Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq2795 141 4e-29 seq10737 95.1 5e-15 >seq2795 Length=11366 Score = 141 bits (156), Expect = 4e-29 Identities = 204/285 (72%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 8666 ATGGCGTAGAGTTTGCCGTCAACAATACGTTTGTTGTTTGTGTCTACTGCGATTGTTGTT 8725 || ||||||| ||| || || ||||| ||| | ||| | | || | || | | Sbjct 11281 ATTGCGTAGACTTTTCCATCTACAATTTTTTTATCGTTACAATTAATAGCAACGGTGGCT 11222 Query 8726 CCATCTGGTATCACGGGTTCCATGCTATCACCAGTAGCCGGAAAACAAAGCACACCAGAA 8785 |||| ||||||| |||||||||||||| || | ||||||||||| ||||| || | Sbjct 11221 CCATTAGGTATCAGTGGTTCCATGCTATCCCCTCTCGCCGGAAAACACAGCACTCCGGTG 11162 Query 8786 CCATCACTGTTAGCTCCGACACGGCGCAAGGTTGCTTTTGAGAAGCGTAATTTAAAACCA 8845 |||||| |||| ||||| || | | || || ||||| || || | || ||||| || Sbjct 11161 CCATCAGTGTTGGCTCCTACTCTCCTAAAAGTGGCTTTGGAAAATCTCAACTTAAAGCCG 11102 Query 8846 TTATGATCTTCG-CAATGAACTCTTCCGTCACCGCATGCAAACTCAATGTCTTTCAGATA 8904 || | || || ||||| ||| | || ||| || |||||||| || ||||||| | | Sbjct 11101 TTGTAGTCCACGTCAATGCACT-TACCACTACCACAAGCAAACTCTATATCTTTCAAAAA 11043 Query 8905 TGGCACCTCAACTTCATCATCTCGTAGTGGTGTATTTCTGTCCCA 8949 ||| ||||| |||||||||||| || ||||| || || ||||| Sbjct 11042 TGGAACCTCTACTTCATCATCTTCTAAAGGTGTTTTGCTATCCCA 10998 Score = 120 bits (132), Expect = 1e-22 Identities = 200/284 (70%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 18387 ATGGCAAACCTACGCAAAGAAGCGCGTGGCAGAGAATGCCAGGTACGGATTTATGGCGTA 18446 |||||||| ||||||||||||||||| || ||||||| ||||| | || ||| | Sbjct 3918 ATGGCAAATCTACGCAAAGAAGCGCGGGGTCGAGAATGTCAGGTCAGAATACCGGGCATC 3859 Query 18447 TGCAATGGCAATCCTGAAACTACAGTTTTGGCGCATTACCGAATGGCTGGAATTTGCGGA 18506 || || || || ||||| |||| |||| |||||||| |||||||| ||||| || Sbjct 3858 TGTAACGGTAACAGCGAAACGGTAGTTCTGGCTCATTACCGGATGGCTGGCATTTGTGGC 3799 Query 18507 ACGGGAATGAAGCCAGATGACCTGTTGGCTGCATGGGCCTG-TAGTGACTGCCATAATGA 18565 | ||| ||||| || |||| ||||| | |||||||| || | ||| || || |||| Sbjct 3798 ATGGGGATGAAACCCAATGATCTGTTTGGGGCATGGGCGTGTTCGTG-TTGTCACGATGA 3740 Query 18566 AATCGATCGCCGTACTCGCATTCTCGACAACAACGACGCCAGACTTTAC-CACCTGGAAG 18624 ||| || ||| | || | | || | | || | | || || | | ||| | || | Sbjct 3739 AATAGACCGCAGAACGAGGCTGACAGAGACCGACTATG-CACACATGGCTCACTTAGAGG 3681 Query 18625 GCGTGATCAGGACGCAGGCGATACTGCTGAAGGAGGGGAAAATT 18668 | || ||||||||||| | ||| |||| |||||| || ||| Sbjct 3680 GTGTAATCAGGACGCAATCAATATTGCTATCGGAGGGTAAGATT 3637 >seq10737 Length=14001 Score = 95.1 bits (104), Expect = 5e-15 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 17228 GAATTTAAGCACAGCATGTCTTTAAG-ACCTTCTGTGAAAATCGCCCGTAACGTTCGCTC 17286 ||||||||||||| | || ||| | ||| ||| ||||| || | || || ||| Sbjct 4626 GAATTTAAGCACAAGGTTACTCAAAGTAACTT-TGTTAAAATTGCTCAAAATGTGCGCCA 4684 Query 17287 CCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCACGCAAAAATGCTCGAAACTGATCA 17346 | | | | | |||||||| |||||||||||||| ||||| || ||| | || ||||| | Sbjct 4685 CTTAACCTTATGGACAGAGCGCGGAGCAGCCCGCCACGCTAAGATGTTGGATACTGACAA 4744 Query 17347 GGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTATTTCAGCCAG 17392 |||||||| || ||||| || |||| || | ||||||| |||| Sbjct 4745 AGCATGGGATGTCTTCGAGAAGTTGGAGGATTTTTATTTCAACCAG 4790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200477171817520