Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13049 158 3e-33 seq7750 132 1e-25 seq10049 131 4e-25 seq12388 116 9e-21 seq11914 91.5 3e-13 seq8226 91.5 3e-13 >seq13049 Length=11502 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| || ||||||||||||||||| |||| || || | Sbjct 10072 GAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCG 10013 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || ||| || || |||||||| | |||||||| | | | ||||||| Sbjct 10012 GCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTC 9953 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || || ||||| |||||| |||| | ||||||||| || ||||| ||||| Sbjct 9952 TTTGTCCTGGATTTTAGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGT 9893 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || ||||| ||||||||||||| |||||| || Sbjct 9892 GATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9851 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| || || ||||| || |||||||||||||| | | || | ||||| Sbjct 7406 GAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATC 7347 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || || |||||||| | |||||||| | | || || || || || Sbjct 7346 TTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTC 7287 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || ||||| ||||| | || | ||||||||| || ||||| ||||| || || Sbjct 7286 CTGGATTTTGGCCTTGACGTTTTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGT 7227 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || ||||| ||||||||||||| |||||| || Sbjct 7226 TTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 7191 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || ||||| || || ||||| |||||||| || | | || | Sbjct 10528 GAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCG 10469 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| ||||||||||| | | ||| || || | | |||||| || Sbjct 10468 GCCATCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTC 10409 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 || || ||||| || |||||| |||| | ||||||||| || ||||| ||||| Sbjct 10408 TTTGTCCTGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGT 10349 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| ||||||||||||| |||||| Sbjct 10348 GATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCAT 10310 Score = 122 bits (134), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| || || ||||| || |||||||||||||| | | || | ||||| Sbjct 10294 GAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATC 10235 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || || |||||||| | |||||||| | | |||||||||||| Sbjct 10234 TTCAAGCTGCTTT--CCAGCAAAGATAAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTG 10177 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || ||||| |||||| |||| | || || || || ||||| | ||||| Sbjct 10176 TCCTGGATTTTGGCTTTGACGTTCTCAATACTATCAGAGGCTTCGACTTCTAAGGTAATT 10117 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||| || |||| |||||| Sbjct 10116 GTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 10082 >seq7750 Length=8304 Score = 132 bits (146), Expect = 1e-25 Identities = 160/216 (74%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || |||||||| || ||||| || ||||||||||| || | | ||| | |||||| Sbjct 1009 GAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGCCCATC 1068 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| ||||||||||| | || ||||| || | | ||||||||||| Sbjct 1069 TTCGAGCTGCTTT--CCGGCGAAGATCAACCGTTGCTGATCTGGAGGAATTCCTTCCTTA 1126 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | |||| || || || |||||||| || Sbjct 1127 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATG 1186 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || ||||| ||||| ||||||| ||||||| Sbjct 1187 GTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 1222 Score = 125 bits (138), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| |||||||||||||| ||||||||||| |||||||| |||| | ||| | || || Sbjct 2724 GAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCGTC 2783 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| ||||||||||| | | ||| ||||| | | ||||||||||| Sbjct 2784 TTCAAGCTGCTTT--CCGGCGAAGATCAAACGCTGTTGGTCTGGGGGAATTCCTTCCTTG 2841 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || || || |||| | |||| || ||||| || || ||||| Sbjct 2842 TCCTGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTACCTCGAGGGTAATG 2901 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||||||||| |||| ||||| Sbjct 2902 GTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 116 bits (128), Expect = 9e-21 Identities = 158/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| || || |||||||| |||| | ||| | || ||| Sbjct 782 AGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTACGACCGTCT 841 Query 151953 TCTAG--GCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 || || ||||| ||||||||||| |||| | ||||| || | | |||||||| || Sbjct 842 TCAAGCTGCTTT--CCGGCGAAGATCAAGCGT-TGCTGATCTGGAGGAATTCCTTCTTTG 898 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | |||| || || || |||||||| || Sbjct 899 TCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTCGACCTCAAGAGTGATG 958 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || ||||| ||||| ||||||| ||||||| Sbjct 959 GTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCATT 994 Score = 104 bits (114), Expect = 5e-17 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || || ||||||||||||| | || | || || || || ||||| | Sbjct 1527 GTGGACTCCTTCTGAATGTTGTAATCGGAGAGTGTACGACCGTCCTCGAGTTGCTTT--C 1584 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| | | |||||| || | || ||||||||||| || || || || | Sbjct 1585 CGGCGAAGATCAAGCGCTGCTGATCTGGCGGAATTCCTTCCTTATCCTGGATCTTGGCCT 1644 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| |||| | |||| || || ||||| ||||| || || || || ||||| | Sbjct 1645 TGACGTTCTCGATAGTGTCGGATGCTTCAACTTCCAGAGTGATTGTCTTTCCGGTGAGGG 1704 Query 152086 TCTTCACGAAGACCTGCATT 152105 |||| ||||||| ||||||| Sbjct 1705 TCTTAACGAAGATCTGCATT 1724 >seq10049 Length=10599 Score = 131 bits (144), Expect = 4e-25 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || || || ||||| |||| | ||| | || || Sbjct 9186 GAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTC 9245 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| ||||||||||| | | ||||||||| | || |||||||||||| Sbjct 9246 TTCAAGCTGCTTT--CCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTG 9303 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || ||||| |||| | ||| || || || ||||| ||||| || Sbjct 9304 TCCTGGATCTTGGCCTTGACGTTCTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATG 9363 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || ||||| ||||||||||||| |||||| || Sbjct 9364 GTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9401 >seq12388 Length=21549 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| || || ||||| || || || ||||| || | || || | |||||||| Sbjct 15489 ACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCA 15430 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || ||||||||||||||||| | |||||||| | | ||||||||||| ||||| Sbjct 15429 AGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGG 15370 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 ||||| ||||| | || | || || || || ||||| || || || ||||| Sbjct 15369 ATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTA 15310 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| ||||| || |||| |||||| || Sbjct 15309 CCAGTGAGGGTCTTTACAAAGATCTGCATGTT 15278 Score = 105 bits (116), Expect = 2e-17 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | |||||||| || || || || || |||||||| | | || | Sbjct 16008 GAGACGGAGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGGGTGCG 15949 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 |||||||| || ||||| ||||||||||| || | ||| || || | | |||||| Sbjct 15948 GCCATCTTCAAGCTGCTTT--CCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCC 15891 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || ||||| |||||| |||| | ||||||||| || ||||| || Sbjct 15890 TCCTTGTCCTGGATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGG 15831 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || | ||||| || || | ||||| Sbjct 15830 GTGATCGTTTTACCAGTCAACGTCTTGACAAAAATTTGCAT 15790 >seq11914 Length=36757 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | ||||||||| | | |||||||||||| || || || || Sbjct 2907 TTACCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTGTCCTGGATCTTG 2966 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||| |||| | | |||| ||| ||| || || || || || || || ||||| Sbjct 2967 GCCTTCACATTCTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATTGTCTTACCCGTT 3026 Query 152082 AGAGTCTTCACGAAGACCTGCATTTTACCCTT 152113 || || || ||||| | ||||| |||||||| Sbjct 3027 AGGGTTTTGACGAATATCTGCA--TTACCCTT 3056 >seq8226 Length=1064 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| || || ||||| || || || |||||||| | | || | ||||| Sbjct 800 GAGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATC 859 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | ||| ||||||||||| | | ||||||||| | | || || ||||| || Sbjct 860 TTCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 919 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || ||||| | || | ||| || || || ||||| ||||| || || Sbjct 920 CTGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATTGT 979 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || | ||||| || |||| ||||| Sbjct 980 TTTACCAGTCAACGTCTTGACAAAGATTTGCAT 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153610107995092