Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq2795 147 1e-30 seq11290 100 2e-16 >seq2795 Length=11366 Score = 147 bits (162), Expect = 1e-30 Identities = 346/511 (68%), Gaps = 20/511 (4%) Strand=Plus/Plus Query 87922 GCAAAATACGGCACCAGTGTCGATATACTGCTGATTCCAGAA-TGTCTTCGGGCTTTTCA 87980 || |||||| || || ||||||||||| |||| |||||| ||| || | || Sbjct 4495 GCCAAATACCGCCCCTGTGTCGATATAAAGCTGGTTCCAGTTCTGT-TTGGTTATTGGTG 4553 Query 87981 CCGGAGTGTGACCAAAGATAAAACGATCTGCGCCCGAAATTTCGCCACCAATATCATCCA 88040 | |||||||| || ||||| || |||| ||||| | ||| | ||||| |||||||| | Sbjct 4554 CGGGAGTGTGGCCGAAGATGAACAGATCAGCGCCTGTGATTGCTCCACCGATATCATC-A 4612 Query 88041 TCGAATCACTG---ATACGCTCGCGCGCCCAGACAACG--TTGAAAAGCGGCACCTCCTT 88095 | | || || || || | || ||||| || ||| | | ||||| | Sbjct 4613 CC--AGCATTGTAAATCCGGCCTCGGTTCCAGATGACAGATTGCCAGTCA--ACCTCTCT 4668 Query 88096 ACCGAATTGGTATTCATTATCCGGATAGTCGGCATGGGCTATAACGATAGTTTCTTGCCC 88155 ||||| | ||||| | ||| ||||| ||||||||||| | || ||| ||| || || Sbjct 4669 GCCGAACTCATATTCGTCATCGGGATAATCGGCATGGGCCACAATGATTTTTTTATGTCC 4728 Query 88156 GGTGTTCAACTCAATGATATAGGGCAGACGCTTTACCAGCTCCACCAGCGCCCAAGCTAA 88215 ||||||| ||| || || ||| | || || | | || | | || |||||| Sbjct 4729 TGTGTTCACCTCGATAATCAGGGGTAATTTCTCAGCCCGTTTCAATAATGACCGAGCTAA 4788 Query 88216 TATTTCCTGATCAGTGTCCAGCATGAAG-AACCATTGTCCGCCATTCATTAGCCA---GT 88271 ||||||||| |||| ||||| ||| || ||||| || |||||||| | ||| || Sbjct 4789 TATTTCCTGTTCAGCATCCAG-ATGCAGGAACCACTGACCGCCATTGTAAAACCACAGGT 4847 Query 88272 TATTCACGTTGCCATCTGGACTTAACGCATCAATCATCAGCCGCTCATGGTTCCCCATCA 88331 || | || || | || || |||||| ||| || | ||||||| || ||| | Sbjct 4848 TACT---GTCTCCGTTGTGAAATAGCGCATCTATCGCCATCTGCTCATGATTGCCCCGAA 4904 Query 88332 CTGCCCTGAACCAGGGCATCTGCAATAGTTCCAGACATTCGACATTTTCAGTACCGCGAT 88391 | ||||||||||| || | | || || ||||||||||||||| | || | | Sbjct 4905 CCGCCCTGAACCACGGTTGCGTTATCAGGTCGAGACATTCGACATTTCGATCCCCCCTGT 4964 Query 88392 CGATAAGGTCGCCGACCGATATCAGTAAATC 88422 | || |||||||| || |||||||||||||| Sbjct 4965 CAATCAGGTCGCCTACTGATATCAGTAAATC 4995 >seq11290 Length=3944 Score = 100 bits (110), Expect = 2e-16 Identities = 226/334 (68%), Gaps = 13/334 (4%) Strand=Plus/Plus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||||| || || || || ||||| || || || | || || | |||||| | ||| | Sbjct 628 GCCAACGGGACCGTTGCGGTGCTTGCCAATGATCAGTTCCGCGACGCCCTTGAGCTCGGT 687 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 ||| || ||||| ||||| || || | ||| ||||| ||||| ||||||||||| || Sbjct 688 GTCCTTGTTGTAAACCTCGTCCCGGTAGACAAAAATGATGAGGTCCGCGTCCTGCTCGAT 747 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927 || || || |||| ||| | ||| || || || |||| | || | || ||| Sbjct 748 CGCACCGCTATCGCGTAGATCGGCATTGACTGGCCGCTTGTTGGGCCGGCGCTCCAGCTC 807 Query 96928 TCGATTAAGTTGTGACAATGCCA-CCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986 ||||| || || || | |||| | || | ||| || || ||||| | | |||| | Sbjct 808 GCGATTGAGCTGGGAGAGAGCCATGAAGGGGCAGTTG-AACTCTTTCGCGATCCCCTTGA 866 Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTT----CGGTTATCTTGCAGCTCCGGGACG 97042 | || |||||||||||| |||| |||| | ||| ||||| || | ||| Sbjct 867 GCGATCGAGAAATCTCGCTGATTT----CGTTGACCCTGTTCTCTTG--GC-CTGGGCTA 919 Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGC 97076 ||||| || |||||||| || ||| |||| || Sbjct 920 CGCATGAGCTGCAGGTAATCCGCCATGATCAAGC 953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330841724049832