Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20scapterisci_20[genbank_20GCA_5F000757745.1_202014-09- 24] 2,864 sequences; 79,651,268 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq2680 107 5e-19 >seq2680 Length=520 Score = 107 bits (118), Expect = 5e-19 Identities = 217/322 (67%), Gaps = 0/322 (0%) Strand=Plus/Minus Query 16924 ACCCGGATAAATATGCCCGTATCGATACCGGAGCCATCATTGACCAACGGCCGGTGAGCG 16983 ||||||||||||| |||| |||||| ||||| | |||||| |||||||| | | Sbjct 453 ACCCGGATAAATACGCCCATATCGACACCGGTATCCGCATTGATGAACGGCCGATTTCGG 394 Query 16984 TGATCCCGCCGGGCAACCAGTCGCCGCCTGCGAATATCGTGATCAGCTCGTTTTCCGTGG 17043 | ||||| ||||| ||||| ||||| || | ||||||||| ||| |||| Sbjct 393 TTATCCCACCGGGAGTACAGTCACCGCCGAAAAACGTGGTGATCAGCAGTAGTTCGGTGG 334 Query 17044 TTCAGCAAAATATCAGCGTCGAAACAATGCGCGTGAGCTGGGACCAGGCGCAGAACGCTA 17103 | || || || | || || ||| ||||||||| || | || | |||| Sbjct 333 TGCATCAGGGAATTGCCATCACCACCTTGCAGGTGAGCTGGTCGGCGGTGGAGCAGGCTA 274 Query 17104 TCGCCTATGAAGCGCAATGGCGCCGCAACGACGGGAACTGGGTTAACGTGCCGCGCACCT 17163 | || |||||||| | ||||| || | | || |||||| | || ||||| ||| Sbjct 273 TTGCTTATGAAGCTGAGTGGCGGCGGGATAATGGCAACTGGATAGCCGCCCCGCGAACCG 214 Query 17164 CCACCACGTCATTCGACGTCCCGGGGATTTATGCCGGGCGCTACCTGGTGCGGGTGCGCG 17223 |||| || || || || ||| || || ||||| ||||| | || |||||||| | Sbjct 213 CCACACCGGGTTTTGAGGTGCCGAATATCTACGCCGGACGCTATCAGGCTCGGGTGCGGG 154 Query 17224 CAATCAATGCCGCAGAAATTTC 17245 | || || ||||| || ||||| Sbjct 153 CGATTAACGCCGCTGAGATTTC 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127016480022592