Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq4764 203 9e-48 >seq4764 Length=15780 Score = 203 bits (224), Expect = 9e-48 Identities = 325/459 (71%), Gaps = 12/459 (3%) Strand=Plus/Plus Query 23373 TCATACAATGAGCAGCGAGAATGGTGTTTTGCATGTGATAGGCGTGTTCAATGGCAAACT 23432 || ||| |||| || || | ||||||| ||||| | || ||||| ||||||| |||| Sbjct 11108 TCGTACCGTGAGTAGTGAAAGTGGTGTTCTGCATATTATTGGCGTATTCAATGACAAAAA 11167 Query 23433 ATCTACTATTGCCCATGAGTGCGCTCACATGGCATTCGATATCTGCTCA-AGGGTCGGTG 23491 || || | || ||||| ||||| || | || ||||||||||| ||| | || |||| Sbjct 11168 CTCGACATTAGCTCATGAATGCGCCCATGTTGCTTTCGATATCTG-TCATCGTGTTGGTG 11226 Query 23492 TTGATGTTGAACCAGGAAGAGCCAACGAGACTTACTGCTACTTAATGAGCAGGCTTGTTG 23551 | |||| |||| || || ||||| | |||||| | || ||||| | |||| Sbjct 11227 TGAATGTGAGTACAGGTGAGGCAAATGAGACATTTTGCTACCTGATAAGCAGATTGGTTG 11286 Query 23552 AGTTCTGCGAGCGACATATCAAAAAGCCGGAGTGACCCGGCTTGATTATTACTT----TT 23607 |||| |||||| | ||||||||||||||||||||||||||| | | |||||| | Sbjct 11287 AGTTTTGCGAGAAGCCTATCAAAAAGCCGGAGTGACCCGGCTT-AGTTTTACTTACCGCT 11345 Query 23608 TGCTGTCTGGAGTTCGCTTATCTAATACCCAGCCATTACCTGGCTTTGTTGTTGGTGGAA 23667 |||| | ||||||| ||||| | | |||| ||||| | || | ||||||||| | Sbjct 11346 TGCTATTGGGAGTTCTTTTATCAAGTTCCCAAGTGTTACCGGATTTAGATGTTGGTGGCA 11405 Query 23668 GCCTTTCGTTGTCCTTGACGGTGGCAAAATTGTCTTTCTTACCGCCTCGCGGGCCAACTT 23727 ||||||| ||| | || ||||| ||||| || | || ||||| || || || |||| Sbjct 11406 ATTTTTCGTTATCCCTTACAGTGGCGAAATTATCAGTTTTGCCGCCACGAGGACCTACTT 11465 Query 23728 CTTGGTATATTCCGCCGTTTTTTCCTGTGTTTTCACCTGGTTTTTTCGCCATGATATACC 23787 | | || || ||||| | || || || ||||| || || || || |||| || | | Sbjct 11466 CACGATAGATACCGCCATCCTTACCAGTATTTTCTCCGGGCTTCTTACCCATAAT-GATC 11524 Query 23788 TCAACA---TACACCCGTTATTGGGCGA-TTAAATATTG 23822 || | | | ||| || ||||| || | |||||||||| Sbjct 11525 TCCATATTGTTCACTCGATATTGAGCCAGTTAAATATTG 11563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133644577828904