Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7750 132 5e-26 seq13049 123 3e-23 seq10049 122 9e-23 seq12388 105 7e-18 seq8226 86.0 6e-12 >seq7750 Length=8304 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | ||||| || || || || ||||| ||||||||||||||| Sbjct 764 TTTCCACCACGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG 823 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || || ||| || ||||| || || || || ||||| || |||||||| || Sbjct 824 GAGAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGA 883 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || |||||||| || || || || ||||| || | ||||||||||| ||| Sbjct 884 GGAATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCG 943 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || ||||| |||||||| ||||| | || || ||||| || |||||| Sbjct 944 ACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 994 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||||| || || || || ||||| || ||||||||||| Sbjct 993 TTCCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 1052 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||| | || |||||||| || || || || ||||| || |||||||| || | Sbjct 1053 AAAGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAG 1112 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||||| || | ||||||||||| ||| | Sbjct 1113 GAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGA 1172 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| |||||||| ||||| | || || ||||| || |||||| Sbjct 1173 CCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 1222 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| |||| || | || | ||||| ||||| ||||||||||| ||| Sbjct 1495 TTCCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGG 1554 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || || ||| ||||| || || || || || ||||| ||||||||||| |||| Sbjct 1555 AGAGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCG 1614 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||||| || | |||||||| | ||| | Sbjct 1615 GAATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGATGCTTCAA 1674 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || ||||| || || || ||||| | || |||||||| || |||||| Sbjct 1675 CTTCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCATT 1724 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || || |||||||||||||||||| | || | ||| || Sbjct 2728 ACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCA 2787 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || ||||||||||| || || || || || ||||| || || || Sbjct 2788 AGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGG 2847 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | |||||| || | ||| || ||||| |||||||| || Sbjct 2848 ATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATGGTCTTT 2907 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || || || |||||||| Sbjct 2908 CCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||||||||| ||||| || || || ||||| || |||||||| || Sbjct 3068 TTACCGGCAAAGATCAAACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTTG 3127 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | |||||||| | ||| || || ||||| ||||| ||||| || Sbjct 3128 GCCTTGACATTTTCGATAGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTACCAGTC 3187 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 | ||||| ||||| || |||||| Sbjct 3188 AGGGTTTTGACGAAGATCTGCATT 3211 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||| ||||||||||| || || || || || ||||| || ||||| || || Sbjct 2123 CCAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATCTTGGCC 2182 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || || ||||| ||||| || || || | | Sbjct 2183 TTAACGTTCTCGATGGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTTCCAGTAAGA 2242 Query 134694 GTTTTAACGAAAATTTGCATT 134714 || || ||||| ||||||||| Sbjct 2243 GTCTTCACGAAGATTTGCATT 2263 >seq13049 Length=11502 Score = 123 bits (136), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || ||||| ||||| |||||||||||| Sbjct 10080 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGAC 10021 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || || |||||||| ||||| || | ||| ||||| || || || Sbjct 10020 AAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGG 9961 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665 | |||||||| || || ||||| ||||| || ||||| |||| || | ||| || Sbjct 9960 GTTCCTTCTTTGTCCTGGATTTTAGCTTTGA-CGTTCTCAATGCTGTCTGAGGCTTCGAC 9902 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||| || |||||||| || | || || ||||| || ||||| ||| Sbjct 9901 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTTG 9850 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || ||||||||||| ||||||||||| Sbjct 10536 CCACCACGGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGAC 10477 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || || ||||| || || || ||||| ||||| |||||||| || Sbjct 10476 AGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGG 10417 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCAC 134665 || || ||||| || ||||| || ||||| || ||||| |||| || | ||| || Sbjct 10416 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGA-CGTTCTCAATGCTGTCTGAGGCTTCGAC 10358 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || |||||||| || | || || ||||| || ||||| Sbjct 10357 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 10310 >seq10049 Length=10599 Score = 122 bits (134), Expect = 9e-23 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| ||||| ||||||||| || || || ||| || Sbjct 9190 ACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCA 9249 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || || ||||| |||||||| || ||||| || ||||| || || || Sbjct 9250 AGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGG 9309 Query 134625 ATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || ||||| || |||| | || || | ||| || |||||||| |||||||| Sbjct 9310 ATCTTGGCCTTGACGTTCTC-AATGCTATCAGAGGCTTCGACTTCGAGAGTGATGGTTTT 9368 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||| || | || || ||||| || ||||| ||| Sbjct 9369 ACCAGTGAGGGTCTTCACGAAGATCTGCATGTTG 9402 >seq12388 Length=21549 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||| ||||| ||||| || | |||| | || || ||||| Sbjct 15993 GTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCGGCCATCTTCAAGCTG 15934 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | |||||| |||||||| || || || || || || || ||||| Sbjct 15933 CTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCCTGGATTTT 15874 Query 134630 TTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688 |||||| || |||| |||| || | ||| || ||||| || || |||||||| | Sbjct 15873 GGCTTTGACGTTCTC-AATGCTGTCTGAGGCTTCGACTTCGAGGGTGATCGTTTTACCAG 15815 Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || ||||||||||| Sbjct 15814 TCAACGTCTTGACAAAAATTTGCAT 15790 >seq8226 Length=1064 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 134534 GTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTG 134593 |||||||||| | |||| | ||| || || ||||| || || || ||||| ||||| Sbjct 605 GTTGTAGTCGGACAAGGTGCGGCCGTCCTCAAGTTGTTTTCCAGCGAAGATCAATCGCTG 664 Query 134594 CTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGT 134652 ||| || || || || ||||| || |||||||| || ||||| || |||| ||| Sbjct 665 CTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTTTC-AATGCTGT 723 Query 134653 CGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 | || | ||| || || | ||||| || || || || | || || || |||||||||| Sbjct 724 CTGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAAATTTGCA 783 Query 134713 T 134713 | Sbjct 784 T 784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505308363275040