Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20monticolum_20[genbank_20GCA_5F000505645.1_202013-12- 12] 14,252 sequences; 89,158,954 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq7750 116 3e-21 seq13049 107 2e-18 seq12388 107 2e-18 seq10049 105 6e-18 seq8226 105 6e-18 >seq7750 Length=8304 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| ||| ||||||||||||||| || |||||| Sbjct 1497 CCTCCACGGAGACGCAGAACCAAATGCAAGGTGGACTCCTTCTGAATGTTGTAATCGGAG 1556 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| ||||| ||||| |||||||| |||| |||||| || || | ||| Sbjct 1557 AGTGTACGACCGTCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCTGGCGGA 1616 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | ||||| ||| ||| || ||| | | | ||||||| | || || Sbjct 1617 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATAGTGTCGGATGCTTCAACT 1676 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || ||||| ||||| |||||||| Sbjct 1677 TCCAGAGTGATTGTCTTTCCGGTGAGGGTCTTAACGAAGATCTGCAT 1723 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||||||||| ||||||||| Sbjct 767 CCACCACGAAGACGAAGAACGAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAG 826 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| |||||||| |||| ||| || || || | ||| Sbjct 827 AGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGAGGA 886 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | || |||||| ||| || ||| || || | |||||| || || | Sbjct 887 ATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCG--ATTGTGTCGGACGCTTCGA 944 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || || || ||||| ||||| |||||||| Sbjct 945 CCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 993 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || ||||| || || ||| || |||||||| ||||||||| Sbjct 2710 CCACCGCGCAGACGGAGAACAAGATGAAGAGTTGACTCTTTTTGAATGTTGTAGTCGGAG 2769 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| |||||||| |||| ||||||||||| | |||| Sbjct 2770 AGAGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCTGGGGGA 2829 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| || | || || | |||| | | ||||| | || || Sbjct 2830 ATTCCTTCCTTGTCC-TGGATCTTGGCCTTAACGTTCTCGATTGTGTCAGAGGCTTCTAC 2888 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| || || || ||||| Sbjct 2889 CTCGAGGGTAATGGTCTTTCCAGTAAGAGTCTTCACAAAGATTTGCAT 2936 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||| ||||| ||||| || Sbjct 995 CCTCCACGCAGCCGGAGAACGAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 1054 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || ||||||||||| |||||||| |||| || || || || | ||| Sbjct 1055 AGAGTGCGCCCATCTTCGAGCTGCTTTCCGGCGAAGATCAACCGTTGCTGATCTGGAGGA 1114 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||| ||| ||| || ||| || || | |||||| || || | Sbjct 1115 ATTCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCG--ATTGTGTCGGACGCTTCGA 1172 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || || || ||||| ||||| |||||||| Sbjct 1173 CCTCAAGAGTGATGGTTTTTCCGGTGAGTGTCTTGACGAAGATCTGCAT 1221 >seq13049 Length=11502 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||| ||||| || || ||| Sbjct 7420 CCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGAG 7361 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || || ||||| || || || || || || ||||| | ||| Sbjct 7360 AGGGTGCGGCCATCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGGA 7301 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814 | || ||| |||||| |||||| ||| | || || | |||| | || || Sbjct 7300 ATGCCCTCTTTGTCCTGGATTTTGGCCTTGA-CGTTTTCAATGCTGTCTGAGGCTTCGAC 7242 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || | || ||||||||||| || || ||||| ||||| ||||||||||| Sbjct 7241 TTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 7191 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||||| || ||||| || ||||| ||||| || Sbjct 10537 GCCACCACGGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGTATGTTGTAGTCAGA 10478 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || || || || |||||||| |||| |||||||| || | || Sbjct 10477 CAGGGTGCGGCCATCCTCAAGTTGTTTTCCGGCGAAGATCAATCGCTGTTGATCGGGAGG 10418 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | | ||| |||||| ||| | || |||| ||| || | |||| | || | Sbjct 10417 GATTCCCTCTTTGTCC-TGAATCTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGA 10359 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || ||||||||||| || || ||||| ||||| ||||||||| Sbjct 10358 CTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATG 10309 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||| ||||| || || || Sbjct 10309 GCCACCACGAAGACGGAGAACGAGATGGAGTGTTGACTCCTTCTGGATGTTGTAATCAGA 10250 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||| || || || || || || || ||||| | ||| Sbjct 10249 GAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAGATAAGACGTTGCTGGTCTGGGGG 10190 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 | | ||||||||| |||||| Sbjct 10189 GATTCCTTCCTTGTCCTGGATTTT 10166 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || || || || || ||||| |||||||| Sbjct 10081 GCCACCACGGAGACGGAGGACCAAGTGAAGAGTCGATTCTTTTTGGATGTTGTAGTCGGA 10022 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| |||| || || || ||||| || || || || || || ||||| | || Sbjct 10021 CAAGGTGCGGCCGTCTTCAAGTTGTTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGAGG 9962 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | || |||||| |||||| |||| ||| || | |||| | || | Sbjct 9961 GGTTCCTTCTTTGTCCTGGATTTTA-GCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGA 9903 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | || | || ||||||||||| || || ||||| ||||| ||||||||||| Sbjct 9902 CTTCGAGAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9851 >seq12388 Length=21549 Score = 107 bits (118), Expect = 2e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 41639 CCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGG 41698 || || ||||| | |||| || || || ||||||||||| || || || || ||| Sbjct 16013 CCACGGAGACGGAGAACCAAGTGAAGAGTCGATTCCTTCTGAATATTGTAATCAGACAGG 15954 Query 41699 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACG 41758 ||||| | || || |||||||| |||||||| || || |||||||| || | || | Sbjct 15953 GTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATT 15894 Query 41759 CTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTC 41817 | |||||||||| || |||| |||| ||| || | |||| | || || || Sbjct 15893 CCCTCCTTGTCC-TGGATTTTGGCTTTGACGTTCTCAATGCTGTCTGAGGCTTCGACTTC 15835 Query 41818 CACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||||||||| |||| |||||| || ||||| |||||| Sbjct 15834 GAGGGTGATCGTTTTACCAGTCAACGTCTTGACAAAAATTTGCATG 15789 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || |||||||||||| || ||||| || |||||||| | || || Sbjct 15489 ACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAGGGTGCGGCCATCTTCA 15430 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| |||||||| || || || || ||||| | |||| | ||||||| | || Sbjct 15429 AGCTGCTTCCCGGCGAAGATAAGACGTTGCTGGTCTGGAGGAATTCCTTCCTTGT-CTTG 15371 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 |||| || | ||| | | | | || | || || || | || |||||||| Sbjct 15370 GATTTTGGCCTTGACGTTTTCAATACTATCAGAGGCTTCGACTTCTAGGGTGATCGTTTT 15311 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| || || |||||||| || ||||||||||| Sbjct 15310 ACCAGTGAGGGTCTTTACAAAGATCTGCATGTT 15278 >seq10049 Length=10599 Score = 105 bits (116), Expect = 6e-18 Identities = 168/236 (71%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || || |||||||||||| || |||||||| Sbjct 9171 GCCACCACGAAGACGGAGAACGAGGTGGAGGGTTGACTCCTTCTGAATATTGTAGTCGGA 9230 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753 || || || |||| || |||||||| |||||||| |||| ||||| ||||| |||| Sbjct 9231 AAGAGTACGACCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGCGG 9290 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACAGTG---TCGCTCGAC 41809 || || ||||||||| ||| || ||| |||| | || || || | Sbjct 9291 GATTCCT-TCCTTGTCCTGGATCTTGGCCTT----GACGTTCTCAATGCTATCAGAGGCT 9345 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || | || || |||||||| || || ||||| ||||| ||||||||||| Sbjct 9346 TCGACTTCGAGAGTGATGGTTTTACCAGTGAGGGTCTTCACGAAGATCTGCATGTT 9401 >seq8226 Length=1064 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || |||||||||||| || || || || Sbjct 785 GCCACCACGAAGACGGAGAACGAGATGGAGGGTTGACTCCTTCTGAATATTGTAATCAGA 844 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || | ||| || |||||||| |||| ||||| ||||| | ||| Sbjct 845 AAGGGTGCGGCCATCTTCCAACTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 904 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 || || |||||||||| ||| | || || | ||| || | | || | || | Sbjct 905 AATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTTTCAATGCTATCAGAGGCTTCGA 963 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || |||||||| |||| |||||| || || || |||||| Sbjct 964 CTTCGAGAGTGATTGTTTTACCAGTCAACGTCTTGACAAAGATTTGCATG 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462221640542400