Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_026593.1 Length=59419 Score E Sequences producing significant alignments: (Bits) Value seq10339 154 6e-33 >seq10339 Length=11660 Score = 154 bits (170), Expect = 6e-33 Identities = 504/772 (65%), Gaps = 26/772 (3%) Strand=Plus/Plus Query 45058 GCTGATCGGCAAACCGGTGATGCTTGGGCAGGGCATG-AACCTGCAGCAGGCCCACGTCT 45116 ||||| | |||| || ||| |||| |||||| | || |||||||||| | | || || Sbjct 6110 GCTGAGCAGCAAGCCCGTGCTGCT-GGGCAGCGGCTGCAACCTGCAGCGGCACTGCGCCT 6168 Query 45117 GTG---TCTACATCGGCATCACGCACAAGTTCAACGACCTGATCCAGAGCTTGCACCGGA 45173 | | ||||| | |||||| ||||||| |||| | |||||| ||||||| Sbjct 6169 GGGCGATCTACCTGGGCATCGGCTTCAAGTTCGCCGACTTCATCCAGTCGGTGCACCGCC 6228 Query 45174 TTCAGCGGTTCGGCCAAACCCACCCC-TGTACAGCCCATTTGATCCATTCCGAGACCGAA 45232 | ||||| ||| || || | || || || | | ||||| | ||||| |||| Sbjct 6229 TCCAGCGCTTCCTGCAGACGCGCCAGGTGCGCATCG-ACCTGATCTACACCGAGGCCGAG 6287 Query 45233 CGGGAAGTGGTTCGCATCATC---CGCGAGAAATGGGCCCAGCACAGAGAGCTGACATCA 45289 || || ||| || | | | ||| |||||||||||||||| |||| || Sbjct 6288 CGCGAGGTGCGCCGGACCCTGGAACGC---AAATGGGCCCAGCACAAGGAGCAAGTGGCA 6344 Query 45290 ACTATGACTGACATAATCCACGAATACGGGCTTGACCC-CGAGGCAATCTCGGAAGCGCT 45348 ||||| || || ||| | |||| |||| ||| | | || ||| || | |||| Sbjct 6345 CGCATGACGGAAATCATCAAGGAATTCGGG-TTGTCGCACGCGGCCATGATCCAGACGCT 6403 Query 45349 GCAACGGTCCATCGGATGCGAACGAATCGAAGCATCCGGTGAGGGCTGGC-------TGT 45401 | || |||| || || || |||| | || |||| ||| || Sbjct 6404 GAGCCGCGCCATGGGCGTGGAGCGCGTCGAGGTGCGCGCGCCGGGC-GGCGAGTACGTGC 6462 Query 45402 TCGCCAACAACGACTGCGTACCCGAAACCGAGAGAATGGCAGACGATTCGGTGGATCTGA 45461 | | ||||||||||||||| ||| || | ||||| ||| |||| ||| Sbjct 6463 TGGTCAACAACGACTGCGTGAACGAGACGCGCCGCATGGCCAGCGACAGCGTGGGCCTGG 6522 Query 45462 TTGTCACCAGTATTCCGTTCTCCAACCACTACGAATACACGCCGAGCTACAACGACTTCG 45521 | | ||||| || || ||| || || ||||| ||| |||| | || | |||||||| Sbjct 6523 TGCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCCAACTTCGCCGACTTCG 6582 Query 45522 GCCACACCGACGACAACGCCCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGC 45581 ||||||||||| |||||| || |||| ||||||||||| ||| |||| | |||| Sbjct 6583 GCCACACCGACAGCAACGCGCACTTCTTCCAGCAGATGGACTTCCTGGTGCCGGAGCTGC 6642 Query 45582 TGCGCATCCTCGCGCCGGGCCGTATCTACGCCTGCCACGTCAAGGACCGCATCTTG---T 45638 ||||| | || ||||||| | | |||| |||||||||| |||||||| || Sbjct 6643 TGCGCGTGCTGATGCCGGGCAGGGTGGCCGCCATCCACGTCAAGAACCGCATCGTGCCCA 6702 Query 45639 TCGGAAACGTCACCGGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCT 45698 ||| | || |||| ||| | | |||| | ||| ||| ||| || | ||| Sbjct 6703 GCGGCATGGTGGAGGGCGTCGGCTTCCAGACCGAGTACCCCTTCGACGTGGACACCATCG 6762 Query 45699 TTCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGG 45758 | |||| ||||||| ||| | | ||| | ||| | |||||||| |||| Sbjct 6763 CCTGCTTCCGCCGGGCCGGCTTCCACTTCGTGGGCCGCAAGACCATCGTCACCGACGTGG 6822 Query 45759 TGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGA 45810 |||| || ||||||||||| ||||| ||||||| ||||| ||||| || Sbjct 6823 TGCGCGAGAACAACCAGACCTACCGCCTGGGCTACAGCGAGCAATGCAAGGA 6874 Score = 122 bits (134), Expect = 3e-23 Identities = 231/331 (70%), Gaps = 12/331 (4%) Strand=Plus/Plus Query 44042 GACGTTCACCCGATGCTGCTGCCACACCAGCGTGACCTGGTGCGCTGGGCGGTC-GCCGG 44100 ||||| ||||| ||||| ||| |||||| | |||| |||||| || ||| | Sbjct 5067 GACGTCAACCCGCTGCTGAAGCCGCACCAGATCGCTGCGGTGATCTGGGCCATCCGCCTG 5126 Query 44101 GGGGCGGCG-GGCGATCTTCGCGGCGTTCGGATTGGGCAAGACCGTGATGCAGCTGGAGA 44159 || | ||| |||| | ||| ||| ||||| ||||||||||| | ||||| |||||| Sbjct 5127 GG--CTGCGCGGCGCTGTTCATGGCCTTCGGCCTGGGCAAGACCTTCGTGCAGTTGGAGA 5184 Query 44160 TCGTGCG-ATTGTCGCTAGCCAAGCATGGCGGTGGTAAAGGTCTGATCGTGATGCCGCTG 44218 ||||||| || || || ||| |||| ||| || | || |||||||| || |||||| Sbjct 5185 TCGTGCGCATCGT-GCGTGCCC-GCAT--CGGCGGCATGGGCCTGATCGTCATCCCGCTG 5240 Query 44219 GGGGTGCGGATCGAGTTCGCCCACGACGCCCAAATGCTAGGCATCGAAACCCGGTTCGTT 44278 || ||||| |||||| || |||||| | || |||||| | |||| | Sbjct 5241 GGCGTGCGTCAGGAGTTCATCCGCGACGCGGCACGCCTTGGCATCACGGTCAAGTTCATC 5300 Query 44279 CGCCGTACAGACGAAGTCGGTGGTG---ACGGAATCTATCTCACCAACTATGAGAGTGTC 44335 ||||| | || |||| || | |||| ||||| ||||||||||| || | || Sbjct 5301 CGCCGCATCGAGGAAGCCGACGACCCGAACGGCATCTACCTCACCAACTACGAAACGATC 5360 Query 44336 CGCGACGGAAAGTTGGACCCGACACTGTTCA 44366 |||||| | ||| |||||||| ||||||| Sbjct 5361 CGCGACCGCAAGCTGGACCCGCTGCTGTTCA 5391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189987040675544