Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq4099 114 1e-20 >seq4099 Length=1469 Score = 114 bits (126), Expect = 1e-20 Identities = 293/444 (66%), Gaps = 44/444 (10%) Strand=Plus/Plus Query 125925 TATACCGCAATAGGTGCTTTAATAGCAGGGTGTGATTCATAATTTATCAATTCTAAATCT 125984 || || |||| ||| ||||| ||| || || ||||||||||| | |||||| || ||| Sbjct 672 TAAACTGCAACAGGGGCTTTTATATGAGCATGAGATTCATAATTCAGCAATTCGAAGTCT 731 Query 125985 TCATAATTAATATCAAAAATTGATTTA---TCTGTATTAATTTTTAATTGAGG---TGG- 126037 || | || | ||||||||| ||| |||| || || || | ||| || ||| Sbjct 732 TCGAATTTGAAATCAAAAATATCTTTCACCTCTGGGTTTATCTTCATTTGTGGCAATGGC 791 Query 126038 --TAGATAACTA-TCTCTTGATAATTGTGTATGTATTGCATCCATATGATTGGAATAAAT 126094 | ||| || || || || || || ||| || | |||||| ||| || Sbjct 792 TTTGGATCACGGCTCAACTG-TAGTTCCGTTTGT------TCAAAGTGATTGCTATAGAT 844 Query 126095 ATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAAC 126154 ||||||||| || |||||||| || |||||| | | || | |||| ||| ||| || Sbjct 845 ATGTGCATCGCCCAATGTATGGATAAATTCAGCGGCTTCCATATCACAGACTTGTGCCAC 904 Query 126155 AAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGC 126214 | |||| | |||||| ||||||||||||||||||||||||||||| || || Sbjct 905 CATCATCGTCAACAGCGCATAAGAGGCAATATTGAAAGGAACACCTAAAAATATGTCGGC 964 Query 126215 ACTTCTTTGATATAATTGACAATTTAATT---------TA----CCCTCT-----TG--- 126253 || | |||||| | ||||| ||||| || || ||| || Sbjct 965 GCTACGTTGATAAAGCTGACAGGATAATTGCGGCTTCATAATCCCCTTCTCAGGCTGTGC 1024 Query 126254 ------TACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTC 126307 ||| ||||||||||| | | || ||||| || || ||||| |||||||| Sbjct 1025 TGGTGCTACATAAAATTGAAAAAAAGCATGACAAGGGGGCAAGGCCATGTTTTCGATTTC 1084 Query 126308 AGTAGGATTCCATGCTGAAACAAT 126331 || | ||||||||| || ||||| Sbjct 1085 AGCAACATTCCATGCCGATACAAT 1108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408527427990164