAGATCAGCAGCGCTTGATCTTC 1589 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | || || || | || | ||||||||||| | ||||| ||||| Sbjct 1588 GCCGGAAAGCAACTCGAGGACGGTCGTACACTCTCCGATTACAACATTCAGAAGGAGTCC 1529 Query 206365 AC 206366 || Sbjct 1528 AC 1527 >seq12388 Length=21549 Score = 98.7 bits (108), Expect = 2e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| || ||||||||||| | ||||| ||| ||||| Sbjct 15284 CAGATCTTTGTAAAGACCCTCACTGGTAAAACGATCACCCTAGAAGTCGAAGCCTCTGAT 15343 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||| || || ||||| || ||||||||| || ||| ||| Sbjct 15344 AGTATTGAAAACGTCAAGGCCAAAATCCAAGACAAGGAAGGAATTCCTCCAGACCAGCAA 15403 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| |||||| | |||||||| | || | | || ||||| | Sbjct 15404 CGTCTTATCTTCGCCGGGAAGCAGCTTGAAGATGGCCGCACCCTATCTGACTACAATATT 15463 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || || || || ||| Sbjct 15464 CAGAAGGAGTCAACCCTCCATCTCGTT 15490 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/203 (70%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| ||| | || || ||||||||||| | ||||| ||| || |||| | Sbjct 15798 TTTTGTCAAGACGTTGACTGGTAAAACGATCACCCTCGAAGTCGAAGCCTCAGACAGCAT 15857 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 || || ||||| ||| || || || || || ||||| || || || | | Sbjct 15858 TGAGAACGTCAAAGCCAAA-ATCCAGGACAAGGAGGGAATCCCTCCCGATCAACAGCGTC 15916 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | |||||||||||||||||| | |||||||| | || || | |||||||| | |||| Sbjct 15917 TCATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGCACCCTGTCTGATTACAATATTCAGA 15976 Query 206357 AAGAGTCTACTCTTCACCTTGTT 206379 | || || ||||||||| | ||| Sbjct 15977 AGGAATCGACTCTTCACTTGGTT 15999 Score = 84.2 bits (92), Expect = 5e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| | ||||||||| || || ||||| | ||| || |||| || || | |||||||| Sbjct 15999 AACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTC 15940 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||||||||||| || || |||||| Sbjct 15939 AAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGA 15906 >seq10049 Length=10599 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||| |||||| | ||||| ||| ||||| | | || Sbjct 9383 AAGACCCTCACTGGTAAAACCATCACTCTCGAAGTCGAAGCCTCTGATAGCATTGAGAAC 9324 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || |||||||| ||| ||| || || | |||||| Sbjct 9323 GTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCGCCAGACCAGCAGCGATTGATCTTC 9264 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 |||||||||||| | ||||| || | ||| | |||| ||||| | ||||| ||||| Sbjct 9263 GCCGGAAAGCAGCTTGAAGACGGTCGTACTCTTTCCGACTACAATATTCAGAAGGAGTCA 9204 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| ||| | | ||||| Sbjct 9203 ACCCTCCACCTCGTTCTCCGTCTTCG 9178 >seq8226 Length=1064 Score = 96.9 bits (106), Expect = 8e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| ||| | || || ||||| |||||| | ||||| ||| ||||| Sbjct 1009 CAAATCTTTGTCAAGACGTTGACTGGTAAAACAATCACTCTCGAAGTCGAAGCCTCTGAT 950 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||| |||||||| || || || || ||| || ||| || Sbjct 949 AGCATTGAAAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 890 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | |||||||||||||| |||||||||||||| | || | | |||||||| | Sbjct 889 CGATTGATCTTCGCCGGAAAACAGTTGGAAGATGGCCGCACCCTTTCTGATTACAATATT 830 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || || || || ||| | | ||||| Sbjct 829 CAGAAGGAGTCAACCCTCCATCTCGTTCTCCGTCTTCG 792 >seq13049 Length=11502 Score = 93.3 bits (102), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGTCGAATC 206243 || || ||||| || |||||||||||| | ||||| ||| || |||| || | | | Sbjct 9869 AAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCCTCAGACAGCATTGAGAAC 9928 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 ||||| ||| || || || |||||||||| || ||| ||| | |||||||| Sbjct 9929 GTCAAAGCTAAA-ATCCAGGACAAAGAAGGAACCCCTCCAGACCAGCAACGTCTTATCTT 9987 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || | ||||| || | || ||| |||| |||||| |||| ||||| || Sbjct 9988 TGCTGGCAAACAACTTGAAGACGGCCGCACCTTGTCCGACTACAACATCCAAAAAGAATC 10047 Query 206364 TACTCTTCAC 206373 ||||||||| Sbjct 10048 GACTCTTCAC 10057 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || |||||||||||| | ||||| ||| || |||| | ||| Sbjct 7209 AAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCCTCAGACAGCATTGAAAAC 7268 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || || || ||||| || ||| || ||| ||| | |||||||| Sbjct 7269 GTCAAGGCCAAAATCCAGGACAAAGAGGGCATTCCTCCAGACCAGCAACGTCTTATCTTT 7328 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || | |||||||| | || | | ||||||||| ||||||| ||||| Sbjct 7329 GCTGGCAAACAACTTGAAGATGGCCGCACCCTCTCTGATTACAACATCCAGAAGGAGTCA 7388 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || ||| | | ||||| Sbjct 7389 ACACTCCATCTCGTTCTCCGTCTTCG 7414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181604995090092