Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq6327 208 1e-48 seq2468 147 3e-30 seq2527 136 6e-27 >seq6327 Length=14581 Score = 208 bits (230), Expect = 1e-48 Identities = 512/780 (66%), Gaps = 61/780 (8%) Strand=Plus/Minus Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569 ||||||| ||| ||||| || || || |||| | ||||||||| | | |||||| Sbjct 6226 ATATAACTTTTCGAATTCTTCCCCGTAACTATCAGGGAGACCAGGACACTTGTGCGGACA 6167 Query 76570 CATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAG 76629 ||| | ||||| || |||||| || || || | ||| || | |||||| ||||| | Sbjct 6166 CATAAGAGACCAATCCTTATCTTCTTTCACGCGCTCCATGAACAAATCAGGAATCCACAA 6107 Query 76630 AGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCT-A 76688 ||| ||| ||||| || | | |||||| ||| ||||| || || | |||| | Sbjct 6106 TGCATAAAACAGATCCCGAGCGCGCTCTTCTTCCGATCCAGTATTTTTCTTTA-ATCTGA 6048 Query 76689 GGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTT 76748 |||| || | |||||||| |||||| ||||| | || || || | | | || || || | Sbjct 6047 GGAATTCGAAAATATCAGCATGCCAAGGTTCAACGTAAATAGCGAAAGCTCCAGGACGCT 5988 Query 76749 TA-----------------------------------------------TTACCTCCCTG 76761 | ||||| ||||| Sbjct 5987 AAATACACAAAGTTGTTCTTCTATCGACATAGGAATCTAACAAACCTTGTTACCGCCCTG 5928 Query 76762 ATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGT 76821 ||| | || | ||||| ||||| || |||| | ||| ||||| | || || ||||| Sbjct 5927 ATCGACGTAACGTGCAGTATTATTGTACACTCGGAGCATAGGAATCAAACCATTCGATGT 5868 Query 76822 ACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTAT 76881 |||||| ||||||| ||| ||||| |||| ||||| | | |||||| || Sbjct 5867 ACCATTGGTTCCAGCAATCATTGTTCCAGATGCGCGAATGCAATGTGCATTTAGGCCAAT 5808 Query 76882 TCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCAT--AGATGCCCTCT 76939 || ||||| || || || || ||||| | ||| | ||| | |||| || || Sbjct 5807 ACCACCTGCTGACTTTGAAATGAGGGCACACTGC--CAAAGAGTCTTGAAGATCCCATCA 5750 Query 76940 ATACTATCATCCATCAT-GTTAAGAAGAA--AACAGCTAGACATTTGATGATGAACAGTT 76996 || ||| || ||| || |||| || || |||| |||||| | | | |||| Sbjct 5749 ATTGAATCGTCATGCATCGTCAAGAGAAAGCAAGAGCT---CATTTGTGGTTTACAAGTT 5693 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 |||||||| || | ||| ||||| |||||||||||||| || || | | |||||| Sbjct 5692 CCTGCATTGAAAAGTGTGGGAGAAGCATGAGTGAACCAGCGATCGGACATCAAATTGTAG 5633 Query 77057 GTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACAT 77115 ||||| ||| | || || ||||| | ||| |||||||| || ||||||||||| | || Sbjct 5632 GTTTCGATAGCGGCCTCGATATCTTCCTTG-TGAATTCCAACGGCGACACGCATAAGCAA 5574 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 ||| ||||| || || ||| | || |||||| ||||| ||||| |||||||| Sbjct 5573 ATGTTGAGGACGCTCAACAACCCGTCCATCTATTTTTAACAAATATGACCGCTCCAAAGT 5514 Query 77176 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTT 77235 ||| ||||| |||||| ||||||| || |||| || || | |||| ||||| | ||| Sbjct 5513 TTTGAAACCGAAATAGGTGTATGAGAAATCTCGGTCATACACAATAGAAGAATTCAATTT 5454 Score = 172 bits (190), Expect = 8e-38 Identities = 339/494 (69%), Gaps = 12/494 (2%) Strand=Plus/Minus Query 76748 TTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATA 76807 || ||||| || ||||| | || | ||||| ||||| || |||| | ||| || || Sbjct 4561 TTGTTACCGCCTTGATCGACGTAACGAGCAGTATTATTGTACACTCGGAGCATAGGGATT 4502 Query 76808 ATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTAC 76865 | || || ||||| ||||| ||||||| || ||||| |||| ||||| | | | Sbjct 4501 AAACCATTCGATGTTCCATTGGTTCCAGCGATCATTGTTCCAGATGCGCGAATGCAATGC 4442 Query 76866 TAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGT 76925 || ||| || || || ||||| || || || || ||||| | | || | Sbjct 4441 GCATT--TAGACCAATACCACCTGCTGACTTCGAAATAAGGGCACACTGCCAGAGAGTTT 4384 Query 76926 CATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGAA--AACAGCTAGACATTT 76982 || || || || || ||| || ||| || | || ||| || |||| ||||| Sbjct 4383 TGTAAATCCCATCAATTGAATCGTCATGCATCGTCAGGAGGAAGCAAGAGCT---CATTT 4327 Query 76983 GATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAG 77042 | | | |||||||||||| || | ||||||||| |||||||||||||| || | Sbjct 4326 GTGGTTTGCAAGTTCCTGCATTGAAAAGTGTAGGAGAAGCATGAGTGAACCAGCGCTCGG 4267 Query 77043 AAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCG 77101 | | | |||||| ||||| ||| | || || ||||| | ||| |||||||| |||||| Sbjct 4266 ACATCAAATTGTAGGTTTCGATAGCGGCATCGATATCTTCCTTG-TGAATTCCAACAGCG 4208 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 |||||||| | || ||| ||||| || || ||| || || ||||| ||||| ||| Sbjct 4207 ACACGCATAAGCAAATGTTGAGGACGCTCGACAACCTGTCCATCCATTTTTAACAAATAT 4148 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 77221 || ||||||||||| ||||| ||||| ||||||| || || | || || | |||| Sbjct 4147 GACCGCTCCAAAGTTTTGAAACCGAAATATGTGTATGAGAAATCCCGGTCATACACAATA 4088 Query 77222 ACCGAATTTAGTTT 77235 ||||| | ||| Sbjct 4087 GAAGAATTCAATTT 4074 Score = 154 bits (170), Expect = 2e-32 Identities = 400/612 (65%), Gaps = 21/612 (3%) Strand=Plus/Minus Query 75475 GGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 75534 || ||| || || | || ||||||||||| | ||||| || || ||||| || || Sbjct 8347 GGCATAGCTTGGTTTCGCCATATGAATATTAAGAGACTGCGACTGGTCAATGAAGGCCCC 8288 Query 75535 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594 | ||||| ||||||| || || |||||||| ||||||||| | ||| ||| | | Sbjct 8287 ACGGTCAGCAGCCATTTCAATGATATCCTTTTGAGAAATTTCCCATACAGTCTTGTACAG 8228 Query 75595 TTGTTTGATATCATCTGGAAGATTTGT-ATT--TTGAATGGATCCGCCATCAGATATAAT 75651 | || | || | ||||| | | ||| ||| || ||||| | | | || || Sbjct 8227 GTTTTGCAAGTCCTTTGGAATTTCAGCGATTCCTTGGATCGATCCACTCTGCGCAATGAT 8168 Query 75652 TGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGG 75711 | |||| || | | || ||||| || || || | | | | || ||||| || Sbjct 8167 TCTATTTTTCAGATTGTCGTTCCATAAGTTAAGTTCAACGAGATCCTTCAGCAGATGGGG 8108 Query 75712 ATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGG 75771 |||||||||||| ||||| || || || || | |||||| || || || || || || Sbjct 8107 ATTAACAATTTGGAATTCACCGGATAAAACGCGTCGAGTATAGATGTTGGACGTGTAGGG 8048 Query 75772 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCAC 75831 || | |||||||||||||||| ||||||||| || ||||| || ||||| || || | Sbjct 8047 CTCGATCGATTCATTGTTTCCCAGAATTTGAGCTGTGGAAGCCGTTGGCATTGGGGCGAG 7988 Query 75832 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 75891 | | ||| || | | ||||| | ||||| || || ||| | ||||| || Sbjct 7987 AAGAAGACTGTTACGCACTCCATGCTTCGCAATTTTCTCCTTCAGAGCTACCCAATTGCA 7928 Query 75892 AAGATCTGATGGTACAAC------------------ATCCCAGAGATCGTATTGTAGAAT 75933 | |||| || ||||| || ||| | || ||||| ||||| Sbjct 7927 CTGGTCTGTAGGAACAACTGGCTTTCCATCTTCTGTATTCCACATTTCATATTGGAGAAT 7868 Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| | ||| | ||||| | || || || ||||| || | || ||||||||||| Sbjct 7867 TCCTTGGCTTACTGGAGATCCTTGGTACGTCTCATAAGTACCATATTTCTCAGCTAGTTC 7808 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || ||||| | ||||| | ||||| ||||| || || |||| || ||||| | Sbjct 7807 ACAGGATGCCTCAAGAGCACCATGGTAAATGGTTTCAAATATTCTCTTGTTGAGATCACG 7748 Query 76054 CGCTTCAAGACT 76065 |||| | |||| Sbjct 7747 AGCTTGAGGACT 7736 >seq2468 Length=4028 Score = 147 bits (162), Expect = 3e-30 Identities = 429/652 (66%), Gaps = 19/652 (3%) Strand=Plus/Plus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| ||||| |||| || ||| | ||| | |||||||||| || || | | ||| Sbjct 2943 ATCAGCAACATATTCGATGTACTTGGACATGAGAACACAATTCATACCGATCATGTCGAC 3002 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583 || || | ||| || || | ||||| || ||| ||||| ||| ||| || | Sbjct 3003 AGGAAGGGACTCGGTGAGGTATTCTTGCTCTATATGCACAGCTTCCCGTATGATT--TCA 3060 Query 46584 TACTGTT--TCCTCACTTGGTGGATGCATCAAA-TGTTTAAACATTAAACATGCAAAATC 46640 ||| || || | || || || |||| | ||| |||| |||||||| ||||| Sbjct 3061 TACACTTGCTCGTTGCTAGGCTTCTGG-TCAAGGTATTTGTACATCAAACATGCGAAATC 3119 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG----CCCAGGCA 46696 | ||| || |||||||||| ||||| ||| || |||||| |||||||| Sbjct 3120 TCGATGGAGTCCTTCATCTCGTGAAATTAGTTCATTGC----TGTGAGTCAACCCAGGCA 3175 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | ||||||||||| || | |||||| || || || || ||||| || || || || |||| Sbjct 3176 TGAGTCCACGCTTCTTCAACCAAAAAATGGCAGCAAACGATCCGGAGAAAAAGATTCCTT 3235 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | || || || || |||| | | ||| | |||| |||| |||||| | Sbjct 3236 CCACGGCAGCAAAAGCGATCACGCGAATTCCAAACGAAGCATTCTTATCTCCAATCCATC 3295 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAA 46873 ||||||| || || || ||||| | || || | || |||||||||||||| Sbjct 3296 GGAGAGCCCAGTCGGCTTTCTTCTTAATGCAGGGAAACTCTTGAATAGCATTAAAGAGCG 3355 Query 46874 AGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAAT 46933 ||| | ||| ||| |||| |||| || || | |||||| || |||| Sbjct 3356 TGTTCCTCTCAGTTAGATCGGTAACGTATGCTTCGATCATCTTTGAATACATCTCGGAAT 3415 Query 46934 GAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCT 46993 |||| ||| | || ||||| || | ||| || | ||||||| |||| || | Sbjct 3416 GAATTCCTTCGACGGCAATCTGGAAACTGTAGAACGAGAGCGCTTCAGGCATCTTCACTT 3475 Query 46994 -CTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAAT 47052 |||| |||||| ||| | ||| || || || |||||||| |||||||||||| Sbjct 3476 CCTGT-GTAAATCGCTCAACGAGATTTTCGTTTACGATTCCATCTGAAGCAGCAAAAAAC 3534 Query 47053 GCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGT 47104 ||||| ||| | |||||| | | ||||| || || || || | ||||| Sbjct 3535 GCCAAAACACGGGAAATAAAGAACTGCTCATCAGTGGTAAGGTTGTGCCAGT 3586 >seq2527 Length=10055 Score = 136 bits (150), Expect = 6e-27 Identities = 394/600 (66%), Gaps = 15/600 (3%) Strand=Plus/Minus Query 46464 ATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGAC 46523 ||| ||||| |||| ||||| ||| | | ||||||||| || || | | || Sbjct 5732 ATCAGCAACATATTCAATATATTGCGACATGAGTCGACAATTCATACCAATCATATCCAC 5673 Query 46524 CGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGT 46583 || ||||| || || ||| |||| ||||| || ||||| || ||| || Sbjct 5672 TGGAAGAGCTTCGGTTAGATACTCCTGTTCGATTTGAACAGCTTCACGTATAATTTCACA 5613 Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACA 46643 ||| || || ||||| || | || || ||| ||||| |||||||| | Sbjct 5612 CACTTGCTCTTCTGTTGGTTTTTGTTCGAGATACTTGTACACCAAACACGCAAAATCTCG 5553 Query 46644 ATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCC 46703 ||| || ||||||||||| |||||| |||||| ||| | || ||||| ||||| Sbjct 5552 ATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTCAAACCCGGCATAAGTCC 5493 Query 46704 ACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGC 46763 ||| || || |||||||| || || || || || ||||| || || || ||||| || || Sbjct 5492 ACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAAAAGATTCCTTCCACTGC 5433 Query 46764 CGCGAATGCGACAAGTCTCTCTCCGTAACTG--GCA---TCATTATGAATCCACCTTTGA 46818 || ||||| |||| | | | | || || ||| | ||| | |||||| |||| Sbjct 5432 AGCAAATGCAACAA--CACGCATCCCAAATGAAGCATTCTTATTTTCAATCCA---TTGA 5378 Query 46819 ---GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 46875 | |||||| || || || |||| | | || | | || || || ||||| Sbjct 5377 ATTGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCGTTGAAGAGTGTA 5318 Query 46876 tttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGA 46935 |||| ||| | ||| |||| || || || || || ||||||||| || ||| Sbjct 5317 TTTTGTTCGACTGGATCGTTAATGTACGTTTCGATCAATTTCGAATACATTTCAGAGTGA 5258 Query 46936 ATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC- 46994 || ||| | || |||||||| ||| ||| | ||| |||| |||| || || Sbjct 5257 ATTCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCTCAGGCATCTTCACTTCT 5198 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 ||| |||| ||| || | ||| ||||| || |||||||| ||| ||||||||||| Sbjct 5197 TGTGTAAAA-CGTCCAATGAGATTTTCATTTACGATTCCATCTGAAGCTGCAAAAAATGC 5139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712807390736640