Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq8898 109 2e-19 >seq8898 Length=990 Score = 109 bits (120), Expect = 2e-19 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 39473 TCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTC-ATC--GAAGTCGATGTCCACG 39529 |||| |||||| ||||||| | | ||||| ||| || |||||||| ||| | | Sbjct 480 TCGGCCACGTACTCGATCACGCGGTC---GCGACCGTCCATGCAGAAGTCGACGTCGAAG 424 Query 39530 TCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATG 39589 |||||||| ||||| || |||||||| ||||| || ||||| | || ||| | | Sbjct 423 TCGGGCATCGAGACCCGTTCAGGGTTGAGGAAACGTTCGAACAGCAGGTCGTAGGCCAGC 364 Query 39590 GGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGC 39649 ||||| |||||||||||| || |||| || |||||||||| || | || || || Sbjct 363 GGGTCGAGGTCGGTGATCTTCAGCACGTAGGCCACCAGCGAGCCGGCACCCGACCCCCGG 304 Query 39650 CCAGGGCCGACCCACACACCGTTCTCCTTCGCCCA 39684 || || || ||| ||| ||||| | ||| ||||| Sbjct 303 CCCGGACCTACCGGCACGCCGTTGTTCTTGGCCCA 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160212880581800