Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq8898 114 4e-21 >seq8898 Length=990 Score = 114 bits (126), Expect = 4e-21 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 39040 TCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTC-ATC--GAAGTCGATGTCCACG 39096 |||| |||||| ||||||| | | ||||| ||| || |||||||| ||| | | Sbjct 480 TCGGCCACGTACTCGATCACGCGGTC---GCGACCGTCCATGCAGAAGTCGACGTCGAAG 424 Query 39097 TCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATG 39156 |||||||| ||||| || |||||||| ||||| || ||||| | || ||| | | Sbjct 423 TCGGGCATCGAGACCCGTTCAGGGTTGAGGAAACGTTCGAACAGCAGGTCGTAGGCCAGC 364 Query 39157 GGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGC 39216 ||||| |||||||||||| || |||| || |||||||||| || | || || || Sbjct 363 GGGTCGAGGTCGGTGATCTTCAGCACGTAGGCCACCAGCGAGCCGGCACCCGACCCCCGG 304 Query 39217 CCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCA 39251 || || || ||| ||||||||| | ||| ||||| Sbjct 303 CCCGGACCTACCGGCACGCCGTTGTTCTTGGCCCA 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159688169400264