Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6327 116 4e-21 seq12388 96.9 3e-15 seq13049 95.1 1e-14 seq7750 82.4 7e-11 >seq6327 Length=14581 Score = 116 bits (128), Expect = 4e-21 Identities = 317/475 (67%), Gaps = 19/475 (4%) Strand=Plus/Minus Query 147166 GCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTT 147225 || |||||| || |||||| || || |||| ||| |||||||| |||| ||||| Sbjct 7286 GCTAATTCAGAGGATGCCTCAAGAGCACCATGGTAAATGGTTTCAAAGATTCTCTTGTTG 7227 Query 147226 AGGACGGTCGCTTCTTCGCTCTCGT-AAGGCATAC-GCAGAAGCACAAAGGCATCGGCCA 147283 || | |||| | || || || | |||| ||| | || || ||||| || | Sbjct 7226 AGATCACGAGCTTGA--GGACTAGTGAACGGATACCGCATCAACATGAAAGCATCTGCTA 7169 Query 147284 AACCCTGGATACCGACGCCGATAGGTCGATG---CTT-TTCGTTGCTGC-GCTTCGCGCT 147338 |||| || | |||| || || || ||||| ||| || | || | | |||||| | Sbjct 7168 AACCTTGAACTCCGATTCCAATTGGGCGATGACGCTTGTTTGATGTTTCAGCTTCGGGAA 7109 Query 147339 CGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGT 147398 | |||||| |||| || ||||| ||||| |||||||| ||||| || || Sbjct 7108 CC-----GGATAGAAATTGCAGTCGATAATTTTGTTAAGGTTACGTGTGACAACCTTGGT 7054 Query 147399 TATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCAC 147458 |||| | || || ||| ||||| |||| |||||| ||| || |||||| Sbjct 7053 AATTGCATGAAGCTTTTCGTAATCAAAAGTTTTGTCTTCTTTG---ACGAATCGGTTCAG 6997 Query 147459 GGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTT 147517 || || || || | |||||| || || || || || | || |||||||||||||| Sbjct 6996 AGCAATCGAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGA-GTACTGCACGATTT 6938 Query 147518 CGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGC 147577 | | || || ||| || || || ||| | ||||| |||||| || | ||||| Sbjct 6937 CCGTACAGAGATTGGAACACTTAATAGTTCCAAGATTTTTCTGATTCGACTTTCTATTGC 6878 Query 147578 ACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT 147632 | || |||||| | |||||||||||| || || || | ||||| | |||||| Sbjct 6877 AAGCATCTTTGTAAAGCATGTACGGTATACCAGTTTCAATTTGCGCTGTAACGAT 6823 Score = 114 bits (126), Expect = 1e-20 Identities = 200/288 (69%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 147346 GGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTT 147405 ||||||| |||| |||||||||||||| |||||||| | ||| || || || | Sbjct 6617 GGATAGTAATTGCAGTCAATAATCTTGTTAAGGTTACGTGTGATAACCTTGGTAATCGCA 6558 Query 147406 TTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATA 147465 | || || ||| ||||| | || |||||| |||||| |||||| || || Sbjct 6557 TGAAGCTTTTCGTAATCAAAGGTTTTGTCTTCTTTG---ACGCATCGGTTCAGAGCAATC 6501 Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCA 147524 || || | |||||| || || || || || | || ||||||||||||||| | ||| Sbjct 6500 GAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGA-GTACTGCACGATTTCAGTGCA 6442 Query 147525 CAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTC 147584 || ||| ||||| || ||| | ||||| ||| || || | |||||| || || Sbjct 6441 GAGATTGGAACATTTAATAGTTCCAAGATTTTTCTGGTTCGACTTTCTATTGCAAGCATC 6382 Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT 147632 |||| |||||||||| ||| || || || | ||||| | |||||| Sbjct 6381 TTTGTAGAGCATGTAAGGTGTACCAGTTTCAATTTGCGATGTAACGAT 6334 >seq12388 Length=21549 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | ||||||| || ||||| |||||||| | ||| || |||||| Sbjct 15490 AACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTC 15431 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || |||| |||| ||||| || || |||||||| || ||||| || || Sbjct 15430 AAGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTG 15371 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | ||| | | |||| | | || ||||| | || | |||||| Sbjct 15370 GATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTT 15311 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||| || || |||| || ||||||||| Sbjct 15310 ACCAGTGAGGGTCTTTACAAAGATCTGCATG 15280 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || || || ||||| ||||| || || ||| || |||||| Sbjct 15999 AACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTC 15940 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || |||| |||| |||||||||||||| ||||| || || || || || Sbjct 15939 AAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTG 15880 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | || | | || | | || ||||||| || | |||||| Sbjct 15879 GATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGTTTT 15820 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||||| || || | ||||| |||||| Sbjct 15819 ACCAGTCAACGTCTTGACAAAAATTTGCATG 15789 >seq13049 Length=11502 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| |||||||||||| || ||| || ||||| || ||||| || | | Sbjct 10047 GATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCA 9988 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || || |||||||| | |||||||| || ||||| ||| | Sbjct 9987 AAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCCTGGATTTTAGCTTTGACG 9928 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | || | | || ||||||| || | |||||||||||| || || || Sbjct 9927 TTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTC 9868 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 9867 ACGAAGATCTGCATG 9853 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||| || | ||| || |||||| || ||||| || | Sbjct 7389 TTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGTTGTTTGCCAG 7330 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| ||||| || || |||||||| ||||| ||||| || ||||| || | Sbjct 7329 CAAAGATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATTTTGGCCTTGA 7270 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | | || | | || ||||||| || | |||||||||||| || || | Sbjct 7269 CGTTTTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCT 7210 Query 132108 TTATGAAAATCTGCATG 132124 | | ||| ||||||||| Sbjct 7209 TCACGAAGATCTGCATG 7193 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| ||||||||||| || ||| || ||| || || ||||| |||| Sbjct 10503 GATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCG 10444 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | ||||||||||| ||||| || || ||||| || ||| || ||| | Sbjct 10443 AAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTCCTGAATCTTGGCTTTGACG 10384 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | || | | || ||||||| || | |||||||||||| || || || Sbjct 10383 TTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTC 10324 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 10323 ACGAAGATCTGCATG 10309 >seq7750 Length=8304 Score = 82.4 bits (90), Expect = 7e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||||||||||||||||||||||||| | ||||| ||||| ||||| || |||| Sbjct 2741 TTGACTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGG 2800 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| | ||||||||| ||||| || || ||||| || || Sbjct 2801 CGAAGATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTC 2843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476526291714720