Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031262.1 Length=54751 Score E Sequences producing significant alignments: (Bits) Value seq10339 251 2e-62 >seq10339 Length=11660 Score = 251 bits (278), Expect = 2e-62 Identities = 1389/2194 (63%), Gaps = 133/2194 (6%) Strand=Plus/Plus Query 39764 AGGTTGACCCGGGCGAGATTCACTCGATGTTGTTGCCGCACCAGCGCGATCTGGTGCGTT 39823 |||| |||| || ||| | || || || || |||||||||| || | |||| | Sbjct 5053 AGGTCGACCAGGCCGACGTCAACCCGCTGCTGAAGCCGCACCAGATCGCTGCGGTGATCT 5112 Query 39824 GGGCGGTC-GCCGGGGGTAGGCGCGCGATCTTCGCGGCGTTCGGCCTGGGCAAGACGGTG 39882 |||| || ||| ||| | ||| ||| | ||| ||| ||||||||||||||||| | Sbjct 5113 GGGCCATCCGCCTGGGCTGCGCG-GCGCTGTTCATGGCCTTCGGCCTGGGCAAGACCTTC 5171 Query 39883 ATGCAGCTGGAGATCGTGCGCCTGTCGCTAGCCAAGCATGGCGGTGGGCGAGGCTTGATC 39942 ||||| |||||||||||||| | || ||| |||| ||| || ||| ||||| Sbjct 5172 GTGCAGTTGGAGATCGTGCGCATCGTGCGTGCC-CGCAT--CGGCGGCATGGGCCTGATC 5228 Query 39943 GTGATGCCGCTGGGCGTGCGGATCGAGTTCGCCCACGACGCCAACATG-CTGGGCATCGA 40001 || || |||||||||||||| |||||| || ||||| | || | || |||||| Sbjct 5229 GTCATCCCGCTGGGCGTGCGTCAGGAGTTCATCCGCGACG-CGGCACGCCTTGGCATCAC 5287 Query 40002 AACCCGGTTTGTTCGCCGCACAGAAGAAGTCGGCGGC---GACGGTATCTACCTCACCAA 40058 | ||| | ||||||| || |||| || || | |||| |||||||||||||| Sbjct 5288 GGTCAAGTTCATCCGCCGCATCGAGGAAGCCGACGACCCGAACGGCATCTACCTCACCAA 5347 Query 40059 CTACGAGAGCGTTCGCGATGGAAAGCTCGACCCGACACTGTTCACGGCCGTCTCACTCGA 40118 |||||| | | ||||| | ||||| |||||| ||||||| | | | || || Sbjct 5348 CTACGAAACGATCCGCGACCGCAAGCTGGACCCGCTGCTGTTCAGCGTGGCCAGCCTGGA 5407 Query 40119 CGAGGCGAGCGTG-CTGCGCTCGTTCGG-GTC--CAAGACGTACCAGTCGTTCCTCGAGC 40174 ||||||| || || |||||| ||||| | | |||||| | || |||| | | || Sbjct 5408 CGAGGCG-GCATGCCTGCGCGGCTTCGGCGGCAGCAAGACCTTCCGCGAGTTCATGGCGC 5466 Query 40175 TGTTCGAC------------------------------------------GGGGTGCCCT 40192 |||||| | || ||||| | Sbjct 5467 TGTTCGCCGGCGACGACCGGCGCGACATGGCCAACCGCGTGAAGAGCGCTGGCGTGCCGT 5526 Query 40193 ACCGGTACGTCGCCACCGCCACGCCATCGCCGAACCGGTACAAGGAGCTGATCCACTAC- 40251 | || | ||| ||||| |||||||| || ||| || |||||| | |||| Sbjct 5527 ATCGCTTCGTGGCCACGGCCACGCCCAGTCCAAACGAGTTTGTCGAGCTGCTGGCCTACA 5586 Query 40252 GCGGGTTATCTCGGGGTGATGGACACCGGTGCGGCGCTCACGCGTTGGTTCCAGCGGGAC 40311 ||| || || || ||||||||| || ||| ||||||| ||| |||| || Sbjct 5587 GCGCCTT-CCTGGGCGTGATGGACGTTGGCCAGGCCAAGACGCGTTTCTTCAAGCGCAAC 5645 Query 40312 -TCGACCAAGGCGAACAACCTCACCCTGTACCCACACAAGGAGCGTGAGTTCTTCTTGTG 40370 ||| ||||| ||||||| || ||| |||| ||||| || |||| |||| Sbjct 5646 AGCGA-GAAGGCCGACAACCTGACGCTGAGCCCAGCGCGCGAGCGCGACTTCTGGCTGTG 5704 Query 40371 GCTCAACACCTGGGCGGCGTTCGTGCAATCCCCGGCAGACCTCGGTCACGACGCCACCGG 40430 | | | |||||| ||||||||| || | |||||||| || || | ||| Sbjct 5705 GGTGGCAAGCTGGGCCCTGTTCGTGCAGAAGCCCTCGGACCTCGGCTACAGCGACGACGG 5764 Query 40431 CTATGACCTGCCGCCGCTGGAGGTGCTGTGGCATGAGGTTGATCCGCCGGCCGATGAGTT 40490 ||| || |||||||| | || | | ||||| ||| | ||| ||| | | | Sbjct 5765 CTACGAGCTGCCGCCCATCGACATCCGCTGGCACGAGAT---CCCGGCGGACCACGCCGA 5821 Query 40491 CGAT--TTCGAGCGT-GACGGGCAGGGCCAGTTGGT---GCGCGGGGTGAACCTCGGGTT 40544 || | | | | | ||||| |||| ||| || | |||| || | |||| | Sbjct 5822 CGCTGGTACCAATATGGACGGCCAGGCGCAGATGTTCAAGCGCCAGG---CCATCGGCGT 5878 Query 40545 ACCGCAAGCTGCGGCCGAGAAGCGCCGGTCGCTGGATGCTCGGCTGTCCAAGCTGACCGA 40604 | | || ||| |||||||||| |||||||| || || ||||| ||| || Sbjct 5879 GGTGGACGCGGCGCGCGAGAAGCGCGACAGCCTGGATGCGCGCGTGGCCAAGATGATGGA 5938 Query 40605 GATCGTCACCGACCACGCCGAACACGGTGAGGGCCAGATTGTGATCTGGTGCGACCTCAA 40664 | | | |||||| || | | ||| |||||||||| |||||| | Sbjct 5939 GCT---------GCGCGCCGAGGACCCGGCCGCCCACCGTGTGATCTGGCACGACCTGGA 5989 Query 40665 CGACGAGCAGCGCGCCATCGAGAAGGCCCTCGAGGACGCTGGGTTGAGCTTCTCATCGGT 40724 || |||| |||||||||||| ||| || |||| || | || | || Sbjct 5990 GGATGAGCGCCGCGCCATCGAGCGCGCCATC-CCGACG---------GCCGC-CAGC-GT 6037 Query 40725 GTACGGGTCACTCGACCCGGA---CGAGGTGGAGCGCCGCCTGTTCGACTGGAAGAACCG 40781 ||||| | | |||||||| |||| |||| || || | | || | | | Sbjct 6038 CTACGGCACCCAGGACCCGGAGACCGAGCGCGAGCCCCTGGTGGTGGCCTTCAGCGATGG 6097 Query 40782 CGACACCTACGCGCTGATCGGCAAACCGGTGATGCTTGGGCAG-GGCATGAACCTGCAGC 40840 | | | | | ||||| | |||| || ||| ||| ||||||| ||| |||||||||| Sbjct 6098 CCTGATCCAGGAGCTGAGCAGCAAGCCCGTGCTGC-TGGGCAGCGGCTGCAACCTGCAGC 6156 Query 40841 AGGCCCACGTCTGTG---TCTACATCGGCGTCACGCACAAGTTCAACGACCTGATCCAGA 40897 | | || ||| | ||||| | ||| || ||||||| |||| | |||||| Sbjct 6157 GGCACTGCGCCTGGGCGATCTACCTGGGCATCGGCTTCAAGTTCGCCGACTTCATCCAGT 6216 Query 40898 GCTTGCACCGGATTCAGCGTTTCGGCCAAACACACC-CTTGCACAGCCCATCTCATCCAT 40956 ||||||| | ||||| ||| || || | || ||| || | | || ||| | Sbjct 6217 CGGTGCACCGCCTCCAGCGCTTCCTGCAGACGCGCCAGGTGCGCA-TCGACCTGATCTAC 6275 Query 40957 TCAGAAACCGAACGGGAAGTGGTTCGCATCATCCGCGA---GAAATGGGCCCAGCACAGA 41013 | || |||| || || ||| ||| | || || |||||||||||||||| Sbjct 6276 ACCGAGGCCGAGCGCGA---GGTGCGCCGGACCCTGGAACGCAAATGGGCCCAGCACAAG 6332 Query 41014 GAGCTGACATCAACTATGACTGACATAATCCACGAATACGGGCTTGAC-CCCGAGGCAAT 41072 |||| || ||||| || || ||| | |||| |||| ||| | | || ||| || Sbjct 6333 GAGCAAGTGGCACGCATGACGGAAATCATCAAGGAATTCGGG-TTGTCGCACGCGGCCAT 6391 Query 41073 --CTCGGAAGCTCTGCAACGGTCCATCGGATGCGAACGAATCGA--AGCATCCGGCGAG- 41127 | || ||| || || |||| || || || |||| || || || | Sbjct 6392 GATCCAGACGCTGAGC--CGCGCCATGGGCGTGGAGCGCGTCGAGGTGCGCGCGCCGGGC 6449 Query 41128 GGCTGGT---TGTTCGCCAACAACGACTGCGTGCCCGAAACCAAGTCCATGG---GCGAC 41181 ||| || || | | |||||||||||||||| ||| || ||||| ||||| Sbjct 6450 GGCGAGTACGTGCTGGTCAACAACGACTGCGTGAACGAGACGCGCCGCATGGCCAGCGAC 6509 Query 41182 AGCTCGGTAGATCTGATTGTCACCAGCATTCCGTTCTCCAACCACTACGAGTACACGCCG 41241 ||| || | ||| | | |||||||| || ||| || || ||||||||| |||| Sbjct 6510 AGC---GTGGGCCTGGTGCTGACCAGCATCCCCTTCAGCACGCAGTACGAGTACTCGCCC 6566 Query 41242 AGCTACAACGACTTCGGCCACACCGACGACAACGCGCATTTCTGGGCGCAGATGGACTAC 41301 | || | ||||||||||||||||||| ||||||||| |||| ||||||||||| | Sbjct 6567 AACTTCGCCGACTTCGGCCACACCGACAGCAACGCGCACTTCTTCCAGCAGATGGACTTC 6626 Query 41302 CTCACGCCGCAGCTGCTGCGCATCCTTGCGCCCGGGCGGATCTACGCCTGCCATGTCAAG 41361 || |||| ||||||||||| | || ||| || || | |||| ||| |||||| Sbjct 6627 CTGGTGCCGGAGCTGCTGCGCGTGCTGATGCCGGGCAGGGTGGCCGCCATCCACGTCAAG 6686 Query 41362 GACCGCATCTTG---TTCGGAAACGTCACCGGCGCAGGCGTTCCCACCGTCTCCCCGTTC 41418 |||||||| || ||| | || |||| ||| | | |||| | ||| ||| Sbjct 6687 AACCGCATCGTGCCCAGCGGCATGGTGGAGGGCGTCGGCTTCCAGACCGAGTACCCCTTC 6746 Query 41419 CACGCCGAGGCGATCTTCCACGGCCGCAAACACGGCTTCGACTACCTCGGCATGATCACC 41478 ||| || | ||| | | |||| ||||||| ||| | | ||| | ||| Sbjct 6747 GACGTGGACACCATCGCCTGCTTCCGCCGGGCCGGCTTCCACTTCGTGGGCCGCAAGACC 6806 Query 41479 GTGGTCACCGATGTGGTGCGGGAAAACAACCAGACGTACCGGCTGGGCTGGTCGGAGCAG 41538 | |||||||| |||||||| || ||||||||||| ||||| ||||||| ||||| Sbjct 6807 ATCGTCACCGACGTGGTGCGCGAGAACAACCAGACCTACCGCCTGGGCTACAGCGAGCAA 6866 Query 41539 TGCAAGGACGCTACGAAGATGGGCGTCGGCTCGCCGGAATACATTCTGTTGTTCCACAGG 41598 |||||||| | || |||||| ||||| | || ||| | ||| | |||| || | Sbjct 6867 TGCAAGGATGGCTCGCGCATGGGCTTCGGCATGTGCGAGTACCTGCTGATCTTCCGCAAG 6926 Query 41599 CCACAGTCAGACCGGTCCAAGGGCTACGCCGACACCCCGGTCACCAAATCCAAGGACGAT 41658 ||| | | ||| | ||||| |||||| || || || ||| ||| Sbjct 6927 GCACCGACCGACGCCAGCCGCGGCTATGCCGACGTGCCCGTGGTGAAGGACAAAACCGAG 6986 Query 41659 TACACTCGGGCCCGCTGGCAGGTCGACGCGCACGCGTTCTGGCGCTCGAGCGGCAACAGG 41718 ||| | ||| | ||||||||| ||||||| |||| | | |||| | ||| || || Sbjct 6987 TACTCGCGGCCGCGCTGGCAGTTCGACGCCCACGGCTACGCGCGCAGCAAGGGCGACCGG 7046 Query 41719 TCACTGACCGCCGACGAGCTCGCCGCGCTGCCACCAGNNNNNNNNNNNNNACTGTTCACC 41778 ||||| | || ||||| | | || | | | |||||| | Sbjct 7047 CTGCTGACGCCAGAGGAGCTGGAAGGCCTCACCCATGCCGACATCTTCAAGCTGTTCCGC 7106 Query 41779 AAGCACAGCCTGCAGGACGTCTACGACTACCAGTCAC-ACGTCCGCATCGGTGAGCAACT 41837 |||||| ||| || ||||||||||| | || ||| |||| |||||||| ||| || Sbjct 7107 AAGCACTCGCTGGAGCGCGTCTACGACTTCGAG-CACGACGTGCGCATCGGCGAGGCGCT 7165 Query 41838 CGAAGGTCGCGGCGCCCTGCCTGCCACGTTCATG 41871 | | |||||| ||||| |||| |||||| Sbjct 7166 GGCCGAGCGCGGCATGCTGCCCACCACCTTCATG 7199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175051968752312