Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6327 168 8e-37 >seq6327 Length=14581 Score = 168 bits (186), Expect = 8e-37 Identities = 466/710 (66%), Gaps = 27/710 (4%) Strand=Plus/Plus Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968 |||| || ||||||| ||| ||||||||||||||||| || || || |||| ||| Sbjct 6835 CAAATTGAAACTGGTATACCGTACATGCTTTACAAAGATGCTTGCAATAGAAAGTCGAAT 6894 Query 104969 CAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACA 105028 || || ||| | || || ||| |||||||||||||||| |||||| || | | | Sbjct 6895 CAGAAAAATCTTGGAACTATTAAGTGTTCCAATCTCTGTACGGAAATCGTGCAGTACTCG 6954 Query 105029 GACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 105088 ||||| ||||| || || | || || || ||||| | | || | Sbjct 6955 TCTCCTGATGAAGTCGCTGTTTGCAATTTAGCTTCGATTGCTCTGAACCGATTCGTCAA- 7013 Query 105089 CCAGA-GACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAA 105147 ||| |||||| || |||||||| ||||| || || | | |||| || |||||| Sbjct 7014 --AGAAGACAAA-ACTTTTGATTACGAAAAGCTTCATGCAATTACCAAGGTTGTCACACG 7070 Query 105148 AAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAA 105207 ||||| |||| | |||| || | ||||| || || ||| ||| | ||| || Sbjct 7071 TAACCTTAACAAAATTATCGACTGCAATTTCTATCCGGTTCCCGAAGCTGAAACATCAAA 7130 Query 105208 TATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG 105267 | | | || || |||||||| |||| ||||| ||| | || |||| ||||| | Sbjct 7131 CAAGCGTCATCGCCCAATTGGAATCGGAGTTCAAGGTTTAGCAGATGCTTTCATGTTGAT 7190 Query 105268 TCGCCACGCATTTGAT--TCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACC 105325 || | | || | ||| |||| || |||| | | || ||||| ||| Sbjct 7191 GCGGTATCCGTTCACTAGTCCTC--AAGCTCGTGATCTCAACAAGAGAATCTTTGAAACC 7248 Query 105326 ATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAA 105385 || || || | ||||||||||| || || || || ||| ||||| | ||||| Sbjct 7249 ATTTACCATGGTGCTCTTGAGGCATCCTCTGAATTAGCTGAGAAATATGGTACTTATGAG 7308 Query 105386 ACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG------GAA 105439 || | || || ||||| | ||||| | ||||||| ||| |||||| ||| Sbjct 7309 ACGTACGAAGGGTCTCCTGTAAGCCAAGGAATTCTTCAATATGAAATGTGGAATACAGAA 7368 Query 105440 GGTG-AGACCAAGCT-----------TCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 | || | | | || | ||| | | | |||| |||||| ||||| ||| Sbjct 7369 GATGGAAAGCCAGTTCTTCCTACAGATCAGTGCAATTGGGTAGCTCTGAAGGAGAAAATC 7428 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 | || | || | ||||||||||| || | || ||||||||||| |||||||| || Sbjct 7429 GCGAAGCATGGAGTGCGTAACAGTCTTCTTCTCGCCCCAATGCCAACGGCCTCCACAGCT 7488 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 |||||| | || || ||||||| |||| ||||||||| | |||||||| Sbjct 7489 CAAATCCTTGGAAACAATGAATCGATTGAGCCCTACACGTCCAACATCTA 7538 Score = 89.7 bits (98), Expect = 6e-13 Identities = 203/303 (67%), Gaps = 18/303 (6%) Strand=Plus/Plus Query 105314 ATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGAT 105373 |||||||| ||||| || || | ||||||||||| | || | || ||| || Sbjct 7766 ATATTTGAAACCATTTACCATGGTGCTCTTGAGGCATCCTGTGAACTAGCTGAGAAATAT 7825 Query 105374 GGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATG 105433 ||| | ||||| || | | || ||||||| ||||| | || |||| ||| ||| Sbjct 7826 GGTACTTATGAGACGTACCAAGGATCTCCAGTAAGCCAAGGAATTCTCCAATATGAAATG 7885 Query 105434 TGG------GAAGGTG-AGACCAAGCT-TCACTAC-GAC---------TGGGAAGCTCTC 105475 ||| |||| || | | | || | | |||| ||| |||| |||||| Sbjct 7886 TGGAATACAGAAGATGGAAAGCCAGTTGTTCCTACAGACCAGTGCAATTGGGTAGCTCTG 7945 Query 105476 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACA 105535 ||||| || | || | || | ||||||||||| || | || ||||||||||| Sbjct 7946 AAGGAGAAAATTGCGAAGCATGGAGTGCGTAACAGTCTTCTTCTCGCCCCAATGCCAACG 8005 Query 105536 GCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATC 105595 || ||||| || ||||| |||| || ||||||| | || ||||||||| | |||||| Sbjct 8006 GCTTCCACAGCTCAAATTCTGGGAAACAATGAATCGATCGAGCCCTACACGTCCAACATC 8065 Query 105596 TAT 105598 ||| Sbjct 8066 TAT 8068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583156892088480