Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2527 149 7e-31 >seq2527 Length=10055 Score = 149 bits (164), Expect = 7e-31 Identities = 397/602 (66%), Gaps = 6/602 (1%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||| ||||||||||||| |||| | | | || ||||| || | | || Sbjct 5732 ATCAGCAACATATTCAATATATTGCGACATGAGTCGACAATTCATACCAATCATATCCAC 5673 Query 23403 TGGAATCGCATCATATAAGAATAGT--TTTTCAATGGAAACAGCATCTTTAATTATTTGA 23460 ||||| || || || ||| | | ||| || |||||| || || |||| | Sbjct 5672 TGGAAGAGCTTCGGTTAG--ATACTCCTGTTCGATTTGAACAGCTTCACGTATAATTTCA 5615 Query 23461 -ACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 ||| | || |||| | ||| | || | |||||| ||| ||||| |||||||| Sbjct 5614 CACACTTGCT-CTTCTGTTGGTTTTTGTTCGAGATACTTGTACACCAAACACGCAAAATC 5556 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 | ||| || |||||||| || ||| || || ||| ||| || || ||||| | Sbjct 5555 TCGATGGAGTCCTTCATCTCTTGAAATTAACTCGTTACTGTGTGTCAAACCCGGCATAAG 5496 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 ||| ||||| || | |||||| ||||||||||| || || || || || || || || || Sbjct 5495 TCCACGTTTCTTCAGCCAAAAAATTGCAGCAAACGAGCCAGAGAAAAAGATTCCTTCCAC 5436 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 || ||||| || |||| ||| | ||||||| ||||| | || |||||||| | Sbjct 5435 TGCAGCAAATGCAACAACACGCATCCCAAATGAAGCATTCTTATTTTCAATCCATTGAAT 5376 Query 23700 tGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 |||||||| || ||| ||||| | || || | |||||| || ||||| | | Sbjct 5375 TGTCCAATCTGCTTTCTTTTTTATATACGGAAAGTCGTGAATTGCGTTGAAGAGTGTATT 5316 Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAAT 23819 || ||| | ||| | || || || || || | | |||||||||||| ||||| Sbjct 5315 TTGTTCGACTGGATCGTTAATGTACGTTTCGATCAATTTCGAATACATTTCAGAGTGAAT 5256 Query 23820 ATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATT 23879 ||| | ||||||||||| || ||| | || |||| || | || || | Sbjct 5255 TCCTTCCACTGCAATCTGAAAATTGTAGAAAGAGAGTGCCTCAGGCATCTTCACTTCTTG 5196 Query 23880 AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAG 23939 ||| | | | | |||||| || || || ||||| ||| ||||| || ||||| Sbjct 5195 TGTAAAACGTCCAATGAGATTTTCATTTACGATTCCATCTGAAGCTGCAAAAAATGCAAG 5136 Query 23940 AA 23941 || Sbjct 5135 AA 5134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521395096912800