Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_028770.1 Length=59878 Score E Sequences producing significant alignments: (Bits) Value seq2559 105 3e-18 >seq2559 Length=907 Score = 105 bits (116), Expect = 3e-18 Identities = 168/237 (71%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 5932 CGGCCCGCCGTTGAGGCAGATGAGAAGCTCGGCTTCCTGCCCGGCACTGTGGACGAGAAG 5991 || || || || ||||| | |||||||||||||||||||||||| ||| | ||||| Sbjct 853 CGCCCGGCAGTCGAGGCCGGCGAGAAGCTCGGCTTCCTGCCCGGCGACCTGGCCCAGAAG 794 Query 5992 ATGGCACCCTACCTCACCCCGATGCTGGACGCGGTGATCGACCTGGTCGGCC-CGACGA- 6049 || | || ||||| |||| || ||||| || ||| || ||||| ||| | Sbjct 793 ATCGACCCGTACCTGCGCCCGCTGTACGACGCCCTGTACGAGATGCTCGGCTTCGAACAC 734 Query 6050 -TGACGAAGCGCCTCCTCGAGTCGCGCCAGCTG---GAGGTCGCCCCGCTGGCCTACATG 6105 || | |||| | |||| |||||| || ||| |||||||||||||||||||| Sbjct 733 GTGGCCAAGC---TGATCGAA---CGCCAGGTGATCGAGATCGCCCCGCTGGCCTACATG 680 Query 6106 CGAGGCCGGACGTTCAACGACACGTACATCGTCGCTGACGAGATGCAGAACGCCACC 6162 || ||||| || | ||| ||| | |||| || ||||||| |||||| ||||| Sbjct 679 CGCGGCCGCACCCTGAACAACAGCTTCATCATCCTCGACGAGAGCCAGAACACCACC 623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191455592092160