Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6327 192 8e-44 seq2527 154 2e-32 seq2468 138 2e-27 >seq6327 Length=14581 Score = 192 bits (212), Expect = 8e-44 Identities = 499/763 (65%), Gaps = 37/763 (5%) Strand=Plus/Minus Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165 || ||||| || ||||| ||||| || | || ||||| || | ||| |||| || || Sbjct 7589 AGCAGATGGGGGTTAACAATTTGGAAGTTACCGGACAAAACGCGTCGACTGTAGATGTTG 7530 Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225 || || || || | |||||||||||||| | |||||||| || || || |||||| Sbjct 7529 GACGTGTAGGGCTCAATCGATTCATTGTTTCCAAGGATTTGAGCTGTGGAGGCCGTTGGC 7470 Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285 || || || | | | ||| || | | ||||| | |||||| || || ||| | Sbjct 7469 ATTGGGGCGAGAAGAAGACTGTTACGCACTCCATGCTTCGCGATTTTCTCCTTCAGAGCT 7410 Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAAC------------------ATCCCAAAGATCG 77327 ||||| || |||||| ||| | ||| || ||| | || Sbjct 7409 ACCCAATTGCACTGATCTGTAGGAAGAACTGGCTTTCCATCTTCTGTATTCCACATTTCA 7350 Query 77328 TATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTT 77387 ||||| |||||||| | || || || || | || || ||||||| || | | | Sbjct 7349 TATTGAAGAATTCCTTGGCTTACAGGAGACCCTTCGTACGTCTCATAAGTACCATATTTC 7290 Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447 ||||||| |||| | || || | || || | ||||| ||||| || || |||| Sbjct 7289 TCAGCTAATTCAGAGGATGCCTCAAGAGCACCATGGTAAATGGTTTCAAAGATTCTCTTG 7230 Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507 |||||||| | |||| | |||| |||||||| | | | || || ||||||||| Sbjct 7229 TTGAGATCACGAGCTTGAGGACTAGTGAACGGATACCGCATCAACATGAAAGCATCTGCT 7170 Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567 || || |||||||| || ||||| || | ||| | ||| || || ||| |||||| ||| Sbjct 7169 AAACCTTGAACTCCGATTCCAATTGGGCGATGACGCTTGTTTGATGTTTCAGCTTCGGGA 7110 Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATT---TCTAACAAC-----TACTT 77619 | ||||| |||| ||| |||||||| || || || | | ||||| || || Sbjct 7109 ACCGGATAGAAATTGCAGTCGATAATTTTGTTAAGGTTACGTGTGACAACCTTGGTAATT 7050 Query 77620 TAACCACGTCCTTTAGTTTAAGAAAATCAAA---TCTTCCATCTATAACAAACATGTTCA 77676 | | | | ||| || ||||||| | | | ||| | || || ||||| Sbjct 7049 GCATGAAG-CTTTTCGT-------AATCAAAAGTTTTGTCTTCTTTGACGAATCGGTTCA 6998 Query 77677 AAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCT 77736 ||| || || |||| ||| ||||| || || |||| || | || || | || | Sbjct 6997 GAGCAATCGAAGCTAAATTGCAAACAGCGACTTCATCAGGAGACGAGTACTGCACGATTT 6938 Query 77737 CGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGC 77796 | ||||| ||||| ||| || ||||| || ||||||| || || |||| |||||| Sbjct 6937 CCGTACAGAGATTGGAACACTTAATAGTTCCAAGATTTTTCTGATTCGACTTTCTATTGC 6878 Query 77797 ATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTG 77839 | | || || ||||| || |||| | || |||||||| || Sbjct 6877 AAGCATCTTTGTAAAGCATGTACGGTATACCAGTTTCAATTTG 6835 Score = 170 bits (188), Expect = 3e-37 Identities = 343/500 (69%), Gaps = 24/500 (5%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || ||||| |||||||| | || | || || ||||| || |||| | ||| ||||| Sbjct 5941 TTGTTACCGCCCTGATCGACGTAACGTGCAGTATTATTGTACACTCGGAGCATAGGAATC 5882 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 | ||| || ||||| ||||| ||||||| ||| ||||| ||||||||| | Sbjct 5881 AAACCATTCGATGTACCATTGGTTCCAGCAATCATTGTTCCAGATGCGCGAATGCAATG- 5823 Query 78273 ATGGATATC--CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTAT 78330 || || | || || || ||||| ||| || || || || || | | || | Sbjct 5822 -TGCATTTAGGCCAATACCACCTGCTGACTTTGAAATGAGGGCACACTGCCAAAGAGTCT 5764 Query 78331 CGTAGATACCCTCTAT---ACTGTCATCCATCATGTTAAGAAGAA--AACAGCTAGACAT 78385 | |||| || || || | ||||| |||| || |||| || || |||| ||| Sbjct 5763 TGAAGATCCCATCAATTGAATCGTCATGCATC--GTCAAGAGAAAGCAAGAGCT---CAT 5709 Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445 ||| | | | |||||||||||| || | ||| ||||| ||||| || ||||| || Sbjct 5708 TTGTGGTTTACAAGTTCCTGCATTGAAAAGTGTGGGAGAAGCATGAGTGAACCAGCGATC 5649 Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCG 78504 || | | |||||| ||||| ||||| | || || || | ||| |||||||| || | Sbjct 5648 GGACATCAAATTGTAGGTTTCGATAGCGGCCTCGATATCTTCCTTG-TGAATTCCAACGG 5590 Query 78505 CTACACGCATCAACATATGCTGAGGTCTTTCAAC----CGTCTTATTATTTATTTTCAAC 78560 | |||||||| | || ||| ||||| | ||||| |||| || |||||| ||| Sbjct 5589 CGACACGCATAAGCAAATGTTGAGGACGCTCAACAACCCGTCC----ATCTATTTTTAAC 5534 Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620 || ||||| ||||||||||| ||||| |||||| ||||||| || |||| || || Sbjct 5533 AAATATGACCGCTCCAAAGTTTTGAAACCGAAATAGGTGTATGAGAAATCTCGGTCATAC 5474 Query 78621 ATAATAACAGAATTTAGTTT 78640 | |||| |||||| | ||| Sbjct 5473 ACAATAGAAGAATTCAATTT 5454 Score = 150 bits (166), Expect = 2e-31 Identities = 395/605 (65%), Gaps = 21/605 (3%) Strand=Plus/Minus Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 || ||| || || | || ||||||||||| | ||||| || || ||||| || || Sbjct 8347 GGCATAGCTTGGTTTCGCCATATGAATATTAAGAGACTGCGACTGGTCAATGAAGGCCCC 8288 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 | ||||| ||||||| || || |||||||| ||||||||| | ||| ||| | | Sbjct 8287 ACGGTCAGCAGCCATTTCAATGATATCCTTTTGAGAAATTTCCCATACAGTCTTGTACAG 8228 Query 77000 TTGTTTGATATCATCTGGAAGGTTTGT-ATT--TTGAATGGAACCACCATCTGATATAAT 77056 | || | || | ||||| | | ||| ||| || || |||| | | || || Sbjct 8227 GTTTTGCAAGTCCTTTGGAATTTCAGCGATTCCTTGGATCGATCCACTCTGCGCAATGAT 8168 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 | |||| || | || || ||||| || || || | | | | || ||||| || Sbjct 8167 TCTATTTTTCAGATTGTCGTTCCATAAGTTAAGTTCAACGAGATCCTTCAGCAGATGGGG 8108 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 |||||| ||||| ||||| || || || || | ||||| || || || || || || Sbjct 8107 ATTAACAATTTGGAATTCACCGGATAAAACGCGTCGAGTATAGATGTTGGACGTGTAGGG 8048 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 || | |||||||||||||||| ||||||||| || ||||| |||||||| || || | Sbjct 8047 CTCGATCGATTCATTGTTTCCCAGAATTTGAGCTGTGGAAGCCGTTGGCATTGGGGCGAG 7988 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 | | ||| || | | ||||| | ||||| || || ||| | ||||| || Sbjct 7987 AAGAAGACTGTTACGCACTCCATGCTTCGCAATTTTCTCCTTCAGAGCTACCCAATTGCA 7928 Query 77297 AAGATCTGAAGGTACAAC------------------ATCCCAAAGATCGTATTGTAGAAT 77338 | |||| ||| ||||| || ||| | || ||||| ||||| Sbjct 7927 CTGGTCTGTAGGAACAACTGGCTTTCCATCTTCTGTATTCCACATTTCATATTGGAGAAT 7868 Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 ||| | || | ||||| | || || ||||||| || | | | ||||||||||| Sbjct 7867 TCCTTGGCTTACTGGAGATCCTTGGTACGTCTCATAAGTACCATATTTCTCAGCTAGTTC 7808 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 ||| || || | || || | ||||| ||||| || || |||| |||||||| | Sbjct 7807 ACAGGATGCCTCAAGAGCACCATGGTAAATGGTTTCAAATATTCTCTTGTTGAGATCACG 7748 Query 77459 TGCTT 77463 |||| Sbjct 7747 AGCTT 7743 Score = 147 bits (162), Expect = 3e-30 Identities = 335/496 (68%), Gaps = 16/496 (3%) Strand=Plus/Minus Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || ||||| || ||||| | || | || || ||||| || |||| | ||| || || Sbjct 4561 TTGTTACCGCCTTGATCGACGTAACGAGCAGTATTATTGTACACTCGGAGCATAGGGATT 4502 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTAC 78270 | ||| || ||||||||||| ||||||| || ||||| ||||||||| | | | Sbjct 4501 AAACCATTCGATGTTCCATTGGTTCCAGCGATCATTGTTCCAGATGCGCGAATGCAATGC 4442 Query 78271 TAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTAT 78330 || | | || || || ||||| ||| || || || || || | | || | Sbjct 4441 GCATTTAGA--CCAATACCACCTGCTGACTTCGAAATAAGGGCACACTGCCAGAGAGTTT 4384 Query 78331 CGTAGATACCCTCTAT---ACTGTCATCCATCATGTTAAGAAGAA--AACAGCTAGACAT 78385 ||| || || || || | ||||| |||| || | || ||| || |||| ||| Sbjct 4383 TGTAAATCCCATCAATTGAATCGTCATGCATC--GTCAGGAGGAAGCAAGAGCT---CAT 4329 Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445 ||| | | |||||||||||| || | ||| ||||| ||||| || ||||| || Sbjct 4328 TTGTGGTTTGCAAGTTCCTGCATTGAAAAGTGTAGGAGAAGCATGAGTGAACCAGCGCTC 4269 Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCG 78504 || | | |||||| ||||| ||||| | || || || | ||| |||||||| || | Sbjct 4268 GGACATCAAATTGTAGGTTTCGATAGCGGCATCGATATCTTCCTTG-TGAATTCCAACAG 4210 Query 78505 CTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGT 78564 | |||||||| | || ||| ||||| | || || || || ||||| ||||| | Sbjct 4209 CGACACGCATAAGCAAATGTTGAGGACGCTCGACAACCTGTCCATCCATTTTTAACAAAT 4150 Query 78565 ATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAA 78624 |||| ||||||||||| ||||| ||||| ||||||| || || | || || | || Sbjct 4149 ATGACCGCTCCAAAGTTTTGAAACCGAAATATGTGTATGAGAAATCCCGGTCATACACAA 4090 Query 78625 TAACAGAATTTAGTTT 78640 || |||||| | ||| Sbjct 4089 TAGAAGAATTCAATTT 4074 >seq2527 Length=10055 Score = 154 bits (170), Expect = 2e-32 Identities = 401/600 (67%), Gaps = 15/600 (3%) Strand=Plus/Minus Query 47975 ATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAAC 48034 ||| ||||| |||| |||||| ||| | | ||||||||| || || | | || Sbjct 5732 ATCAGCAACATATTCAATATATTGCGACATGAGTCGACAATTCATACCAATCATATCCAC 5673 Query 48035 TGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGT 48094 ||| ||||| || || ||| |||| |||||||| ||||| || ||| || | Sbjct 5672 TGGAAGAGCTTCGGTTAGATACTCCTGTTCGATTTGAACAGCTTCACGTATAATT--TCA 5615 Query 48095 TACCGTT--TCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCA 48152 || || || || ||||| | | || || ||| ||||| |||||||| Sbjct 5614 CACACTTGCTCTTCTGTTGGTTTTTGTTCGAGATACTTGTACACCAAACACGCAAAATCT 5555 Query 48153 CAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGT 48212 | ||| || ||||||||||| |||||| |||||| ||| | ||| ||||| ||| Sbjct 5554 CGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTCAAACCCGGCATAAGT 5495 Query 48213 CCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACG 48272 |||||||| || |||||||| ||||| || || || ||||| || || || ||||| || Sbjct 5494 CCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAAAAGATTCCTTCCACT 5435 Query 48273 GCCGCAAATGCGGTAAGTCTCTCTCCGTAACTG--GC-TTC--GTTGTGTATCCACCGTT 48327 || |||||||| || | | | | || || || ||| || | ||||| | Sbjct 5434 GCAGCAAATGCAACAA--CACGCATCCCAAATGAAGCATTCTTATTTTCAATCCATTGAA 5377 Query 48328 GTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 48387 || |||||| || ||||| |||| | | || | | || || || ||||| | Sbjct 5376 TTGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCGTTGAAGAGTGTAT 5317 Query 48388 ttttttC-ATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 ||| ||| | || ||| |||| ||| || || || || ||||||||| |||||| Sbjct 5316 TTTGTTCGACTG-GATCGTTAATGTACGTTTCGATCAATTTCGAATACATTTCAGAGTGA 5258 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC- 48505 || ||| | ||| |||||||| ||| ||| | || || | |||| || || Sbjct 5257 ATTCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCTCAGGCATCTTCACTTCT 5198 Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565 || |||| ||| || | ||| |||||||| |||||||| ||| ||||||||||| Sbjct 5197 TGTGTAAAA-CGTCCAATGAGATTTTCATTTACGATTCCATCTGAAGCTGCAAAAAATGC 5139 >seq2468 Length=4028 Score = 138 bits (152), Expect = 2e-27 Identities = 306/458 (67%), Gaps = 11/458 (2%) Strand=Plus/Plus Query 48133 ACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAA 48192 |||| |||||||| ||||| | ||| || |||||||||| ||||| ||| || Sbjct 3101 ACATCAAACATGCGAAATCTCGATGGAGTCCTTCATCTCGTGAAATTAGTTCATTGC--- 3157 Query 48193 ATGTGAGAC----CGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248 |||||| | | ||||| |||||||| || || | |||||| || || || || ||| Sbjct 3158 -TGTGAGTCAACCCAGGCATGAGTCCACGCTTCTTCAACCAAAAAATGGCAGCAAACGAT 3216 Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCT 48308 || || || || || ||||| ||||| ||||| ||| | | | ||| | || Sbjct 3217 CCGGAGAAAAAGATTCCTTCCACGGCAGCAAAAGCGATCACGCGAATTCCAAACGAAGCA 3276 Query 48309 TCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTT 48365 | || | | ||||| || | ||||| || || |||||||| | || || | | Sbjct 3277 TTCTTATCTCCAATCCATCGGAGAGCCCAGTCGGCTTTCTTCTTAATGCAGGGAAACTCT 3336 Query 48366 TCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAA 48425 | |||||||||||||| ||| | ||| | ||| ||||||| | || || | Sbjct 3337 TGAATAGCATTAAAGAGCGTGTTCCTCTCAGTTAGATCGGTAACGTATGCTTCGATCATC 3396 Query 48426 AGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTC 48485 |||||| ||||| ||||| ||| | || ||||| || | ||| || | | Sbjct 3397 TTTGAATACATCTCGGAATGAATTCCTTCGACGGCAATCTGGAAACTGTAGAACGAGAGC 3456 Query 48486 GCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCA 48545 ||||| | |||| || ||| |||||| ||| | | ||| || ||||| |||||| Sbjct 3457 GCTTCAGGCATCTTCACTTCCTGTGTAAATCGCTCAACGAGATTTTCGTTTACGATTCCA 3516 Query 48546 TCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAA 48583 || |||||||||||| || || ||| | |||||| Sbjct 3517 TCTGAAGCAGCAAAAAACGCCAAAACACGGGAAATAAA 3554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694545044753280