Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7750 134 3e-26 seq13049 131 4e-25 seq12388 131 4e-25 seq8226 125 2e-23 seq1186 125 2e-23 seq10049 122 2e-22 seq10642 104 6e-17 seq11914 100 7e-16 seq3937 96.9 8e-15 seq11715 91.5 4e-13 seq10950 84.2 5e-11 >seq7750 Length=8304 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || ||||| || |||||||| | ||||| |||| | ||| | || ||| Sbjct 2725 AGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTCT 2784 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || |||||||| || ||||| ||||||||||| Sbjct 2785 TCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCC 2844 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| ||||| |||| ||| || || | || || ||| Sbjct 2845 TGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATGGTC 2904 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| || | || | |||||| Sbjct 2905 TTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 109 bits (120), Expect = 1e-18 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| | || |||||||| || ||||| ||||||||||| ||||| || Sbjct 1352 CTTACCGGCGAAGATCAAGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTT 1411 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||| |||||| ||||| || | ||| || || | || || ||||| || || Sbjct 1412 GGCCTTGACATTTTCGATTGTGTCAGACGCTTCGACCTCAAGGGTAATGGTCTTTCCGGT 1471 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 ||||||||||| ||| | |||||| Sbjct 1472 CAAAGTTTTTACGAAGATCTGCATT 1496 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| | || |||||||| || ||||| |||||||| ||||||||||| | Sbjct 2123 CCAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATCTTGGCC 2182 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || || ||||||||||| || | ||| || || | ||||| ||||| || || | | Sbjct 2183 TTAACGTTCTCGATGGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTTCCAGTAAGA 2242 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | ||||||| Sbjct 2243 GTCTTCACGAAGATTTGCATT 2263 Score = 91.5 bits (100), Expect = 4e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || || ||||| | || ||||| || || || || |||||||||||||| ||||| Sbjct 3067 CTTACCGGCAAAGATCAAACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTT 3126 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||| |||||| ||||| || | ||| || || | ||||| ||||| || || Sbjct 3127 GGCCTTGACATTTTCGATAGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTACCAGT 3186 Query 225690 CAAAGTTTTTATGAACACTTGCATTTTA 225717 || ||||| | ||| | |||||| || Sbjct 3187 CAGGGTTTTGACGAAGATCTGCATTGTA 3214 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || || ||||| | |||||||| || || ||||| ||||||||||| |||||||| | Sbjct 2397 CCGGCAAAGATCAAACGTTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCC 2456 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || || || ||||| ||||| | ||| || || | |||||||| || || || | | Sbjct 2457 TTAACGTTCTCAATGGTATCTGAAGCTTCGACTTCCAGTGTGATCGTTTTTCCGGTGAGA 2516 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | |||||| Sbjct 2517 GTCTTGACGAAGATCTGCATT 2537 >seq13049 Length=11502 Score = 131 bits (144), Expect = 4e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| ||||||||||||| ||||| |||| ||| || | || ||| Sbjct 10065 AGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGCCGTCT 10006 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| |||||||| ||||| ||||| || || | ||||| ||||| Sbjct 10005 TCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCC 9946 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || || || || ||| ||||||||| ||| || || | |||||||| Sbjct 9945 TGGAT-TTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGT 9887 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || | || || | ||| | ||||| || Sbjct 9886 TTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9851 Score = 122 bits (134), Expect = 2e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || || ||||| || || || || |||| |||||||| | | || Sbjct 10303 ACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGT 10244 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| |||||||| ||||| ||||| || || || || Sbjct 10243 GCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGGATTCC 10184 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| ||||| ||| || || || || || | || |||| ||| || |||| Sbjct 10183 TTCCTTGTCCTGGAT-TTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGACTTCTA 10125 Query 225671 ACGTGATCGTCTTGCCCGT 225689 | || || |||||||| || Sbjct 10124 AGGTAATTGTCTTGCCAGT 10106 >seq12388 Length=21549 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225505 ACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCT 225564 || || ||||| || || || || || | |||||| || | | || | |||||||| Sbjct 15489 ACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCA 15430 Query 225565 AGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGG 225624 ||||||||||| ||||||||||| ||||| ||||| || ||||| ||||||||||||||| Sbjct 15429 AGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 15370 Query 225625 ATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTG 225684 || || ||| || ||| || | || |||| ||| || |||| |||||||| || Sbjct 15369 ATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTA 15310 Query 225685 CCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || | || |||| || | ||||| || Sbjct 15309 CCAGTGAGGGTCTTTACAAAGATCTGCATGTT 15278 >seq8226 Length=1064 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| |||| ||| || | || || || || || || ||||||||||| | ||| || Sbjct 606 TTGTAGTCGGACAAGGTGCGGCCGTCCTCAAGTTGTTTTCCAGCGAAGATCAATCGCTGC 665 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || || ||||||||||||||||| ||||| ||| ||| ||| ||| ||||| Sbjct 666 TGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTGGCCTTGACATTTTCAATGCTGTCT 725 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||| ||| || ||||| || || |||||||| || | || || | || | |||||| Sbjct 726 GAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGACAAAAATTTGCAT 784 >seq1186 Length=9182 Score = 125 bits (138), Expect = 2e-23 Identities = 114/144 (79%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||||||||| |||||||| || |||||||| || |||||||| ||||| || Sbjct 3182 CTTACCAGCGAAGATAAGACGTTGTTGATCAGGCGGAATGCCCTCCTTGTCCTGGATTTT 3241 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||| |||||||||||| || | || || || | ||| || ||||||||||| Sbjct 3242 GGCCTTCACATTTTCGATGGTGTCGGACGCCTCGACTTCGAGCGTAATTGTCTTGCCCGT 3301 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | |||||| | ||| | ||||| Sbjct 3302 GAGAGTTTTGACGAATATCTGCAT 3325 >seq10049 Length=10599 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || |||||||| || || || || || | |||||| |||| | ||| Sbjct 9177 ACGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGT 9236 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || |||||||| | ||| || ||||| ||||| || || Sbjct 9237 ACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCC 9296 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| || || ||| | || |||| ||| || || | Sbjct 9297 TTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGACTTCGAG 9356 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || || || || | || || | ||| | ||||| || Sbjct 9357 AGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9401 Score = 118 bits (130), Expect = 3e-21 Identities = 138/184 (75%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||| ||||| ||||||||||| |||| |||||| || | || || Sbjct 8397 ACGAAGACGGAGAACAAGATGGAGGGTGGATTCTTTCTGGATATTGTAGTCAGACAGGGT 8456 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||| ||||| | ||| || ||||| ||||| || || Sbjct 8457 GCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGCGGGATTCC 8516 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||| |||||||| ||| || || || ||| || | || |||| ||| || |||| Sbjct 8517 GTCCTTATCTTGGAT-TTTGGCTTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTA 8575 Query 225671 ACGT 225674 | || Sbjct 8576 AGGT 8579 >seq10642 Length=3424 Score = 104 bits (114), Expect = 6e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || |||||||| ||||||||||| || || ||||||||||| || ||||| ||||| Sbjct 2127 GAAGATCTGACCATCTGTAATAGAGATTACGTTGGTAGGGATATATGCCGAAACGTCACC 2068 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||||||||||||| | || | ||||| | ||| |||||||| Sbjct 2067 TGCTTGTGTTTCGATGATTGGAAGAGCTGTCAATGAACCACCACC 2023 >seq11914 Length=36757 Score = 100 bits (110), Expect = 7e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || |||||||| || || || ||||| || || || ||||||||||| |||||||| Sbjct 2906 CTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTT 2965 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||| ||||||||||| || | || || || | ||||| ||||| ||||| Sbjct 2966 GGCCTTCACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATTGTCTTACCCGT 3025 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 | ||||| | ||| | |||||| Sbjct 3026 TAGGGTTTTGACGAATATCTGCATT 3050 >seq3937 Length=20801 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || || ||||| | ||||| || || || ||||| |||||||||||||||||||| | Sbjct 18853 CCGGCAAAGATCAAGCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTAGCC 18912 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| |||||||||||| |||| || || || | || || |||| || |||||| Sbjct 18913 TTGACATTTTCGATGGTGTCGGAGGCCTCAACCTCAAGGGTAATGGTCTCACCAGTCAAA 18972 Query 225694 GTTTTTATGAACACTTGCATTTTATG 225719 || || | ||| | | |||| |||| Sbjct 18973 GTCTTGACGAAGATCTACATTGTATG 18998 >seq11715 Length=6190 Score = 91.5 bits (100), Expect = 4e-13 Identities = 91/113 (81%), Gaps = 4/113 (4%) Strand=Plus/Minus Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825 |||||| |||||| |||||| ||||||||| | |||||||| | || ||| | ||||| Sbjct 5434 TGAGAGGATGATC-GCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 5377 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATGTTACGTGA 6878 |||||| ||||||| ||||||||||| |||| ||||| || ||| ||||| Sbjct 5376 CAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGA 5324 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 372624 GGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGT 372683 |||| ||||| || ||||||||||||||||| ||||||||||| ||| || |||| | Sbjct 1722 GGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAAGTCGC 1663 Query 372684 AAAACGATGTATAGGGTCTGAC 372705 || |||| |||||||||||||| Sbjct 1662 AAGACGACGTATAGGGTCTGAC 1641 >seq10950 Length=25243 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || ||||| ||||| ||||||||||| || || || ||||| || || ||||| || | Sbjct 24617 CCGGCGAAAATAAGGCGTTGTTGGTCTGGAGGGATTCCTTCTTTATCCTGGATTTTGGCC 24676 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || || || ||||||||||| ||| || || | ||||| || || || |||||| Sbjct 24677 TTGACGTTCTCAATGGTGTCTGACCCTTCGACTTCGAGGGTGATGGTTTTTCCGGTCAAA 24736 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | || | ||||||| Sbjct 24737 GTCTTGACAAAGATTTGCATT 24757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192313439330888