Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7750 145 5e-30 seq10049 118 8e-22 seq13049 116 3e-21 seq12388 93.3 3e-14 seq8226 87.8 1e-12 seq3937 82.4 5e-11 >seq7750 Length=8304 Score = 145 bits (160), Expect = 5e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || |||| || | ||| |||||| || ||||||||||| Sbjct 1493 CATTCCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATC 1552 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || |||| || |||| || || ||||| ||||| |||||||| ||||||||||||| Sbjct 1553 GGAGAGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGG 1612 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| || | | |||| | || ||||||| | || Sbjct 1613 CGGAATTCCTTCCTTATCCTGGATCTT-GGCCTTGACGTTCTCGATAGTGTCGGATGCTT 1671 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| || || |||||||| ||||||||||| |||||||| ||||| Sbjct 1672 CAACTTCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 1723 Score = 145 bits (160), Expect = 5e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | | || || ||||| || ||| ||||| |||||||| || Sbjct 2706 CATTCCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTC 2765 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| || |||| || |||||||| ||||| |||||||||||||| || |||| Sbjct 2766 GGAGAGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGG 2825 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| || | || |||| | || ||||| | || || Sbjct 2826 GGGAATTCCTTCCTTGTCCTGGATCTT-GGCCTTAACGTTCTCGATTGTGTCAGAGGCTT 2884 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | ||||| |||||||| || || |||||||| ||||||||||| Sbjct 2885 CTACCTCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | ||| | | || || ||||| || |||||| ||||||||||| || Sbjct 991 CATTCCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 1050 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || || |||||||| ||||| |||||||| || |||||||||| Sbjct 1051 AGAAAGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGG 1110 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| ||||| ||| | || | || ||||||| | ||| Sbjct 1111 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATTGTGTCGGACGCTTC 1170 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 1171 GACCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 1221 Score = 107 bits (118), Expect = 1e-18 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||||||||||||||| || |||| ||| | |||||||| || ||||| || Sbjct 2123 CCAGCAAAGATCAAACGCTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGGATCTT-GGC 2181 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | || |||| | |||||||||| | ||| ||||| | || || |||||||| || || Sbjct 2182 CTTAACGTTCTCGATGGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTTCCAGTAAG 2241 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 |||||||||||||||||||| Sbjct 2242 AGTCTTCACGAAGATTTGCAT 2262 Score = 104 bits (114), Expect = 2e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||||||||||||||| || ||||||| ||| | |||||||| ||| ||||| || Sbjct 2397 CCGGCAAAGATCAAACGTTGTTGATCTGGAGGAATTCCTTCCTTGTCCTGGATCTT-GGC 2455 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | || |||| | ||||| || | | ||| || |||| || ||||| ||||| ||||| Sbjct 2456 CTTAACGTTCTCAATGGTATCTGAAGCTTCGACTTCCAGTGTGATCGTTTTTCCGGTGAG 2515 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| ||||| Sbjct 2516 AGTCTTGACGAAGATCTGCAT 2536 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| |||||||||||||||||||| ||||| | || | |||||||| || ||||| Sbjct 3067 CTTACCGGCAAAGATCAAACGCTGTTGATCAGGGGGGATTCCTTCCTTGTCTTGAATCTT 3126 Query 44254 CTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 ||| | || | || ||||||| | ||| ||||| | || || ||||| || || Sbjct 3127 GGCCTTGACATTTTCGATAGTGTCGGAAGCTTCGACCTCAAGAGTGATGGTCTTACCAGT 3186 Query 44314 GAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || |||||||| ||||| Sbjct 3187 CAGGGTTTTGACGAAGATCTGCAT 3210 >seq10049 Length=10599 Score = 118 bits (130), Expect = 8e-22 Identities = 156/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| || || ||||| |||| || || |||| || Sbjct 9190 ACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCGTCTTCA 9249 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| |||||||| |||| || | |||||||| ||| Sbjct 9250 AGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGGGATTCCTTCCTTGTCCTGG 9309 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | ||| | || | || ||| || || | || || || || Sbjct 9310 ATCTTGGCCTTGAC-GTTCTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATGGTTTT 9368 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || |||||||||||||||||||| |||||| || Sbjct 9369 ACCAGTGAGGGTCTTCACGAAGATCTGCATGTTG 9402 >seq13049 Length=11502 Score = 116 bits (128), Expect = 3e-21 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| |||||| || || |||||||||||||| |||| | || || || |||| || Sbjct 10062 ACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGACAAGGTGCGGC-CGTCTTC 10004 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || || |||||||| | ||| ||||| |||| ||| ||||| || ||| Sbjct 10003 AAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGGGTTCCTTCTTTGTCCTG 9944 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 || || |||| | |||| | ||| |||| | || ||| || || | || ||||| | Sbjct 9943 GATTTTA-GCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTT 9885 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 | || |||||||||||||||||||| |||||| || Sbjct 9884 TACCAGTGAGGGTCTTCACGAAGATCTGCATGTTG 9850 Score = 113 bits (124), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||| |||||||| || | || ||| | || || Sbjct 10518 ACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGACAGGGTGCGGCCATCCTCA 10459 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||| |||||||| ||||| ||||| | ||| | || || || ||| Sbjct 10458 AGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGGGATTCCCTCTTTGTCCTGA 10399 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | ||| |||| | || ||| || || | || ||||| || Sbjct 10398 ATCTTG-GCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTT 10340 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||||||||||||||| |||||| Sbjct 10339 ACCAGTGAGGGTCTTCACGAAGATCTGCATG 10309 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | ||| ||| | || || || || || || ||||| Sbjct 7385 CTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAA 7326 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| |||| ||| | || || || ||| || || ||| | | Sbjct 7325 GATAAGACGTTGCTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATTTTGGCCTTGACGTT 7266 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||| |||| | || ||| || || | || ||||| || || |||||||||||||| Sbjct 7265 TTCAATGCTGTCTGAGGCTTCGACTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCAC 7206 Query 44326 GAAGATTTGCATGATG 44341 |||||| |||||| || Sbjct 7205 GAAGATCTGCATGTTG 7190 Score = 109 bits (120), Expect = 4e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | ||| ||| | || || |||||||| || ||||| Sbjct 10273 CTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAA 10214 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| |||| || | |||||||| ||| || || |||| | || Sbjct 10213 GATAAGACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGAT-TTTGGCTTTGACGT 10155 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || | || | || ||| || || | ||||| ||||| || || |||||||| | Sbjct 10154 TCTCAATACTATCAGAGGCTTCGACTTCTAAGGTAATTGTCTTGCCAGTAAGGGTCTTGA 10095 Query 44325 CGAAGATTTGCATG 44338 | ||||| |||||| Sbjct 10094 CAAAGATCTGCATG 10081 >seq12388 Length=21549 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || ||||| || | || ||| | || || |||||||||||||| || Sbjct 15472 CTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCAAGCTGCTTCCCGGCGAA 15413 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| |||| ||| | |||||||| || || || ||| | | Sbjct 15412 GATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATTTTGGCCTTGACGTT 15353 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || | || | || ||| || || | || ||||| || || ||||||||||| || Sbjct 15352 TTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTTACCAGTGAGGGTCTTTAC 15293 Query 44326 GAAGATTTGCATGATG 44341 ||||| |||||| || Sbjct 15292 AAAGATCTGCATGTTG 15277 >seq8226 Length=1064 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| || || |||||||| | || ||| | || |||| ||| || ||||| || Sbjct 821 CTCCTTCTGAATATTGTAATCAGAAAGGGTGCGGCCATCTTCCAACTGTTTTCCGGCGAA 880 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| |||||||| |||| || | || ||||| ||| ||||| ||| | | Sbjct 881 GATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTT 940 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||| | || | || ||| || || | || || || || || || | ||||| || Sbjct 941 TTCAATGCTATCAGAGGCTTCGACTTCGAGAGTGATTGTTTTACCAGTCAACGTCTTGAC 1000 Query 44326 GAAGATTTGCATG 44338 |||||||||||| Sbjct 1001 AAAGATTTGCATG 1013 >seq3937 Length=20801 Score = 82.4 bits (90), Expect = 5e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 |||||||||||||| || |||||||||| || | |||||||| || ||||| | Sbjct 18853 CCGGCAAAGATCAAGCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGGATCTTAGCC 18912 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 || | || | |||||||||| || || ||||| | ||||| |||| || || | Sbjct 18913 TTGACATTTTCGATGGTGTCGGAGGCCTCAACCTCAAGGGTAATGGTCTCACCAGTCAAA 18972 Query 44318 GTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| | ||| Sbjct 18973 GTCTTGACGAAGATCTACAT 18992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359927871017484