Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq416 87.8 2e-12 >seq416 Length=5154 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 146125 AGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTG 146184 || ||| | || || ||||| | ||||| ||||||||||| |||||| || | || Sbjct 2386 AGAAAGGCACGAGATCCGTTCGGATCCCAAATCTTGACGCCTTTCGCGGCCAGGTTCTTT 2327 Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244 | || |||| | | | ||||||||| | || ||||||| | || ||||||||||| Sbjct 2326 GCGTTCGTGTCCGCGCGGATGAACCAAATGAGTTCTTCGACAATTCCTCTCCAGAAGACG 2267 Query 146245 CTCTTGGTGGTCAGCAGGGGGA-ACTGGCCCCGC--AGGGAGTACTTGGCCTGGTC--CC 146299 | ||| ||||| | || || | || | |||| |||||||||||||| | || || Sbjct 2266 CGCTTCGTGGTAAAGAGTGGTATGGTGCCACCGCGGAGGGAGTACTTGGC--GATCATCC 2209 Query 146300 CGAAGA--CGGACAGGGTGCCCACGCCCGTCCTGTCCCCCCTGCGCACCCCGTTCGCCAG 146357 |||| | | |||| ||||| || || | || || || |||| |||||| ||| Sbjct 2208 CGAACACTCCGACA--GTGCCGGTTCCAGTGCGATCGCCTCTCCGCAGGCCGTTCTTCAG 2151 Query 146358 GAT 146360 ||| Sbjct 2150 GAT 2148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590055675250560