Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq2606 450 3e-122 seq2595 410 2e-110 seq2573 127 4e-25 seq2600 118 2e-22 seq2689 89.7 1e-13 >seq2606 Length=3143 Score = 450 bits (498), Expect = 3e-122 Identities = 1130/1706 (66%), Gaps = 55/1706 (3%) Strand=Plus/Plus Query 14216 GAAATAAATGACGGTACGCGTGTTATTTCCACGGTCGCAACCGCAATCGTCGGCATGGTC 14275 ||||| || || ||||| ||| || | || || ||||| ||||| || ||||| Sbjct 248 GAAATTAACGAAGGTACTCGTACCATCACTACCGTTAGCACCGCTATCGTAGGTATGGTT 307 Query 14276 TGGACAGCCAGCGATGCGGATGCCGAGACATTTCCCCTCAACGAGCCGGTACTGATTACC 14335 || || || || || || | | |||||||| | || || || |||||||| Sbjct 308 TGTACTGCTCCTGACGCAGACGAAAAAACATTTCCATTAAATACTCCAGTCCTGATTACT 367 Query 14336 AATGTGCAGAGCGCCATTGCGAAAGCCGGTAAAAAAGGCACTCTGTCAGCTTCCCTGCAG 14395 | || |||||||| || || ||||| ||||||||||| |||| | || ||| | Sbjct 368 GACGTTATGAGCGCCAGTGGCAAGGCCGGGGAAAAAGGCACTTTGTCTACATCTCTGAAA 427 Query 14396 GCCATCGCCGACCAGTCAAAGCCTGTCACCGTTGTCGTGCGCGTTGCCGAAGGTACCGGA 14455 |||||||| | ||| | |||||| || || || || || || | ||||| | Sbjct 428 GCCATCGCTGCTCAGGCTCTGCCTGTGACTGTGGTTGTTCGTGTGGAAGAAGGCA----- 482 Query 14456 GACGATGCAGAAGCGCAGACCACGTCCAACATTATCGGCGGC---ACGGATGAGAACGGT 14512 | || ||||| | |||| ||||| ||||| || || ||||| ||| Sbjct 483 -AATCTGAAGAAG---AAACCATTAGTAACATCATCGGTGGTGTTACCGATGAA---GGT 535 Query 14513 AAATACACCGGTATCAAGGCGCTGCTAACTGC-CGAAGCGGTCACCGGCGTTAAGCCGCG 14571 || | |||||||| |||||||| | | || | |||| | | || ||||| || || Sbjct 536 AAGAAAACCGGTATGCAGGCGCTGTTGGCGGCACAAAGCCAGCTC-GGTGTTAAACCACG 594 Query 14572 CATTCTCGGTGTGCCGGGTCTCGATACGCAGGAAGTCGCAACCGCACTTGCATCGGTCTG 14631 |||||| ||||| || ||||| || | | ||| || | | ||| || || | | Sbjct 595 CATTCTGGGTGTTCCAGGTCTGGACTCAAAACCAGTTGCTGCTGAACTCGC--CGCTATT 652 Query 14632 TATCAGC--CTGCGTGCGTTTGGTTACGTCAGCGCATGGGGCTGTAAGACCATTTCCGAG 14689 | ||| ||| || | | || |||||||| | ||||| || | || || || Sbjct 653 GCTAAGCAACTGAAAGCAATGGCATATGTCAGCGCTTATGGCTGCAAAAATATCTCTGAA 712 Query 14690 GCGATGGCATATCGCGAGAATTTCAGCCAGCGCGAGCTGATGGTCATCTGGCCTGATTTC 14749 | || |||||| || || ||| | ||||| ||| | ||| | || |||||||||||| Sbjct 713 GTTATCAAATATCGTGAAAACTTCGGTCAGCGTGAGGTAATGTTAATTTGGCCTGATTTC 772 Query 14750 CTCGCATGGGATACCACCGCGAACGCCACCGNNNNNNNNNNNNNNNNNNNNNNNGCACTC 14809 || |||| | | | | ||| | | || ||||| Sbjct 773 CTGAGATGGAACA--AAGGTGAA-GTTATCGCACCTGCGACGGCTTAT------GCACTG 823 Query 14810 GGTCTGCGTGCCTACATCGACCAGACTATCGGCTGGCACAAAACGCTGTCTAACGTTGGC 14869 || |||||||| | |||||| | | ||||||||||||||| || || || || || Sbjct 824 GGCTTGCGTGCCAAAATCGACGAAGAAACCGGCTGGCACAAAACCCTATCCAATGTGGGT 883 Query 14870 GTGCAGGGCGTTACCGGCATCAGCGCCTCA-GTCTTTTGGGATTTGCAGGCATCCGGCAC 14928 || | ||||| || || | | | || | ||||| |||||| |||| || | || || Sbjct 884 GTTAACGGCGTAACGGGTCT-ATCTGCTGATGTCTTCTGGGATCTGCAAGCGACTGGAAC 942 Query 14929 AGATGCTGACCTGCTCAACGAGGCCGGAGTCACCACGCTGGTGCGCAAGGATGGTTTCCG 14988 || ||||| ||||| ||| || |||| || ||| | ||||| | ||||| || Sbjct 943 TGAGGCTGATCTGCTGAACCAGAATCACATCACAACACTGATCCGCAAAAACGGTTTTCG 1002 Query 14989 TTTTTGGGGGAACCGCACATGC------------TCTGATGACCCGCTTTTCCTGTTTGA 15036 ||| ||||| ||||| ||| ||||| ||| | || |||| || || Sbjct 1003 TTTCTGGGGTTCACGCACTTGCGCTGGCTCTGCTTCTGAGGACTCACTGTTCCCATTCGA 1062 Query 15037 GAACTACACCCGAACCGCGCAGGTGCTGGCCGACACAATGGCTGAGGCGCACATGTGGGC 15096 | ||||||||| ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 1063 AAGCTACACCCGTACCGCTCAGGTACTGGCTGACACCATGGCTGACGCGCATATGTGGGC 1122 Query 15097 GGTCGATAAGCCCATCACCGCATCGCTCATCCGTGACATTGTCGACGGCATTAACGCCAA 15156 |||| || || | ||| ||||||| | || |||||| |||| ||||| || || || Sbjct 1123 AATCGACAAACCGCTGACCCCATCGCTGGTACGCGACATTATCGAAGGCATCAATGCTAA 1182 Query 15157 ATTCCGCGAGCTGAAATCAAATGGCTACATCGTGGACGGTGAATGCTGGTTCGACGAGGA 15216 ||||| || |||||| | ||||||||| | |||||| ||||||| ||||| | Sbjct 1183 GTTCCGTGAACTGAAAGCGGGCGGCTACATCATTGACGGTCGTTGCTGGTATGACGACAA 1242 Query 15217 ATCGAACGATAAGGAAACCCTCAAGGCCGGGAAACTGTATATCGACTACGACTATACACC 15276 | |||||||| || ||||| || || || |||||| ||||| ||||||||||| || Sbjct 1243 AATCAACGATAAAGACACCCTGAAAGCAGGCAAACTGACCATCGATTACGACTATACCCC 1302 Query 15277 GGTTCCCCCACTGGAAAGCCTGACCCTGCGCCAGCGTATCACCGATAAATATCTGGTGAA 15336 || || |||||||||| | ||| | |||||||| || || |||| || ||| || | Sbjct 1303 TGTACCGCCACTGGAAAACATGATGTTACGCCAGCGCATTACAGATAGTTACCTGATGGA 1362 Query 15337 TCTGGCTGAATCGGTCAACAGCTAAGGAGCCTGAAACAACATGGCACTACCCCGCAAACT 15396 | | || || |||| | ||||| || ||| |||||| |||| |||||||| Sbjct 1363 TTTCGCAAAAAGTATCAATAAATAAGGGGC---TAAC-TGATGGCATTACCTCGCAAACT 1418 Query 15397 TAAATATCTGAACATGTTCAATGACGGCCTTAGCTACATGGGCGTTGTTGAATCCGTGAC 15456 |||||||||||| ||||||| || ||| | ||| |||| |||| ||| |||| Sbjct 1419 TAAATATCTGAATTTGTTCAACGATGGCAACAACTATCAGGGCATTGTCGAAGAGCTGAC 1478 Query 15457 GCTGCCGAAGCTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTATGAATGGCGCTGC 15516 || || ||||||| |||||| || ||| ||| || || | |||||||| ||| || Sbjct 1479 TCTTCCTAAGCTGAGCCGCAAACTGGAAGCCTACCGTGGTGCTGGTATGAACGGCAGCGC 1538 Query 15517 AGCGATTGACCTCGGCCTCGACGATGATGCGCTTACTGTCGAATGGTCTGTCGGTGGCCT 15576 | | | || || || || || || | || | || |||| || | || || | Sbjct 1539 AATGGTGGATCTGGGTCTGGATGAAGGCGCATTGGATGCGGAATTCACTCTGGGCGGTAT 1598 Query 15577 GCCTGATGTGGC-GCTGTGGGCGCAGT-ATGCCGCGCCGGGGGCTGATGCCGTGCCGCTG 15634 ||| || | |||| |||| || ||| || | |||| || |||| Sbjct 1599 ---TGA-GTCCCAACTGTACAAACAGTGGGGCATCGCTCAGGTC-GATGGTGTCATGCTG 1653 Query 15635 CGTTTTGCTGGCTCTTACCAGCGTGACGACACTGGCGAAATCGTTGCGGTCGAGGTGGTC 15694 || ||||| ||||||| | || || ||||| || || | ||||| || || || || Sbjct 1654 CGCTTTGCAGGCTCTTTTGAACGCGAAGACACAGGTGATGTGGTTGCAGTTGAAGTTGTT 1713 Query 15695 ATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAAAATAAGCAGGGTGAAAATACCTCG 15754 |||||||||||| | | ||| | || ||| ||||||||||||| || || Sbjct 1714 ATGCGTGGCCGTTTTCAGGAATTTGATCACGGTACTTATAAGCAGGGTGATAACACTCAA 1773 Query 15755 ACCAAACTGTCGACCGTTTGCACCTATTACCGCCTCACGATTGATGGTAGCGACATTATC 15814 |||||| | | | ||| || | | || || ||||| || | || Sbjct 1774 ACCAAAATTACCGCGAAAAACACTTACTTCAAACTGACCTGGGATGGCGAAGAACTGATT 1833 Query 15815 GAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTCGACCGTCTGGAACAGCAC 15874 ||||||||||||||||||||||| ||||| ||| ||| | || ||||||| |||||| Sbjct 1834 GAAATCGACACCGTCAACATGGTTGAGAAAGTGGGCGGAGAAGATCGTCTGGCACAGCAT 1893 Query 15875 CGCCGCGCAATCGGGCTGCTGTAATT 15900 || || || || || ||| | ||||| Sbjct 1894 CGTCGTGCTATTGGTCTGTTTTAATT 1919 >seq2595 Length=21780 Score = 410 bits (454), Expect = 2e-110 Identities = 1079/1633 (66%), Gaps = 34/1633 (2%) Strand=Plus/Plus Query 10446 GCGACATTCTGCTGACGCCGGTCGGCTCGCGGGTGATGCGTCGTGAATATGGCTCGCTCC 10505 |||| ||| | ||||| || || ||| || | ||| ||| || || || || | Sbjct 18773 GCGATATTTTACTGACTCCAGTAGGCAGCCGTATTGCGCGCCGTACTTACGGATCACTAC 18832 Query 10506 TGTCTGCGCTGATTGATATGCCGCAAAACCCGGCGCTCAGGCTGCAAATCATGGTGGCGT 10565 || ||| |||||||| |||||| || |||||| ||||||| || | |||| |||| Sbjct 18833 TGCCTGAACTGATTGACTGGCCGCAGAATCCGGCGATCAGGCTTCAGGTGATGGCGGCGA 18892 Query 10566 GCTATTCGGCCATCCAGAAGT-GGGAGCCGCGTATCAGGCTTACATCCATCAGCTTTGAG 10624 ||| | | || ||| || || |||||||||| | | ||| |||||||||| | || Sbjct 18893 GCTTTACCGCAATC-AGTCGTTGGGAGCCGCGAGTGACGCTGACATCCATCACGATGGAA 18951 Query 10625 ACTGGTGATGCTGGCGAGATGTATGTCGATATTACCGGGATGCGTACCGATACGGGTGCG 10684 || | | ||| ||| || ||||| || || | | | | | | | Sbjct 18952 ACCCTACAGGACGGCAGAATGGTGGTGGATATCACGGGTACTTATCACCAGTCCGCTAAA 19011 Query 10685 TCAGTTTCAACCACTGTTTCACTGAGTTAAATCACTATGGCAACTGTTGACCTGAGCCTG 10744 | ||||| | || | |||| ||| | ||| |||| | || | |||| | Sbjct 19012 GAATTTTCACTTTCGATTCCGGTGAGGTAAG---CAATGCCAACAATCGATTTAAGCCAG 19068 Query 10745 TTACCCGTTCCCGATGTGGTTGAGGAACTGGATTTTGAAACCATCCTTGCGGAACGCATT 10804 ||||| || |||||||||||| |||||||| ||| | | | || || | Sbjct 19069 TTACCACCACCGGATGTGGTTGAGCCACTGGATTACGAACAACTGTTAGAAGAGCGTAAA 19128 Query 10805 GCGACG-CTAATTTCGCTATACCCCGAAGACCAGCAGGAAGCTGTAGCCCGGACGCTCGC 10863 ||| | || |||||||| || || | ||| |||||||| ||||| ||||| || | Sbjct 19129 -CGAGGTCTGATTTCGCTTTATCCGGCAGATCAGCAGGATGCTGTTGCCCGAACATTGCA 19187 Query 10864 ACTTGAGTCTGAACCAATTGTTAAATTGCTGCAGGAAAACGCCTACCGTGAGGTTATCTG 10923 ||| || || ||||| | || || |||||| | ||||| | ||||| || | | Sbjct 19188 ACTGGAATCAGAACCTTTGGTGAAGTTGCTGGAAGAAAATGTGTACCGCGAATTGCTTCT 19247 Query 10924 GCGTCAGCGTGTTAATGAAGCTGCTCGCGCAGGCATGCTGGCTTATGCCAGAGATAGCGA 10983 ||| ||||| ||||||||||| || || || | ||| |||| ||| | | | ||| || Sbjct 19248 GCGCCAGCGCGTTAATGAAGCAGCCCGTGCGGTTATGGTGGCCTATTCAACCGGTAGTGA 19307 Query 10984 CCTCGATAATCTCGGGGCGAATTTCAATGTTGAGCGCCTGGTCGTCAGGCCTGCTGATGA 11043 || ||| | || || ||||| ||| || |||| |||| | | |||| ||| | Sbjct 19308 TCTGGATCAGCTGGGCTCGAATAACAACGTATCGCGCATGGTTTTGCGTTCTGCGGATAA 19367 Query 11044 CACCACCATccccccgacccccGCTGAAATGGAGCTTGATGCCGATTTTCGTCTGCGTAT 11103 | ||| | || || || || || | ||||| || |||||||||| | ||||| Sbjct 19368 TTCGACCGTACCGCCAACTCCTGCCGTTATGGAATCCGACAACGATTTTCGTGTCCGTAT 19427 Query 11104 ACAGCAGGCATTTGAAGGGATGAGCGTTGCGGGATCCACCGGAGCTTATGAATTTCATGG 11163 | |||||||||||||| |||||||||| || | || |||||||||| ||||| Sbjct 19428 TCCACAGGCATTTGAAGGTTTGAGCGTTGCAGGCCCGGTGGGTGCTTATGAATATCATGC 19487 Query 11164 CCGCAGTGCTGACGGGCGTGTCGCAGATATTTCTGTTATCAGCCCTTCCCCAGCATGTGT 11223 ||| ||||| || || || || |||||| || | |||||||| || || || || Sbjct 19488 CCGTAGTGCGGATGGCCGCGTTGCAGATGCATCGGCAATCAGCCCGTCACCGGCTAACGT 19547 Query 11224 CACGATATCTGTGCTTTCGCGTGAGAATAACGGTGCGGCGTCTGATGAGCTTCAGAGCAT 11283 ||| || || | | || |||| | || || | ||| || | ||||| | | || Sbjct 19548 CACAGTAACTATTATGTCCCGTGCAGACAAAGGAGTGGCATCCAAAGAGCTGCTGGAAAT 19607 Query 11284 CGTGCGCAATGCGCTGAATGCTGAGGACGTGAGGCCGGTTGCTGACCGGGTTACAGTGCA 11343 || || || ||||||| || ||||| | ||||| ||||| || | | ||| || Sbjct 19608 TGTCGAAAAAGCCCTGAATGACGAAAACGTGCGTCCGGTGGCTGATCGTCTGAAAGTCCA 19667 Query 11344 GTCAGCTCAGATTATTGACTACCAGATACGCGCAACACTTTTCGTTTATCCGGGGCCGGA 11403 |||||| ||| | || || | || || || | | | | ||| |||||| Sbjct 19668 GTCAGCGAGCATTGTGGAATATGAAATTGATGCGGTGCTGTACATCTTCCCGACGCCGGA 19727 Query 11404 AAATGAGCCGATTCGTGCGGCGGCTGAGGCGAAGCTCAAAGCTTATATCAGTGCACAGCA 11463 | ||||| || || ||| || ||| ||| || ||| ||| | || ||||| Sbjct 19728 ATCCGAGCCTATCCGCAAGGCAGCAGAGCAGAAACTGAAACACTATGTTGAAGCGCAGCA 19787 Query 11464 CAGGTTGGGGCGGGATATTCGCCTGTCAGCAATTTATGCCGCGTTGCATGTTGAGGGGGT 11523 | ||||| || |||||||| ||||||| ||||| ||||| ||||||| || || || Sbjct 19788 TCGTTTGGGACGTGATATTCGTTTGTCAGCTATTTACGCCGCACTGCATGTGGAAGGTGT 19847 Query 11524 GCAACGTGTCGAACTGGCTGCACCTGTGGCCGACATTGTGCTTGATAAAACGCAGGCATC 11583 || ||||| || ||| ||||| || ||| |||| | |||||||| ||||| || Sbjct 19848 CCAGCGTGTGGAGCTGAAAGCACCATTGAAAGACGTTGTATTGGATAAAACACAGGCTTC 19907 Query 11584 TTTTTGCAC--AGACTA-TCAGATAGTGATTGGTGGCTCCGATGAGTGATGTCCGCCTGT 11640 || |||||| | || | | || | || || || || ||||| |||| ||||| Sbjct 19908 TTATTGCACCAAAACCACACTGACA---ATGGGAGGTTCTGATGAATGAT---CGCCTTC 19961 Query 11641 TACCTGTAGGGTCATCACCTCTTGAGGTGGCTGCTGCCAGAGCCTGCGCAGATATTGAAA 11700 | || | || ||| | || | || ||||||| || | |||||| || || | | | Sbjct 19962 TGCCGATGGGTTCAACGCCGTTAGAACTGGCTGCGGCGAAAGCCTGTGCCGAGTTGCAGA 20021 Query 11701 ATACACCTGTTCCGTTACGCCGCCTGTGGAGTCCTGACACCTGTCCTGCAAATCTTT--T 11758 | | | || || || ||||||| ||| ||||||||||| || ||| || | Sbjct 20022 AGATCAAAATCCCATTGCGGGAGCTGTGGAATCCGGACACCTGTCCGGC--ATCGTTACT 20079 Query 11759 GCCGTGGCTGGCGTGGGCGTTTTCCGTTGACCGCTGGGATGAGAACTGGCCGGAAAAAAC 11818 ||| | ||||| ||||||| || || ||||||||||| || |||||| | || | || Sbjct 20080 GCCTTATCTGGCATGGGCGTGGTCTGTGGACCGCTGGGACGAAAACTGGTCTGAGAGCAC 20139 Query 11819 AAAGCGCGATGTTATTCGCAGCGCGTATTTCAC--TCACTGC-----CACAAAGGCACGA 11871 || | || || || || | ||||| | |||| |||||||| |||| Sbjct 20140 CAAAAGGGAAGTGAT---CAAGG----GTTCACTGTTCCTGCATAAACACAAAGGAACGA 20192 Query 11872 TAGGCGCTGTCAGGCGAGTTATTGAGCCGCTCGGATACATAATCAACGTTACGGAATGGT 11931 | || || || | ||||| ||||||||| | || || | ||| ||| | |||||||| Sbjct 20193 TTGGAGCCATCCGACGAGTGATTGAGCCGTTGGGTTATCTCATCCGCGTAAAGGAATGGT 20252 Query 11932 GGGAGACAGGTGACCCGGCGGGAACGTTTCGTCTTGATATCGGTGTGCTGGAAAGCGGTA 11991 || |||| || | | || || || || || ||||| ||||| ||||| ||||||| Sbjct 20253 GGCAGACCAACGATGCCCCAGGCACCTTCCGACTGGATATTGGTGTTCTGGACAGCGGTA 20312 Query 11992 TTACCGAAGAAATGTATTTAGAAATGGAGCGGTTGATTGCTGATGCGAAACCTGCGAGCC 12051 | ||| | ||||||| |||| |||| ||||| ||||| ||||| | |||| Sbjct 20313 TCACCCATGAAATGTTCGAAGAACTGGAAAACCTGATTTTCGATGCAAAACCGGTAAGCC 20372 Query 12052 GTCATTTGATTGG 12064 | ||||||||||| Sbjct 20373 GACATTTGATTGG 20385 >seq2573 Length=24683 Score = 127 bits (140), Expect = 4e-25 Identities = 195/277 (70%), Gaps = 1/277 (0%) Strand=Plus/Minus Query 9853 CGACATGGCTGAACTGGCTGACCACCCGCGCCGGTCGTTCGCGCACATGGTGGGCTCCCT 9912 |||| ||||| ||||||||||| || | || || || ||||| |||||||| ||| Sbjct 1108 CGAC-TGGCTATACTGGCTGACCTCCAGAGCAGGAAACTCCCGCACTTGGTGGGCACCCA 1050 Query 9913 CGCTCGGTGAGCAGGTGCTGCTGCTGGCAATCGGTGGCGAGCTTGATACCGCTTTCGTGC 9972 | ||||||||||| | |||| | |||||||| ||||| ||||| || || Sbjct 1049 GTGTAGGTGAGCAGGTTTTATTGCTTTCCATCGGTGGTGAGCTAACCACCGCCTTTGTAT 990 Query 9973 TGCCGGGGATTTTCTCCGACGATAACCCCGCTCCGTCTGCCTCGGCGGATGCGTGGCATG 10032 |||| | |||||||||| ||||| || || || || | || | || ||| |||| Sbjct 989 TGCCAGCGATTTTCTCCAACGATTTTCCGGCACCCTCAACATCTCCCGAAGCGACGCATA 930 Query 10033 TGGTTTTTCCTGATGGCGCGGTCATTGAGTACGAGCCGGAGACCAGTGCACTGACGGTCA 10092 || ||||| |||||||| || || ||||| || ||| | || | ||| ||||||| | Sbjct 929 CCGTATTTCCAGATGGCGCAGTGATGGAGTATGAACCGCAATCCGGCGCATTGACGGTAA 870 Query 10093 GAGGCATCAAAACTGCTGACGTGACCGCGTCGGAATC 10129 ||| || ||||| || || || || || ||||| Sbjct 869 CAGGTATTAAAACCGCCACAGTAACGGCATCAGAATC 833 >seq2600 Length=29343 Score = 118 bits (130), Expect = 2e-22 Identities = 449/697 (64%), Gaps = 17/697 (2%) Strand=Plus/Minus Query 21484 GGTGCAAAGTGCGCATATCGCATGGTCATTTTTATATCTGTATGGCCGAGTACGCGCTGC 21543 |||| |||||||| ||| ||||| |||||||||||||| || || || |||| | || Sbjct 29031 GGTGAAAAGTGCGAATACCGCATTGTCATTTTTATATCGGTGTGTCCTAGTATTCTTTGT 28972 Query 21544 AACACCAAAATATTACCGCCATTCATCATAAAGTGACTAGCGAAGGTGTGACGTAAAACG 21603 || || || ||||| || || ||||||||||||| |||||| || ||||||||||| Sbjct 28971 AAAACTAATATATTTCCACCGGACATCATAAAGTGAGAAGCGAAAGTATGACGTAAAACA 28912 Query 21604 TGGGTAAGTTGTCCTGCCGGTAGTTCGATACCTGTTCTTTCCAAAGCTGACCGGAACGCG 21663 || | ||| | | | || ||||| || |||||| | | ||| || ||||| || Sbjct 28911 TGAGATGATTGCCTTTCAGGGAGTTCAATTTCTGTTCGACCAAGAGCCGAACGGAATGCA 28852 Query 21664 CCATAACAATCACTGAACAACCGGCCCTT---TTTATCATCAGGCAGAGACTCAT---AG 21717 |||||| |||| ||||| | || || | | || | | || | Sbjct 28851 GAATAACAGGACTTGAATAACCGAGCATTACCCTTCCCTTTGGGTA---ATTCGTTTGCT 28795 Query 21718 AGCTCTTTGCTGATTGGGACGGTGCGATTTTTTCTACCTTTCGTGTTGGTGTATGTGATT 21777 | || | || ||||| | | ||||| ||||||| || || || ||||| | Sbjct 28794 AATTCATCACTAATTGGAATAGAACGATTGCGCTTACCTTTTGTCTTCGTATATGTAA-- 28737 Query 21778 TTGTATT-TCGCGAGT-TGGCTTTTTCTCAGACTCTCGGCCTCAGACCACCGTGCGCCAG 21835 ||||||| | ||| | || | | ||||| | || || || ||||| | || || | Sbjct 28736 TTGTATTATTACGAATCTGTGCTGCTGTCAGATTTTCAGCTTCTGACCATCTAGCTCCTG 28677 Query 21836 TTGCGAGACAGATTCTTACCACGGTTTCTAAATC--AGGGTGGTCATGTCGGTTACACTC 21893 |||| ||||| ||| | || ||| |||||| | || | | | | ||| || Sbjct 28676 TTGCAAGACAAATTTTAACGACGTGAATTAAATCCTTCGATGTGCTTTT--TTCACATTC 28619 Query 21894 TCCGAGCAGTTGCGAAATTTGGTCGTGAGTTAGCCAAGTCATTTCCATTTCTTCTGTGCG 21953 | || | | | ||||| || | | |||| ||| |||||| ||| || || Sbjct 28618 TGAAAGTAATAACCTAATTTCATCATCATTTAGAAAAGCCATTTCTTGTTCATCAGTTTT 28559 Query 21954 GAATGGGCGCATATTTTTTAGTGGGTTTTCACCCTTCCATTCTCCGAGGCGGTTTAGCTC 22013 ||| || | ||| | |||| ||| |||||| | || || ||| ||| Sbjct 28558 ATATGAACGAACTTTTGCCAACGGGTGTTCTTTTGCCCATTCATCCAGTCGAATTAACTC 28499 Query 22014 ATTGAACACCGCCCGGAAGTAGGCCAGCTCAAGATTAAGCGTGCGAGGCGATACCTCTTT 22073 |||||||| |||| ||||| || || || | ||||| |||||| || | || ||| Sbjct 28498 ATTGAACATTGCCCTAAAGTAAGCTAGTTCTAAATTAACCGTGCGTGGAGTAACTGTTTT 28439 Query 22074 CACTCTGTTTGAACGGGCATACTCACCTTTTAACCGTTTTTCTCGGTAGCGGGAAAACAT 22133 | ||| | || || | | ||||| | || || ||||| || || ||||||| || Sbjct 28438 TAATCTATCTGTTCGTGTAATTTCACCACTCAAACGCTTTTCACGATATAGGGAAAAAAT 28379 Query 22134 CTGCGCATCGAAATCGCGTGCGAGTGGTTCGCCCATA 22170 || |||| || || ||||| || || |||||| Sbjct 28378 CTTGGCATTAAATTCAGTGGCGAGAGGGTCTCCCATA 28342 Score = 107 bits (118), Expect = 4e-19 Identities = 403/625 (64%), Gaps = 18/625 (3%) Strand=Plus/Minus Query 27612 CTAATCCAGCAATACGCCGCTGTGAGCTGATGGCCCGCATTCGTGGGTTTGAAAATATCT 27671 ||||||| || | || || ||||| |||||| || || ||||| ||||||||| | Sbjct 24110 CTAATCCTGCGGTGCGTCGTTGTGAATTGATGGTACGTATGCGTGGATTTGAAAATTTAG 24051 Query 27672 GTAATGAGCTCGGTTATGTCGGGGAGTTCTATACTCTGACTGCACCGTCTAAATATCACG 27731 | |||| | || |||||||| ||||| ||||| ||||||| || ||||||||||| Sbjct 24050 CTGATGATATGGGGTATGTCGGTGAGTTTTATACAATGACTGCGCCATCTAAATATCATA 23991 Query 27732 CCACCACCA--AAGCGGGCTACCGTAACAGCAAATGGAACGGTGCAAGCCCGTCAGACAC 27789 | || ||| | | | || | | | | ||||| || || || || | Sbjct 23990 ATGCATACAGTAAGGGTGGTTTTGT-AGATC-AGTGGAATGGCTGTAGTCCACGCGATGC 23933 Query 27790 GCAGAGCTATCT---CACAGGCCTTTGGGCACGCATACGCGCCAAGCTGCACCGGGAAGA 27846 || | ||||| || | ||| || || || || || | |||| Sbjct 23932 ACAAAAATATCTTTGCAATG---TTTTTTCAAAAATTCGTGCTGAGTATGGGAGAAAAGA 23876 Query 27847 AATCCGCATTTTCGGAATACGCGTCGCTGAACCGCATCACGATGGAACGCCGCACTGGCA 27906 ||| || |||||| | | || | |||||||||||| || || || || |||||||| Sbjct 23875 AATTCGACCATTCGGATTTAGAGTTGTTGAACCGCATCATGACGGTACTCCCCACTGGCA 23816 Query 27907 TATGCT--TAT--GTTCATGTTGCCGGAAGATGTCGAGCGTGTGCGACTCATCATCCGAG 27962 | || | ||| |||||| || || ||| || | || ||| | | Sbjct 23815 TTTGTTGCTATTCGTTCAT----CCAGACCATGCGGAAACACTAAGAAATATCTTTGCTG 23760 Query 27963 ATTATGCGTGGGAGGAAGACCACTACGAACTGAGAAGCGATAAAGCCAAAAAGGCGCGCT 28022 | ||||| | || ||||| || | ||| | || || || |||| ||||| ||||||| Sbjct 23759 AATATGCACGTGAAGAAGATAACGAGGAATTAAGCAGTGAAGAAGCTAAAAAAGCGCGCT 23700 Query 28023 TCCATGCTGAGGCCATTGACCCGGAAAAAGGCAGTGCTACTGGCTATGTCGCTAAATACA 28082 | ||||| | | || || || ||||| ||||| || || ||| |||||||||| | Sbjct 23699 TTCATGCAGTCCCTATCGATAAAGAGAAAGGTAGTGCGACAGGTTATATCGCTAAATATA 23640 Query 28083 TTTCCAAAAATATCGACGGTTATGCTCTCGATGGTGAAACCGATGACGAAAGTGGTGAGT 28142 |||| |||||||| || |||||||| || |||| || | || ||| |||| | Sbjct 23639 TTTCTAAAAATATAGATGGTTATGCCCTAGATGAAGATATTGACTTGGAATCTGGTAAAA 23580 Query 28143 TGTTAAAAGAGACTGCACCCGCCGTTTCAGCATGGGCGGCGCGCTGGCACATCCGTCAGT 28202 | ||||| | || |||| || |||||||| || ||| | || || || | Sbjct 23579 GCTGCAAAGATATAGCCAAAAATATTTCGGCTTGGGCGGCTCGTTGGAAAATTCGACAAT 23520 Query 28203 TTCAATTTATCGGCGGTGCGCCGGT 28227 |||| || ||||||||||| || Sbjct 23519 TTCAGCAAATAGGCGGTGCGCCTGT 23495 Score = 87.8 bits (96), Expect = 4e-13 Identities = 84/104 (81%), Gaps = 4/104 (4%) Strand=Plus/Minus Query 20930 AACAAAAAGGCCACTCG--AGAGAGTGGCCTAACTGTATGTATTTACTA-CTTAAATTTG 20986 |||||||| |||||| | | |||||| ||| ||| ||||| | || ||||||| Sbjct 134 AACAAAAAAGCCACTTTTTACAAAGTGGCTTAA-TGTGCTGATTTAACAGCTAAAATTTG 76 Query 20987 GTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGT 21030 ||||||||| ||||||||||||||| |||||| ||||||||||| Sbjct 75 GTGGCCCCTACTGGACTTGAACCAGTGACCAATCGATTATGAGT 32 >seq2689 Length=1181 Score = 89.7 bits (98), Expect = 1e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 11893 TTGAGCCGCTCGGATACATAATCAACGTTACGGAATGGTGGGAGACAGGTGACCCGGCGG 11952 |||| ||| |||| || |||| | ||| ||||||||| ||| || || || | | Sbjct 1179 TTGAACCGTTCGGCTATTTAATTCGCCTTATTGAATGGTGGCAGAACGGCGATGCGCCCG 1120 Query 11953 GAACGTTTCGTCTTGATATCGGTGTGCTGGAAAGCGGTATTACCGAAGAAATGTATTTAG 12012 | || || || || |||||||| ||| |||| | ||| || ||||||| | ||| | Sbjct 1119 GCACCTTCCGGCTGGATATCGGCGTGATGGACACCGGCATCACCGAAGCCACCTATCACG 1060 Query 12013 AAATGGAGCGGTTGATTGCTGATGCGAAACCTGCGAGCCGTCATTTGATTGG 12064 | |||| ||| ||||| |||||||||||| || ||| ||| ||||||| Sbjct 1059 AGCTGGAACGGCTGATTTTTGATGCGAAACCCGCTTCCCGCCATCTGATTGG 1008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97871871264448