Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq4423 93.3 8e-15 >seq4423 Length=667 Score = 93.3 bits (102), Expect = 8e-15 Identities = 183/265 (69%), Gaps = 7/265 (3%) Strand=Plus/Minus Query 1712 ACCACCGGCGGCGCGAGTACGACACAT-CCGGCACTGTCGCCGGTGTGGGACGGGTCGTA 1770 |||| || || |||| ||| || ||| || || ||||||||| | | | |||||| || Sbjct 664 ACCATAGGGGGAGCGATTACCAC-CATGCCCGCGCTGTCGCCGTTTTCCGCCGGGTCATA 606 Query 1771 GCCAATCCAGACCGGGCGCGAGCCGAATGGATGGTCGGCGAACGGGGCGAAGTCCTC--- 1827 ||| | ||||||| |||| ||||| || | ||||||| || | ||||||| Sbjct 605 GCCCACCCAGACCTGGCGATCACCGAACGGCCGTGCGGCGAAGGGTTTGTAGTCCTCTGC 546 Query 1828 CCAT-GTTTCCATCACGTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAATACCGATG 1886 ||| | | ||| | ||| ||||||||| |||||| | | | | ||||| | | Sbjct 545 CCAGAGGTCCCAACT-GTCCACCATGCAGGGCTGCAACATCGCCAGGGGGAAGATGCTCG 487 Query 1887 CCTTATCGTCGACAAACTCGCACATAAACAGGTTCTTAAAGTCCTCATCACTGTTTTCGC 1946 || ||||||| |||| |||||| | |||||||| ||| |||| | || || Sbjct 486 CCCCGTCGTCGATGAACTGGCACATCAGCAGGTTCTGGAAGGCCTCGGCGTCGTACTCAA 427 Query 1947 GTCTGAGCTGGTCGAGGTCGAACAG 1971 | || |||| ||| ||||||||||| Sbjct 426 GCCTCAGCTCGTCCAGGTCGAACAG 402 Score = 84.2 bits (92), Expect = 4e-12 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 2102 CCCTTGTTGAACAGCTCGCCAGACCAGAAGGGGTAAGCGCCGTGCGCCAGCGTGGAAGGT 2161 ||||||||||| ||||||| | |||||||| ||| || |||| |||| | || || Sbjct 208 CCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCGTGTGCCATGCTCGATGGC 149 Query 2162 GTCGAAAAGTAAGTTGAGCGCAGATGCTTTTGCGAGGCCATGCCCGATGCGACTTTGCGC 2221 ||||| ||||| || ||| ||||| ||| |||||||| ||||| ||| Sbjct 148 GTCGAGAAGTAGGTCCGGCGGTACTGCTTCTGCATCGCCATGCCGCTGGCGACCTTGTTG 89 Query 2222 AGCTTCTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTC 2281 || | || || || | ||||||| | ||| |||| || | || ||||| || || | Sbjct 88 AGTTCCTTGAACTTGAAGGTCCAGAAGAATTCGTCGAAGTAGAAGTTGCCGTGATAGCCC 29 Query 2282 TGTGCGGTGTTGGAATTGGTGCCGAG 2307 || ||||| || ||||| || || Sbjct 28 TGGGCGGTCCGGGCGTTGGTCCCCAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95007917900680