Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq13049 95.1 9e-15 seq7750 89.7 4e-13 >seq13049 Length=11502 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || ||||| || || ||||| || || ||||| ||| || || | || |||||| | Sbjct 9851 AACATGCAGATCTTCGTGAAGACCCTCACTGGTAAAACGATCACTCTCGAAGTCGAAGCC 9910 Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | ||| || | || |||||| ||||| ||||||||||| || | Sbjct 9911 TCAGACAGCATTGAGAAC--GTCAAAGCTAAAATCCAGGACAAAGAAGGAACCCCTCCAG 9968 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | |||||||| | || ||||| || |||||| | || |||| |||| ||||||||| | Sbjct 9969 ACCAGCAACGTCTTATCTTTGCTGGCAAACAACTTGAAGACGGCCGCACCTTGTCCGACT 10028 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||||||||| ||| | || ||||| | ||| | ||||| ||| Sbjct 10029 ACAACATCCAAAAAGAATCGACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGC 10081 >seq7750 Length=8304 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || || ||||| ||||| || ||||| || || || || |||||||| ||| | || Sbjct 1630 GATAAGGAAGGAATTCCGCCAGATCAGCAGCGCTTGATCTTCGCCGGAAAGCAACTCGAG 1571 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | | |||||||||||||| || || ||| ||| |||||||||||| || Sbjct 1570 GACGGTCGTACACTCTCCGATTACAACATTCAGAAGGAGTCCACCTTGCATTTGGTTCTG 1511 Query 28003 CGTTTGCGTGGCGG 28016 ||| | ||||| || Sbjct 1510 CGTCTCCGTGGAGG 1497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355800588035604