Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_026597.1 Length=63334 Score E Sequences producing significant alignments: (Bits) Value seq10339 273 9e-69 >seq10339 Length=11660 Score = 273 bits (302), Expect = 9e-69 Identities = 1569/2472 (63%), Gaps = 172/2472 (7%) Strand=Plus/Plus Query 45846 CCCATGGCCATC-AGGTTGACCCGGGCGAGATTCACTCGATGTTGTTGCCGCACCAGCGC 45904 |||| || | || |||| |||| || ||| | || || || || |||||||||| | Sbjct 5040 CCCAAGGGCTTCGAGGTCGACCAGGCCGACGTCAACCCGCTGCTGAAGCCGCACCAGATC 5099 Query 45905 GATCTGGTGCGTTGGGCGGTC-GCCGGGGGTAGGCGCGCGATCTTCGCGGCGTTCGGCCT 45963 | | |||| ||||| || ||| ||| | ||| ||| | ||| ||| |||||||| Sbjct 5100 GCTGCGGTGATCTGGGCCATCCGCCTGGGCTGCGCG-GCGCTGTTCATGGCCTTCGGCCT 5158 Query 45964 GGGCAAGACGGTGATGCAGCTGGAGATCGTGCGCCTGTCGCTAGCCAAGCA-CGGCGGTG 46022 ||||||||| | ||||| |||||||||||||| | || ||| ||| |||||| Sbjct 5159 GGGCAAGACCTTCGTGCAGTTGGAGATCGTGCGCATCGTGCGTGCC-CGCATCGGCGGCA 5217 Query 46023 GGCGAGGCTTGATCGTGATGCCGCTGGGCGTGCGGATCGAGTTCGCCCACGACGCCAACA 46082 | ||| ||||||| || |||||||||||||| |||||| || ||||| | || Sbjct 5218 TG---GGCCTGATCGTCATCCCGCTGGGCGTGCGTCAGGAGTTCATCCGCGACG-CGGCA 5273 Query 46083 TG-CTGGGCATCGAAACCCGGTTCGTTCGCCGCACAGAAGAAGTCGGCGGC---GATGGT 46138 | || |||||| | |||| | ||||||| || |||| || || | | || Sbjct 5274 CGCCTTGGCATCACGGTCAAGTTCATCCGCCGCATCGAGGAAGCCGACGACCCGAACGGC 5333 Query 46139 ATCTACCTCACCAACTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTTACG 46198 |||||||||||||||||||| | | ||||| | ||||| |||||| ||||| | Sbjct 5334 ATCTACCTCACCAACTACGAAACGATCCGCGACCGCAAGCTGGACCCGCTGCTGTTCAGC 5393 Query 46199 GCCGTCTCACTCGACGAGGCGAGCGTG-CTGCGCTCGTTCGG-GTC--CAAGACCTACCA 46254 | | | || ||||||||| || || |||||| ||||| | | |||||||| || Sbjct 5394 GTGGCCAGCCTGGACGAGGCG-GCATGCCTGCGCGGCTTCGGCGGCAGCAAGACCTTCCG 5452 Query 46255 GTCGTTCCTAGAGCTGTTCGAC-GCG---------------------------------- 46279 |||| | | |||||||| | ||| Sbjct 5453 CGAGTTCATGGCGCTGTTCGCCGGCGACGACCGGCGCGACATGGCCAACCGCGTGAAGAG 5512 Query 46280 -------GTGCCCTACCGGTACGTCGCCACCGCCACACCCTCGCCGAACCGGTACAAGGA 46332 ||||| || || | ||| ||||| ||||| ||| || ||| || || Sbjct 5513 CGCTGGCGTGCCGTATCGCTTCGTGGCCACGGCCACGCCCAGTCCAAACGAGTTTGTCGA 5572 Query 46333 GCTGATCCACTACGCGGGCTATCTCGGGGTAATGGACACCGGTGCGGCGCTCACGCGTTG 46392 |||| | |||| | || || || || |||||| || ||| ||||||| Sbjct 5573 GCTGCTGGCCTACAGCGCCTTCCTGGGCGTGATGGACGTTGGCCAGGCCAAGACGCGTTT 5632 Query 46393 GTTCCAGCGGGAC-TCGACCAAGGCGAACAACCTCACCCTGTACCCCCACAAG-GAGCGC 46450 ||| |||| || ||| ||||| ||||||| || ||| | ||| | | |||||| Sbjct 5633 CTTCAAGCGCAACAGCGA-GAAGGCCGACAACCTGACGCTG-AGCCCAGCGCGCGAGCGC 5690 Query 46451 GAGTTCTTCTTGTGGCTCAACACCTGGGCCGCGTTCGTGCAATCCCCGGCAGACCTCGGT 46510 || |||| ||||| | | ||||||| ||||||||| || | |||||||| Sbjct 5691 GACTTCTGGCTGTGGGTGGCAAGCTGGGCCCTGTTCGTGCAGAAGCCCTCGGACCTCGGC 5750 Query 46511 CACGACGCCACCGGCTATGACCTGCCGCCGCTGGAGGTGCTGTGGCATGAGGTTGATCCG 46570 || || | |||||| || |||||||| | || | | ||||| || |||| Sbjct 5751 TACAGCGACGACGGCTACGAGCTGCCGCCCATCGACATCCGCTGGCACGA----GATC-- 5804 Query 46571 CCGGCTGACGACTTCGA------TTTCGAGCGTGACGGGCAGGGCCAGTTGGT---GCGC 46621 ||||| ||| || ||| | | | ||||| |||| ||| || | |||| Sbjct 5805 CCGGCGGACCACGCCGACGCTGGTACCAATATGGACGGCCAGGCGCAGATGTTCAAGCGC 5864 Query 46622 GGGGTGAACCTCGGGTTACCGCAGGCCGCGGCCGAAAAGCGCCGGTCGCTGGATGCTCGG 46681 || | |||| | | | || ||| ||| |||||| |||||||| || Sbjct 5865 CAGG---CCATCGGCGTGGTGGACGCGGCGCGCGAGAAGCGCGACAGCCTGGATGCGCGC 5921 Query 46682 CTGTCCAAGCTGACCGAGAT---CGTCACCGACCACGCCGCGCACGGTGAGGGCCAGATT 46738 || ||||| ||| ||| | || | |||| ||||| ||| | | Sbjct 5922 GTGGCCAAGATGATGGAGCTGCGCGCCGAGGACCCGGCCGCCCACCG------------T 5969 Query 46739 GTGATCTGGTGCGACCTCAACGACGAGCAGCGCGCCATCGAGAAGGCCCTCGAGGACGCT 46798 ||||||||| |||||| | || |||| |||||||||||| ||| || |||| Sbjct 5970 GTGATCTGGCACGACCTGGAGGATGAGCGCCGCGCCATCGAGCGCGCCATC-CCGACG-- 6026 Query 46799 GGGTTGAGCTTCTCATCGGTGTACGGGTCACTCGACCCGGA---CGAGGTGGAGCGCCGC 46855 || | || | || ||||| | | |||||||| |||| |||| || Sbjct 6027 -------GCCGC-CAGC-GTCTACGGCACCCAGGACCCGGAGACCGAGCGCGAGCCCCTG 6077 Query 46856 CTGTCCGACTGGAAGAACCGCGACACCTACGCGCTGATCGGCAAACCGGTGATGCTCGGG 46915 || | || | | || | | | | ||||| | |||| || ||| |||| ||| Sbjct 6078 GTGGTGGCCTTCAGCGATGGCCTGATCCAGGAGCTGAGCAGCAAGCCCGTGCTGCT-GGG 6136 Query 46916 CAG-GGCATGAACCTGCAGCAGGCCCACGTCTGTG---TCTACATCGGCGTCACGCACAA 46971 ||| ||| |||||||||| | | || ||| | ||||| | ||| || ||| Sbjct 6137 CAGCGGCTGCAACCTGCAGCGGCACTGCGCCTGGGCGATCTACCTGGGCATCGGCTTCAA 6196 Query 46972 GTTCAACGACCTGATCCAGAGCTTGCACCGGATCCAGCGGTTCGGCCAAACCCACC-CTT 47030 |||| |||| | |||||| ||||||| ||||||| ||| || || | || | Sbjct 6197 GTTCGCCGACTTCATCCAGTCGGTGCACCGCCTCCAGCGCTTCCTGCAGACGCGCCAGGT 6256 Query 47031 GCACAGCCCATTTGATCCACTCCGAAACCGAACGGGAAGTGGTGCGGGTCGTCCGCGA-- 47088 || || | | ||||| || |||| |||| || || || | || || | || || Sbjct 6257 GCGCA-TCGACCTGATCTACACCGAGGCCGAGCGCGAGGT-GCGCCGGAC--CCTGGAAC 6312 Query 47089 -GAAATGGGCGCAACACCGGGAG---TTGACATCAACG-ATGACCGACATCATCTACGAG 47143 |||||||| || ||| |||| || | ||| ||||| || |||||| | || Sbjct 6313 GCAAATGGGCCCAGCACAAGGAGCAAGTGGC----ACGCATGACGGAAATCATCAAGGAA 6368 Query 47144 TATGGGCTTGAC-CCCGAGGCAAT--TTCGGAAGCGCTGCAACGCTCCATCGG-GTGCGA 47199 | | || ||| | | || ||| || | | || ||||| ||| |||| || ||| || Sbjct 6369 T-TCGGGTTGTCGCACGCGGCCATGATCCAGA--CGCTGAGCCGCGCCATGGGCGTG-GA 6424 Query 47200 ACGCATCGAAGCATCCG-GCGAGGGGTGGC-------TGTTCGCCAACAACGACTGCGTG 47251 ||| |||| | | || ||| ||| ||| || | | |||||||||||||||| Sbjct 6425 GCGCGTCGAGG--TGCGCGCGCCGGGCGGCGAGTACGTGCTGGTCAACAACGACTGCGTG 6482 Query 47252 CCCGAAACCGAGTCG-ATGG---GCGACAGCTCGGTAGATCTGATTGTCACCAGCATTCC 47307 ||| | || | || |||| |||||||| || | ||| | | |||||||| || Sbjct 6483 AACGAGA-CGCGCCGCATGGCCAGCGACAGC---GTGGGCCTGGTGCTGACCAGCATCCC 6538 Query 47308 GTTCTCAAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGACAA 47367 ||| | || ||||||||| |||| | || | ||||||||||||||||||| ||| Sbjct 6539 CTTCAGCACGCAGTACGAGTACTCGCCCAACTTCGCCGACTTCGGCCACACCGACAGCAA 6598 Query 47368 CGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCGCC 47427 |||||| |||| ||||||||||| ||| |||| | ||||||||| | || ||| Sbjct 6599 CGCGCACTTCTTCCAGCAGATGGACTTCCTGGTGCCGGAGCTGCTGCGCGTGCTGATGCC 6658 Query 47428 CGGGCGGATCTACGCCTGCCACGTCAAGGACCGCATCTTG---TTCGGAAACGTCACCGG 47484 || || | |||| |||||||||| |||||||| || ||| | || || Sbjct 6659 GGGCAGGGTGGCCGCCATCCACGTCAAGAACCGCATCGTGCCCAGCGGCATGGTGGAGGG 6718 Query 47485 CGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTTCACGGCCGCAAACA 47544 || ||| | | |||| | ||| ||| ||| || | ||| | |||| Sbjct 6719 CGTCGGCTTCCAGACCGAGTACCCCTTCGACGTGGACACCATCGCCTGCTTCCGCCGGGC 6778 Query 47545 CGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAACAACCA 47604 ||||||| ||| | | ||| | ||| | |||||||| |||||||| || |||||||| Sbjct 6779 CGGCTTCCACTTCGTGGGCCGCAAGACCATCGTCACCGACGTGGTGCGCGAGAACAACCA 6838 Query 47605 GACGTACCGGCTGGGCTGGTCGGAGCAGTGCAAAGACGCCACCAAGATGGGCGTTGGCTC 47664 ||| ||||| ||||||| ||||| ||||| || | | | |||||| | ||| Sbjct 6839 GACCTACCGCCTGGGCTACAGCGAGCAATGCAAGGATGGCTCGCGCATGGGCTTCGGCAT 6898 Query 47665 CCCGGAATACGTTCTGCTGTTCCACAAACCGCAGACAGACAGGTCGAAG-GGATACGCCG 47723 || ||| | ||| | |||| ||| | | ||| ||| | | | || || |||| Sbjct 6899 GTGCGAGTACCTGCTGATCTTCCGCAAGGCACCGACCGAC-GCCAGCCGCGGCTATGCCG 6957 Query 47724 ACACCCCCGTCACCAAATCCAAGGACGACTACAGCCGTGCCCGATGGCAGGTGGACGCGC 47783 || ||||| || ||| ||| ||| || | || |||||| | ||||| | Sbjct 6958 ACGTGCCCGTGGTGAAGGACAAAACCGAGTACTCGCGGCCGCGCTGGCAGTTCGACGCCC 7017 Query 47784 ACGCGTTCTGGCGCTCGAGCGGCAACAGGTCACTGACAGCCGACGAGCTCGCCGCGNNNN 47843 ||| | | |||| | ||| || || ||||| | || ||||| | | Sbjct 7018 ACGGCTACGCGCGCAGCAAGGGCGACCGGCTGCTGACGCCAGAGGAGCTGGAAGGCCTCA 7077 Query 47844 NNNNNNNNNNNNNNNNNNNNNNNTTCACCAAGCACAGCCTGCAGGACGTCTACGACTACC 47903 ||| ||||||| ||| || ||||||||||| | Sbjct 7078 CCCATGCCGACATCTTCAAGCTGTTCCGCAAGCACTCGCTGGAGCGCGTCTACGACTTCG 7137 Query 47904 AGTCAC-ACGTCCGCATCGGTGAGCAGCTCGAAGGTCGCGGGGCCCTGCCTGCCACGTTC 47962 || ||| |||| |||||||| ||| ||| | | ||||| ||||| |||| ||| Sbjct 7138 AG-CACGACGTGCGCATCGGCGAGGCGCTGGCCGAGCGCGGCATGCTGCCCACCACCTTC 7196 Query 47963 ATG--GCCATCGCCCCGGGATCGTGGTCGCCTCACGTGTGGCACGACGTGAACCGGATGA 48020 ||| || ||| | || | ||| || |||| ||| |||||||| || ||| Sbjct 7197 ATGCTGCTGCAGCCGC-AGAGC-TGGCATCCGGACGTCTGGACCGACGTGACGCGCATGC 7254 Query 48021 TCACCTTGAACGGGGAGCAGAAACGCCGCAACGTTC-AAATGCACGTGTGCCCCTTGCAG 48079 ||| | ||| | | |||| || || | | | |||||| ||||||| ||||| Sbjct 7255 GCACGCTCAACAGCGCGCAG-TCGGCAGCCGGGCGCGAGATGCACCTGTGCCCGATGCAG 7313 Query 48080 TTCGACATCGTTGACCGGCTGATAACCCGGTTCTCGAATCCTGGCGAGTTGGTGTTCGAC 48139 |||||||| | |||||| ||| |||| || ||| | |||||| ||| | |||| Sbjct 7314 TTCGACATTGCGGACCGGGCGATCACCCAGTACTCCATGAAGGGCGAGGAGGTCTACGAC 7373 Query 48140 CCGTTCGGCGGGCTGGGCACCGTGCCGTTGCGGGCTCTGAAACTTGGTCGGCGCGGCCGT 48199 || |||||||| ||| || ||||| | |||||| || || || ||||||||||| Sbjct 7374 CCCTTCGGCGGCCTGATGACGGTGCCCTACCGGGCTGTGCTGCTGGGCCGGCGCGGCCGC 7433 Query 48200 GGTGTCGAGCTG 48211 || ||||||| Sbjct 7434 GGCTGCGAGCTG 7445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202508818866740