Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_029099.1 Length=49797 Score E Sequences producing significant alignments: (Bits) Value seq4764 91.5 5e-14 >seq4764 Length=15780 Score = 91.5 bits (100), Expect = 5e-14 Identities = 199/293 (68%), Gaps = 15/293 (5%) Strand=Plus/Plus Query 22412 TGACTGATTTTGTTATGACTGGTAAGGCCAGCTTTAGCGACTTCGCAAGAAGCGTTATCG 22471 || |||||||| || | ||||||||||| | |||| | |||||| | | | | | | | Sbjct 14924 TGTCTGATTTTCTTCTCACTGGTAAGGCTAACTTTGGTGACTTCACCAAATCCATACTTG 14983 Query 22472 GTGACATTACCAACATGCTTATCAAGATGGCGCTGTTTAACTCGCTTTCTGCCGCGTTTG 22531 | || ||||| ||||| || | ||||| || | | | | || || |||| Sbjct 14984 GAATGATCACCAAAATGCTCATGCAAATGGCTATGCTGCAAGCCATGAAAGCGGCATTTG 15043 Query 22532 GTGGTGGCGGTACGTTCAGCTTCGCCAGCATGTTCAGCAAGGGATTTTCTGGCGGCGGTT 22591 ||||| || |||| |||| |||| | || |||||| |||| || |||| Sbjct 15044 GTGGT------AC-TTCA--TTCGG-AGCA-GCTCTT----GGATTTGCTGGAGGAGGTT 15088 Query 22592 ACACTGGCGACGGCGGGAAGTATGAGCCAAAAGGTGTTGTTCACGGCGGGGAATTCGTGT 22651 |||| || | || || || || ||||| |||||||| ||||| || || || ||||||| Sbjct 15089 ACACCGGAAATGGTGGCAAATACGAGCCTAAAGGTGTGGTTCATGGTGGTGAGTTCGTGT 15148 Query 22652 TCACGAAGGAGGCTACGCAAAGGTTAGGCCCGGAAAACCTATACCGACTAATG 22704 |||| || ||| | || || | ||||| || ||||| || || |||||| Sbjct 15149 TCACCAAAGAGTCAACTCAGCGTTTAGGTGTCGATAACCTCTATCGGCTAATG 15201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159201851719816