Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6284 93.3 4e-14 >seq6284 Length=30006 Score = 93.3 bits (102), Expect = 4e-14 Identities = 78/93 (84%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 6678 CCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC-GACGTAGAAT 6736 |||| ||||| |||||||| || || ||||| || ||||| |||| ||| |||||||||| Sbjct 16506 CCATATCTCCTGATCGTTGGTAAAGTTGGCACGAGAGCTCACCAT-CGCAGACGTAGAAT 16564 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 ||||| | ||||||||| || ||||| |||||| Sbjct 16565 TGGCACATGGTGTGGCAAGGCGGGAGTGCCATC 16597 Score = 93.3 bits (102), Expect = 4e-14 Identities = 78/93 (84%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTC-GCGAATGGGGAGCTGT 34634 |||||| ||||| || ||||||||| | ||||||||||||||| ||| |||| ||||| | Sbjct 16597 GATGGCACTCCCGCCTTGCCACACCATGTGCCAATTCTACGTCTGCG-ATGGTGAGCTCT 16539 Query 34635 CCTGCCAGCTCTATCAACGATCGGGAGACATGG 34667 | ||||| || || |||||||| ||||| |||| Sbjct 16538 CGTGCCAACTTTACCAACGATCAGGAGATATGG 16506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448182542053440